Strain Fitness in Pseudomonas sp. S08-1 around OH686_05085

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
1,041,338	+		OH686_05080	0.54	+0.2
1,041,339	-		OH686_05080	0.55	+1.1
1,041,531	+		OH686_05080	0.80	-1.3
1,041,629	-				-0.5
1,041,729	+				-2.4
1,041,729	+				-3.0
1,041,729	+				-0.4
1,041,729	+				-1.0
1,041,729	+				-0.5
1,041,729	+				-1.5
1,041,729	+				-0.0
1,041,730	-				-0.7
1,041,730	-				-0.8
1,041,730	-				+0.8
1,041,730	-				-1.1
1,041,730	-				+0.6
1,041,730	-				+0.1
1,041,730	-				-0.7
1,041,730	-				-0.9
1,041,730	-				-1.6
1,041,730	-				-1.9
1,041,730	-				-0.7
1,041,730	-				-2.4
1,041,730	-				+0.1
1,041,730	-				-2.0
1,041,730	-				-1.6
1,041,730	-				-0.4
1,041,730	-				-1.1
1,042,032	+		OH686_05085	0.46	+1.5
1,042,032	+		OH686_05085	0.46	-0.4
1,042,033	-		OH686_05085	0.46	-1.4
1,042,089	+		OH686_05085	0.53	-1.4
1,042,089	+		OH686_05085	0.53	-1.8
1,042,089	+		OH686_05085	0.53	-1.4
1,042,090	-		OH686_05085	0.53	-2.0
1,042,257	+		OH686_05085	0.75	-0.8
1,042,257	+		OH686_05085	0.75	+0.3
1,042,257	+		OH686_05085	0.75	-0.9
1,042,257	+		OH686_05085	0.75	-2.9
1,042,257	+		OH686_05085	0.75	-1.1
1,042,257	+		OH686_05085	0.75	-0.8
1,042,257	+		OH686_05085	0.75	+0.1
1,042,257	+		OH686_05085	0.75	-0.6
1,042,257	+		OH686_05085	0.75	-0.6
1,042,257	+		OH686_05085	0.75	-0.9
1,042,257	+		OH686_05085	0.75	-2.5
1,042,257	+		OH686_05085	0.75	-0.6
1,042,257	+		OH686_05085	0.75	-0.7
1,042,257	+		OH686_05085	0.75	-1.6
1,042,258	-		OH686_05085	0.75	+0.1
1,042,258	-		OH686_05085	0.75	-1.1
1,042,258	-		OH686_05085	0.75	-1.6
1,042,258	-		OH686_05085	0.75	-1.8
1,042,258	-		OH686_05085	0.75	-1.1
1,042,258	-		OH686_05085	0.75	-1.5
1,042,258	-		OH686_05085	0.75	-0.9
1,042,258	-		OH686_05085	0.75	-2.3
1,042,258	-		OH686_05085	0.75	-0.3
1,042,258	-		OH686_05085	0.75	-0.6
1,042,258	-		OH686_05085	0.75	+0.2
1,042,258	-		OH686_05085	0.75	-1.2
1,042,258	-		OH686_05085	0.75	-1.3
1,042,261	+		OH686_05085	0.76	-1.2
1,042,262	-		OH686_05085	0.76	-0.1
1,042,262	-		OH686_05085	0.76	+0.4
1,042,262	-		OH686_05085	0.76	-1.2
1,042,262	-		OH686_05085	0.76	+1.2
1,042,262	-		OH686_05085	0.76	-0.6
1,042,262	-		OH686_05085	0.76	-1.4
1,042,286	+		OH686_05085	0.79	-0.2
1,042,286	+		OH686_05085	0.79	+1.5
1,042,286	+		OH686_05085	0.79	-2.3
1,042,286	+		OH686_05085	0.79	-1.5
1,042,286	+		OH686_05085	0.79	-0.8
1,042,286	+		OH686_05085	0.79	+0.1
1,042,286	+		OH686_05085	0.79	-1.4
1,042,286	+		OH686_05085	0.79	+0.3
