Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_02015 and OH686_02020 are separated by 146 nucleotides OH686_02020 and OH686_02025 are separated by 67 nucleotides OH686_02025 and OH686_02030 are separated by 81 nucleotides
OH686_02015: OH686_02015 - 2-hydroxy-3-oxopropionate reductase , at 432,361 to 433,233
_02015
OH686_02020: OH686_02020 - Inhibitor of the KinA pathway to sporulation, predicted exonuclease, at 433,380 to 433,922
_02020
OH686_02025: OH686_02025 - Pyrimidine/purine nucleoside phosphorylase PpnP, at 433,990 to 434,271
_02025
OH686_02030: OH686_02030 - Threonine/homoserine exporter RhtA, at 434,353 to 435,210
_02030
Position (kb) 433
434 Strain fitness (log2 ratio) -2
-1
0
1
2 at 432.400 kb on - strand at 432.437 kb on + strand at 432.437 kb on + strand at 432.437 kb on + strand at 432.437 kb on + strand at 432.437 kb on + strand at 432.437 kb on + strand at 432.437 kb on + strand at 432.438 kb on - strand at 432.438 kb on - strand at 432.438 kb on - strand at 432.438 kb on - strand at 432.438 kb on - strand at 432.770 kb on + strand, within OH686_02015 at 432.770 kb on + strand, within OH686_02015 at 432.770 kb on + strand, within OH686_02015 at 432.770 kb on + strand, within OH686_02015 at 432.771 kb on - strand, within OH686_02015 at 432.771 kb on - strand, within OH686_02015 at 432.799 kb on - strand, within OH686_02015 at 432.799 kb on - strand, within OH686_02015 at 432.799 kb on - strand, within OH686_02015 at 432.799 kb on - strand, within OH686_02015 at 432.800 kb on + strand, within OH686_02015 at 432.800 kb on + strand, within OH686_02015 at 432.800 kb on + strand, within OH686_02015 at 432.800 kb on + strand, within OH686_02015 at 432.801 kb on - strand, within OH686_02015 at 432.801 kb on - strand, within OH686_02015 at 432.948 kb on + strand, within OH686_02015 at 432.948 kb on + strand, within OH686_02015 at 432.948 kb on + strand, within OH686_02015 at 432.948 kb on + strand, within OH686_02015 at 432.948 kb on + strand, within OH686_02015 at 432.949 kb on - strand, within OH686_02015 at 432.949 kb on - strand, within OH686_02015 at 432.949 kb on - strand, within OH686_02015 at 432.949 kb on - strand, within OH686_02015 at 432.949 kb on - strand, within OH686_02015 at 433.145 kb on + strand, within OH686_02015 at 433.145 kb on + strand, within OH686_02015 at 433.145 kb on + strand, within OH686_02015 at 433.146 kb on - strand at 433.146 kb on - strand at 433.146 kb on - strand at 433.146 kb on - strand at 433.146 kb on - strand at 433.215 kb on + strand at 433.215 kb on + strand at 433.215 kb on + strand at 433.216 kb on - strand at 433.216 kb on - strand at 433.216 kb on - strand at 433.216 kb on - strand at 433.238 kb on + strand at 433.238 kb on + strand at 433.238 kb on + strand at 433.238 kb on + strand at 433.238 kb on + strand at 433.239 kb on - strand at 433.239 kb on - strand at 433.239 kb on - strand at 433.239 kb on - strand at 433.239 kb on - strand at 433.239 kb on - strand at 433.239 kb on - strand at 433.239 kb on - strand at 433.267 kb on - strand at 433.267 kb on - strand at 433.350 kb on + strand at 433.350 kb on + strand at 433.350 kb on + strand at 433.350 kb on + strand at 433.350 kb on + strand at 433.350 kb on + strand at 433.351 kb on - strand at 433.351 kb on - strand at 433.351 kb on - strand at 433.351 kb on - strand at 433.379 kb on + strand at 433.379 kb on + strand at 433.380 kb on - strand at 433.380 kb on - strand at 433.571 kb on + strand, within