Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_01720 and OH686_01725 are separated by 148 nucleotides OH686_01725 and OH686_01730 are separated by 54 nucleotides OH686_01730 and OH686_01735 are separated by 137 nucleotides OH686_01735 and OH686_01740 are separated by 58 nucleotides
OH686_01720: OH686_01720 - phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein, at 372,573 to 373,190
_01720
OH686_01725: OH686_01725 - Phosphoadenylyl-sulfate reductase [thioredoxin] , at 373,339 to 373,959
_01725
OH686_01730: OH686_01730 - Cys regulon transcriptional activator CysB, at 374,014 to 374,988
_01730
OH686_01735: OH686_01735 - Universal stress protein family, at 375,126 to 375,611
_01735
OH686_01740: OH686_01740 - 5'-nucleotidase , at 375,670 to 376,575
_01740
Position (kb) 374
375 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 373.158 kb on + strand at 373.158 kb on + strand at 373.158 kb on + strand at 373.158 kb on + strand at 373.158 kb on + strand at 373.158 kb on + strand at 373.159 kb on - strand at 373.159 kb on - strand at 373.159 kb on - strand at 373.159 kb on - strand at 373.201 kb on + strand at 373.202 kb on - strand at 373.202 kb on - strand at 373.234 kb on + strand at 373.234 kb on + strand at 373.234 kb on + strand at 373.234 kb on + strand at 373.234 kb on + strand at 373.234 kb on + strand at 373.234 kb on + strand at 373.234 kb on + strand at 373.234 kb on + strand at 373.235 kb on - strand at 373.235 kb on - strand at 373.235 kb on - strand at 373.235 kb on - strand at 373.235 kb on - strand at 373.965 kb on + strand at 373.965 kb on + strand at 373.965 kb on + strand at 373.966 kb on - strand at 373.966 kb on - strand at 373.966 kb on - strand at 374.093 kb on - strand at 374.093 kb on - strand at 374.093 kb on - strand at 374.093 kb on - strand at 374.242 kb on - strand, within OH686_01730 at 374.291 kb on + strand, within OH686_01730 at 374.291 kb on + strand, within OH686_01730 at 374.291 kb on + strand, within OH686_01730 at 374.291 kb on + strand, within OH686_01730 at 374.291 kb on + strand, within OH686_01730 at 374.291 kb on + strand, within OH686_01730 at 374.292 kb on - strand, within OH686_01730 at 374.292 kb on - strand, within OH686_01730 at 374.292 kb on - strand, within OH686_01730 at 374.292 kb on - strand, within OH686_01730 at 374.292 kb on - strand, within OH686_01730 at 374.292 kb on - strand, within OH686_01730 at 374.292 kb on - strand, within OH686_01730 at 374.292 kb on - strand, within OH686_01730 at 374.399 kb on + strand, within OH686_01730 at 374.399 kb on + strand, within OH686_01730 at 374.399 kb on + strand, within OH686_01730 at 374.399 kb on + strand, within OH686_01730 at 374.399 kb on + strand, within OH686_01730 at 374.399 kb on + strand, within OH686_01730 at 374.399 kb on + strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.400 kb on - strand, within OH686_01730 at 374.672 kb on + strand, within OH686_01730 at 374.672 kb on + strand, within OH686_01730 at 374.672 kb on + strand, within OH686_01730 at 374.672 kb on + strand, within OH686_01730 at 374.672 kb on + strand, within OH686_01730 at 374.673 kb on - strand, within OH686_01730 at 374.673 kb on - strand, within OH686_01730 at 374.907 kb on + strand at 374.907 kb on + strand at 374.907 kb on + strand at 374.907 kb on + strand at 374.907 kb on + strand at 374.907 kb on + strand at 374.908 kb on - strand at 374.908 kb on - strand at 374.908 kb on - strand at 374.908 kb on - strand at 374.909 kb on + strand at 374.909 kb on + strand at 374.909 kb on + strand at 374.909 kb on + strand at 374.909 kb on + strand at 374.909 kb on + strand at 374.909 kb on + strand at 374.909 kb on + strand at 374.909 kb on + strand at 374.910 kb on - strand at 374.910 kb on - strand at 374.910 kb on - strand at 374.910 kb on - strand at 374.910 kb on - strand at 374.910 kb on - strand at 374.910 kb on - strand at 374.910 kb on - strand at 374.966 kb on + strand at 374.966 kb on + strand at 374.966 kb on + strand at 374.966 kb on + strand at 374.966 kb on + strand at 374.966 kb on + strand at 374.966 kb on + strand at 374.966 kb on + strand at 374.967 kb on - strand at 374.967 kb on - strand at 374.967 kb on - strand at 374.967 kb on - strand at 374.967 kb on - strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.988 kb on + strand at 374.989 kb on - strand at 374.989 kb on - strand at 374.989 kb on - strand at 374.989 kb on - strand at 374.989 kb on - strand at 374.989 kb