1,042,286	+		OH686_05085	0.79	-0.1
1,042,286	+		OH686_05085	0.79	-0.2
1,042,287	-		OH686_05085	0.79	-0.5
1,042,287	-		OH686_05085	0.79	-0.7
1,042,287	-		OH686_05085	0.79	-2.5
1,042,287	-		OH686_05085	0.79	-1.1
1,042,287	-		OH686_05085	0.79	-1.0
1,042,287	-		OH686_05085	0.79	-2.0
1,042,287	-		OH686_05085	0.79	-0.8
1,042,287	-		OH686_05085	0.79	-1.5
1,042,287	-		OH686_05085	0.79	-1.1
1,042,287	-		OH686_05085	0.79	-1.5
1,042,290	+		OH686_05085	0.80	-1.5
1,042,290	+		OH686_05085	0.80	+0.1
1,042,290	+		OH686_05085	0.80	-2.8
1,042,290	+		OH686_05085	0.80	-1.2
1,042,290	+		OH686_05085	0.80	-1.2
1,042,290	+		OH686_05085	0.80	-1.1
1,042,290	+		OH686_05085	0.80	-1.7
1,042,291	-		OH686_05085	0.80	-2.2
1,042,291	-		OH686_05085	0.80	+0.0
1,042,291	-		OH686_05085	0.80	+1.0
1,042,291	-		OH686_05085	0.80	+0.8
1,042,291	-		OH686_05085	0.80	-0.6
1,042,291	-		OH686_05085	0.80	-1.3
1,042,291	-		OH686_05085	0.80	-0.2
1,042,302	+		OH686_05085	0.81	-0.7
1,042,302	+		OH686_05085	0.81	+0.5
1,042,302	+		OH686_05085	0.81	+0.4
1,042,302	+		OH686_05085	0.81	-1.1
1,042,302	+		OH686_05085	0.81	-0.4
1,042,302	+		OH686_05085	0.81	-1.6
1,042,302	+		OH686_05085	0.81	-1.4
1,042,302	+		OH686_05085	0.81	-1.2
1,042,302	+		OH686_05085	0.81	-0.9
1,042,302	+		OH686_05085	0.81	-0.2
1,042,303	-		OH686_05085	0.81	+0.3
1,042,303	-		OH686_05085	0.81	-1.2
1,042,303	-		OH686_05085	0.81	-0.6
1,042,303	-		OH686_05085	0.81	-1.5
1,042,303	-		OH686_05085	0.81	-0.2
1,042,303	-		OH686_05085	0.81	+0.5
1,042,303	-		OH686_05085	0.81	-1.6
1,042,303	-		OH686_05085	0.81	-0.5
1,042,303	-		OH686_05085	0.81	-1.3
1,042,303	-		OH686_05085	0.81	-0.1
1,042,406	+				-0.4
1,042,406	+				-1.4
1,042,407	-				-1.0
1,042,407	-				-0.5
1,042,407	-				-1.6
1,042,412	+				-0.4
1,042,412	+				-1.4
1,042,413	-				-0.6
1,042,416	+				-1.7
1,042,416	+				-1.1
1,042,416	+				-2.4
1,042,416	+				-0.4
1,042,416	+				-1.7
1,042,416	+				-1.4
1,042,416	+				-0.2
1,042,416	+				-2.1
1,042,416	+				-0.3
1,042,416	+				-1.1
1,042,416	+				-0.9
1,042,416	+				-0.2
1,042,416	+				-0.1
1,042,416	+				-1.3
1,042,416	+				-0.7
1,042,416	+				-3.1
1,042,416	+				-0.7
1,042,416	+				-1.5
1,042,416	+				-0.9
1,042,417	-				-1.5
1,042,417	-				-0.7
1,042,417	-				-1.6
1,042,417	-				-0.6
1,042,417	-				-2.0
1,042,417	-				-2.4
1,042,417	-				-0.6
1,042,417	-				-1.4
1,042,417	-				-0.5
1,042,417	-				-1.2
1,042,417	-				-1.6
1,042,417	-				-0.8
1,042,417	-				-0.4
1,042,417	-				-1.7