OH686_02020 at 433.571 kb on + strand, within OH686_02020 at 433.686 kb on + strand, within OH686_02020 at 433.687 kb on - strand, within OH686_02020 at 433.909 kb on + strand at 433.909 kb on + strand at 433.909 kb on + strand at 433.909 kb on + strand at 433.910 kb on - strand at 433.910 kb on - strand at 433.910 kb on - strand at 433.910 kb on - strand at 433.910 kb on - strand at 433.951 kb on + strand at 433.951 kb on + strand at 433.952 kb on - strand at 434.008 kb on + strand at 434.008 kb on + strand at 434.008 kb on + strand at 434.008 kb on + strand at 434.009 kb on - strand at 434.009 kb on - strand at 434.009 kb on - strand at 434.009 kb on - strand at 434.025 kb on + strand, within OH686_02025 at 434.025 kb on + strand, within OH686_02025 at 434.025 kb on + strand, within OH686_02025 at 434.026 kb on - strand, within OH686_02025 at 434.026 kb on - strand, within OH686_02025 at 434.026 kb on - strand, within OH686_02025 at 434.089 kb on + strand, within OH686_02025 at 434.090 kb on - strand, within OH686_02025 at 434.090 kb on - strand, within OH686_02025 at 434.251 kb on + strand at 434.252 kb on - strand at 434.252 kb on - strand at 434.252 kb on - strand at 434.274 kb on + strand at 434.274 kb on + strand at 434.274 kb on + strand at 434.275 kb on - strand at 434.275 kb on - strand at 434.275 kb on - strand at 434.275 kb on - strand at 434.279 kb on + strand at 434.279 kb on + strand at 434.279 kb on + strand at 434.279 kb on + strand at 434.280 kb on - strand at 434.280 kb on - strand at 434.280 kb on - strand at 434.329 kb on + strand at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.605 kb on + strand, within OH686_02030 at 434.606 kb on - strand, within OH686_02030 at 434.606 kb on - strand, within OH686_02030 at 434.606 kb on - strand, within OH686_02030 at 434.606 kb on - strand, within OH686_02030 at 434.606 kb on - strand, within OH686_02030 at 434.606 kb on - strand, within OH686_02030 at 434.606 kb on - strand, within OH686_02030 at 434.606 kb on - strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.827 kb on + strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030 at 434.828 kb on - strand, within OH686_02030
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 432,400 - +1.2 432,437 + -0.1 432,437 + +0.1 432,437 + +0.4 432,437 + +2.1 432,437 + +0.5 432,437 + -0.8 432,437 + +0.2 432,438 - -0.3 432,438 - -0.3 432,438 - +0.3 432,438 - -0.8 432,438 - +0.2 432,770 + OH686_02015 0.47 -0.3 432,770 + OH686_02015 0.47 -0.2 432,770 + OH686_02015 0.47 -0.3 432,770 + OH686_02015 0.47 +0.4 432,771 - OH686_02015 0.47 -0.8 432,771 - OH686_02015 0.47 -0.5 432,799 - OH686_02015 0.50 +0.3 432,799 - OH686_02015 0.50 +0.7 432,799 - OH686_02015 0.50 -0.2 432,799 - OH686_02015 0.50 +0.6 432,800 + OH686_02015 0.50 +0.5 432,800 + OH686_02015 0.50 -0.5 432,800 + OH686_02015 0.50 +0.1 432,800 + OH686_02015 0.50 -0.5 432,801 - OH686_02015 0.50 -0.2 432,801 - OH686_02015 0.50 -0.6 432,948 + OH686_02015 0.67 +0.6 432,948 + OH686_02015 0.67 +0.2 432,948 + OH686_02015 0.67 -0.1 432,948 + OH686_02015 0.67 -0.0 432,948 + OH686_02015 0.67 -0.2 432,949 - OH686_02015 0.67 +0.6 432,949 - OH686_02015 0.67 +0.8 432,949 - OH686_02015 0.67 -0.5 432,949 - OH686_02015 0.67 -0.5 432,949 - OH686_02015 0.67 +0.3 433,145 + OH686_02015 0.90 -1.2 433,145 + OH686_02015 0.90 +0.6 433,145 + OH686_02015 0.90 -0.2 433,146 - -0.8 433,146 - +1.4 433,146 - -0.2 433,146 - -0.1 433,146 - -1.1 433,215 + +0.5 433,215 + +0.3 433,215 + -0.8 433,216 - -0.3 433,216 - +0.1 433,216 - -1.4 433,216 - -1.3 433,238 + +0.7 433,238 + +0.8 433,238 + +0.4 433,238 + +0.3 433,238 + +0.1 433,239 - +0.1 433,239 - +0.1 433,239 - -0.9 433,239 - +0.2 433,239 - +0.1 433,239 - -0.3 433,239 - -0.2 433,239 - +0.5 433,267 - -0.7 433,267 - +0.1 433,350 + +1.6 433,350 + -0.2 433,350 + -0.5 433,350 + -0.9 433,350 + -2.1 433,350 + +0.8 433,351 - -1.0 433,351 - -0.3 433,351 - +0.1 433,351 - -0.0 433,379 + +0.0 433,379 + +0.1 433,380 - +0.8 433,380 - +0.0 433,571 + OH686_02020 0.35 -0.9 433,571 + OH686_02020 0.35 -0.4 433,686 + OH686_02020 0.56 +0.4 433,687 - OH686_02020 0.57 -1.1 433,909 + +0.4 433,909 + -0.5 433,909 + -1.6 433,909 + -0.2 433,910 - +0.4 433,910 - -1.5 433,910 - -0.3 433,910 - -0.5 433,910 - +0.0 433,951 + -0.3 433,951 + -0.8 433,952 - -0.9 434,008 + -0.3 434,008 + -0.2 434,008 + -0.3 434,008 + -1.4 434,009 - -0.8 434,009 - -0.8 434,009 - -0.0 434,009 - +0.6 434,025 + OH686_02025 0.12 -1.2 434,025 + OH686_02025 0.12 +0.9 434,025 + OH686_02025 0.12 -1.0 434,026 - OH686_02025 0.13 -0.5 434,026 - OH686_02025 0.13 +0.3 434,026 - OH686_02025 0.13 +0.5 434,089 + OH686_02025 0.35 -0.5 434,090 - OH686_02025 0.35 -0.5 434,090 - OH686_02025 0.35 +1.0 434,251 + +1.1 434,252 - +0.5 434,252 - +0.1 434,252 - -0.5 434,274 + +1.1 434,274 + +0.1 434,274 + -0.7 434,275 - +1.1 434,275 - +1.1 434,275 - +0.4 434,275 - -1.1 434,279 + -2.3 434,279 + -0.1 434,279 + -0.1 434,279 + -0.5 434,280 - -0.3 434,280 - -0.2 434,280 - +0.7 434,329 + -0.8 434,605 + OH686_02030 0.29 -0.5 434,605 + OH686_02030 0.29 -0.9 434,605 + OH686_02030 0.29 +0.3 434,605 + OH686_02030 0.29 +0.5 434,605 + OH686_02030 0.29 +0.8 434,605 + OH686_02030 0.29 +1.2 434,605 + OH686_02030 0.29 -0.8 434,605 + OH686_02030 0.29 -0.3 434,605 + OH686_02030 0.29 -0.0 434,605 + OH686_02030 0.29 +0.5 434,605 + OH686_02030 0.29 +0.5 434,605 + OH686_02030 0.29 -1.2 434,605 + OH686_02030 0.29 -1.3 434,605 + OH686_02030 0.29 -0.6 434,605 + OH686_02030 0.29 -0.8 434,605 + OH686_02030 0.29 -0.1 434,605 + OH686_02030 0.29 -1.1 434,605 + OH686_02030 0.29 +0.5 434,605 + OH686_02030 0.29 +0.2 434,605 + OH686_02030 0.29 +0.9 434,605 + OH686_02030 0.29 -0.3 434,605 + OH686_02030 0.29 -0.7 434,605 + OH686_02030 0.29 +1.2 434,605 + OH686_02030 0.29 -1.5 434,605 + OH686_02030 0.29 -0.8 434,606 - OH686_02030 0.29 +0.3 434,606 - OH686_02030 0.29 +0.0 434,606 - OH686_02030 0.29 -1.0 434,606 - OH686_02030 0.29 +0.6 434,606 - OH686_02030 0.29 -0.2 434,606 - OH686_02030 0.29 -0.0 434,606 - OH686_02030 0.29 -0.4 434,606 - OH686_02030 0.29 -0.3 434,827 + OH686_02030 0.55 -0.4 434,827 + OH686_02030 0.55 -0.4 434,827 + OH686_02030 0.55 -0.0 434,827 + OH686_02030 0.55 +0.9 434,827 + OH686_02030 0.55 +1.4 434,827 + OH686_02030 0.55 -0.3 434,827 + OH686_02030 0.55 +2.1 434,827 + OH686_02030 0.55 +0.3 434,827 + OH686_02030 0.55 -0.2 434,827 + OH686_02030 0.55 -0.7 434,827 + OH686_02030 0.55 -0.4 434,827 + OH686_02030 0.55 -0.6 434,828 - OH686_02030 0.55 +0.3 434,828 - OH686_02030 0.55 -0.0 434,828 - OH686_02030 0.55 +0.1 434,828 - OH686_02030 0.55 +0.4 434,828 - OH686_02030 0.55 +0.1 434,828 - OH686_02030 0.55 +0.1 434,828 - OH686_02030 0.55 +0.5 434,828 - OH686_02030 0.55 +0.1 434,828 - OH686_02030 0.55 -0.3 434,828 - OH686_02030 0.55 -1.7 434,828 - OH686_02030 0.55 -1.0 434,828 - OH686_02030 0.55 -0.1 434,828 - OH686_02030 0.55 +0.3 434,828 - OH686_02030 0.55 -0.3 434,828 - OH686_02030 0.55 -0.5
Or see this region's nucleotide sequence