1,042,417	-				+0.1
1,042,417	-				-0.6
1,042,417	-				-0.4
1,042,417	-				-1.5
1,042,417	-				-1.3
1,042,417	-				-0.4
1,042,417	-				-0.6
1,042,417	-				-0.4
1,042,443	+				-0.2
1,042,443	+				-0.0
1,042,503	+				-0.3
1,042,503	+				+0.5
1,042,503	+				+0.8
1,042,503	+				+0.2
1,042,503	+				+0.3
1,042,503	+				-0.5
1,042,504	-				-1.0
1,042,504	-				+0.5
1,042,504	-				+0.7
1,042,504	-				+0.3
1,042,504	-				+0.9
1,042,507	+				+0.7
1,042,507	+				-0.1
1,042,507	+				+0.4
1,042,507	+				-0.4
1,042,508	-				-0.4
1,042,508	-				-1.5
1,042,508	-				-0.2
1,042,508	-				-0.6
1,042,508	-				+0.0
1,042,508	-				-0.7
1,042,508	-				-0.6
1,042,508	-				+0.4
1,042,508	-				-1.6
1,042,508	-				+0.1
1,042,527	-				+0.3
1,042,535	+				+1.1
1,042,535	+				+0.7
1,042,536	-				+0.4
1,042,536	-				+0.9
1,042,536	-				+0.6
1,042,536	-				-1.4
1,042,560	+				-0.3
1,042,616	+				+0.6
1,042,616	+				+0.7
1,042,616	+				-0.3
1,042,617	-				+1.1
1,042,617	-				+0.8
1,042,627	-				+1.1
1,042,627	-				+1.6
1,042,627	-				-0.5
1,042,627	-				-1.3
1,042,627	-				-1.7
1,042,732	+				+0.2
1,042,732	+				+0.4
1,042,732	+				-0.9
1,042,733	-				+0.3
1,042,733	-				-0.9
1,042,733	-				+0.3
1,042,733	-				-0.6
1,042,733	-				+0.2
1,042,739	+				+0.3
1,042,740	-				-0.1
1,042,740	-				-0.5
1,042,770	+		OH686_05090	0.12	-0.2
1,042,770	+		OH686_05090	0.12	-1.9
1,042,770	+		OH686_05090	0.12	-1.5
1,042,770	+		OH686_05090	0.12	-0.1
1,042,770	+		OH686_05090	0.12	+0.8
1,042,771	-		OH686_05090	0.12	-0.7
1,042,771	-		OH686_05090	0.12	-0.2
1,042,771	-		OH686_05090	0.12	+0.2
1,042,771	-		OH686_05090	0.12	+1.4
1,042,771	-		OH686_05090	0.12	+1.1
1,042,771	-		OH686_05090	0.12	-1.1
1,042,771	-		OH686_05090	0.12	-0.2
1,042,771	-		OH686_05090	0.12	-0.5
1,042,771	-		OH686_05090	0.12	+0.1
1,042,771	-		OH686_05090	0.12	-0.3
1,042,771	-		OH686_05090	0.12	+0.8
1,042,869	+		OH686_05090	0.22	-1.1
1,042,870	-		OH686_05090	0.22	-0.0
1,042,870	-		OH686_05090	0.22	-0.7
1,042,894	+		OH686_05090	0.24	-0.5
1,042,894	+		OH686_05090	0.24	+0.8
1,042,911	-		OH686_05090	0.26	+0.3
1,042,911	-		OH686_05090	0.26	-1.6
1,042,911	-		OH686_05090	0.26	+0.8
1,042,911	-		OH686_05090	0.26	-0.6
1,042,924	+		OH686_05090	0.27	+0.9
1,042,924	+		OH686_05090	0.27	-1.1
1,042,924	+		OH686_05090	0.27	-0.8
1,042,925	-		OH686_05090	0.27	-1.2
1,042,957	+		OH686_05090	0.30	+0.3
1,042,990	+		OH686_05090	0.34	+0.5
1,042,990	+		OH686_05090	0.34	-0.8
1,042,990	+		OH686_05090	0.34	+0.3
1,042,990	+		OH686_05090	0.34	+0.2
1,042,990	+		OH686_05090	0.34	-2.0
1,042,990	+		OH686_05090	0.34	+0.9
1,042,991	-		OH686_05090	0.34	-0.9
1,042,991	-		OH686_05090	0.34	-0.2
1,042,994	-		OH686_05090	0.34	+0.3
1,042,994	-		OH686_05090	0.34	+0.9
1,043,017	+		OH686_05090	0.36	-1.0
1,043,017	+		OH686_05090	0.36	-0.6
1,043,017	+		OH686_05090	0.36	+0.9
1,043,017	+		OH686_05090	0.36	-1.5
1,043,017	+		OH686_05090	0.36	-0.4
1,043,017	+		OH686_05090	0.36	+0.2
1,043,018	-		OH686_05090	0.36	-0.6
1,043,018	-		OH686_05090	0.36	-1.0
1,043,018	-		OH686_05090	0.36	-0.1
1,043,018	-		OH686_05090	0.36	-1.0
1,043,018	-		OH686_05090	0.36	-0.8
1,043,018	-		OH686_05090	0.36	+0.4
1,043,018	-		OH686_05090	0.36	+0.2
1,043,018	-		OH686_05090	0.36	+0.3
1,043,018	-		OH686_05090	0.36	+0.9
1,043,018	-		OH686_05090	0.36	-0.4
1,043,072	+		OH686_05090	0.42	+0.4
1,043,073	-		OH686_05090	0.42	-0.1
1,043,090	-		OH686_05090	0.44	-2.1
1,043,124	+		OH686_05090	0.47	+0.4
1,043,124	+		OH686_05090	0.47	+1.7
1,043,125	-		OH686_05090	0.47	+0.8
1,043,125	-		OH686_05090	0.47	+0.5
1,043,125	-		OH686_05090	0.47	+1.4
1,043,125	-		OH686_05090	0.47	+0.0
1,043,125	-		OH686_05090	0.47	-0.3
1,043,149	-		OH686_05090	0.49	-0.5
1,043,149	-		OH686_05090	0.49	+0.3
1,043,149	-		OH686_05090	0.49	+1.1
1,043,149	-		OH686_05090	0.49	+1.0
1,043,149	-		OH686_05090	0.49	+0.3
1,043,149	-		OH686_05090	0.49	-1.2
1,043,168	+		OH686_05090	0.51	+0.5
1,043,168	+		OH686_05090	0.51	-0.3
1,043,168	+		OH686_05090	0.51	-0.6
1,043,169	-		OH686_05090	0.51	+0.5
1,043,169	-		OH686_05090	0.51	+0.5
1,043,169	-		OH686_05090	0.51	-0.5
1,043,183	-		OH686_05090	0.53	+1.8
1,043,204	+		OH686_05090	0.55	+0.6
1,043,205	-		OH686_05090	0.55	+0.8
1,043,211	+		OH686_05090	0.55	+0.8
1,043,211	+		OH686_05090	0.55	+1.7
1,043,211	+		OH686_05090	0.55	-2.6
1,043,211	+		OH686_05090	0.55	+0.2
1,043,212	-		OH686_05090	0.56	+1.4
1,043,212	-		OH686_05090	0.56	+1.3
1,043,212	-		OH686_05090	0.56	+0.4
1,043,212	-		OH686_05090	0.56	-0.0
1,043,212	-		OH686_05090	0.56	+0.5
1,043,212	-		OH686_05090	0.56	+0.2
1,043,215	-		OH686_05090	0.56	+0.2
1,043,215	-		OH686_05090	0.56	-1.3
1,043,317	-		OH686_05090	0.66	+1.2
1,043,317	-		OH686_05090	0.66	+1.1
1,043,351	+		OH686_05090	0.69	+0.2
1,043,361	+		OH686_05090	0.70	-1.5
1,043,362	-		OH686_05090	0.70	-0.9
1,043,409	+		OH686_05090	0.75	-0.3
1,043,410	-		OH686_05090	0.75	-0.7
1,043,410	-		OH686_05090	0.75	-0.7
1,043,410	-		OH686_05090	0.75	+0.2
1,043,420	+		OH686_05090	0.76	+0.0