on - strand at 374.989 kb on - strand at 374.989 kb on - strand at 374.989 kb on - strand at 374.991 kb on - strand at 374.992 kb on + strand at 374.992 kb on + strand at 374.992 kb on + strand at 374.992 kb on + strand at 374.993 kb on - strand at 374.993 kb on - strand at 375.008 kb on + strand at 375.009 kb on - strand at 375.009 kb on - strand at 375.041 kb on + strand at 375.041 kb on + strand at 375.042 kb on - strand at 375.047 kb on + strand at 375.047 kb on + strand at 375.048 kb on - strand at 375.064 kb on + strand at 375.087 kb on + strand at 375.087 kb on + strand at 375.088 kb on - strand at 375.088 kb on - strand at 375.088 kb on - strand at 375.154 kb on + strand at 375.154 kb on + strand at 375.155 kb on - strand at 375.155 kb on - strand at 375.155 kb on - strand at 375.155 kb on - strand at 375.197 kb on + strand, within OH686_01735 at 375.241 kb on - strand, within OH686_01735 at 375.241 kb on - strand, within OH686_01735 at 375.315 kb on + strand, within OH686_01735 at 375.316 kb on - strand, within OH686_01735 at 375.327 kb on + strand, within OH686_01735 at 375.327 kb on + strand, within OH686_01735 at 375.327 kb on + strand, within OH686_01735 at 375.327 kb on + strand, within OH686_01735 at 375.328 kb on - strand, within OH686_01735 at 375.328 kb on - strand, within OH686_01735 at 375.328 kb on - strand, within OH686_01735 at 375.328 kb on - strand, within OH686_01735 at 375.328 kb on - strand, within OH686_01735 at 375.328 kb on - strand, within OH686_01735 at 375.454 kb on + strand, within OH686_01735 at 375.454 kb on + strand, within OH686_01735 at 375.454 kb on + strand, within OH686_01735 at 375.454 kb on + strand, within OH686_01735 at 375.454 kb on + strand, within OH686_01735 at 375.454 kb on + strand, within OH686_01735 at 375.454 kb on + strand, within OH686_01735 at 375.454 kb on + strand, within OH686_01735 at 375.455 kb on - strand, within OH686_01735 at 375.455 kb on - strand, within OH686_01735 at 375.455 kb on - strand, within OH686_01735 at 375.455 kb on - strand, within OH686_01735 at 375.455 kb on - strand, within OH686_01735 at 375.455 kb on - strand, within OH686_01735 at 375.455 kb on - strand, within OH686_01735 at 375.455 kb on - strand, within OH686_01735 at 375.455 kb on - strand, within OH686_01735 at 375.562 kb on + strand, within OH686_01735 at 375.562 kb on + strand, within OH686_01735 at 375.562 kb on + strand, within OH686_01735 at 375.562 kb on + strand, within OH686_01735 at 375.562 kb on + strand, within OH686_01735 at 375.563 kb on - strand at 375.563 kb on - strand at 375.563 kb on - strand at 375.563 kb on - strand at 375.563 kb on - strand at 375.563 kb on - strand at 375.563 kb on - strand at 375.563 kb on - strand at 375.571 kb on + strand at 375.571 kb on + strand at 375.572 kb on - strand at 375.572 kb on - strand at 375.592 kb on + strand at 375.592 kb on + strand at 375.593 kb on - strand at 375.634 kb on - strand at 375.634 kb on - strand at 375.650 kb on + strand at 375.650 kb on + strand at 375.650 kb on + strand at 375.650 kb on + strand at 375.650 kb on + strand at 375.651 kb on - strand at 375.820 kb on + strand, within OH686_01740
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 373,158 + -0.0 373,158 + +0.0 373,158 + -0.2 373,158 + -0.2 373,158 + +0.6 373,158 + +0.7 373,159 - +1.3 373,159 - +0.1 373,159 - +0.7 373,159 - +0.9 373,201 + -0.3 373,202 - -0.0 373,202 - -0.7 373,234 + +0.9 373,234 + +0.2 373,234 + +0.3 373,234 + -0.9 373,234 + +0.5 373,234 + -0.2 373,234 + +0.3 373,234 + +0.6 373,234 + +0.8 373,235 - +1.1 373,235 - +0.4 373,235 - +0.4 373,235 - -0.4 373,235 - -0.2 373,965 + -0.3 373,965 + -0.4 373,965 + -0.2 373,966 - -0.1 373,966 - -0.1 373,966 - -1.4 374,093 - -0.9 374,093 - -1.6 374,093 - +0.1 374,093 - -0.5 374,242 - OH686_01730 0.23 -2.0 374,291 + OH686_01730 0.28 -0.8 374,291 + OH686_01730 0.28 -2.1 374,291 + OH686_01730 0.28 +0.5 374,291 + OH686_01730 0.28 -2.1 374,291 + OH686_01730 0.28 +0.5 374,291 + OH686_01730 0.28 -2.7 374,292 - OH686_01730 0.29 -0.2 374,292 - OH686_01730 0.29 -0.8 374,292 - OH686_01730 0.29 +0.0 374,292 - OH686_01730 0.29 -1.4 374,292 - OH686_01730 0.29 -0.9 374,292 - OH686_01730 0.29 -2.8 374,292 - OH686_01730 0.29 -1.9 374,292 - OH686_01730 0.29 -0.4 374,399 + OH686_01730 0.39 -1.3 374,399 + OH686_01730 0.39 -1.0 374,399 + OH686_01730 0.39 -2.1 374,399 + OH686_01730 0.39 -1.3 374,399 + OH686_01730 0.39 -1.1 374,399 + OH686_01730 0.39 +1.0 374,399 + OH686_01730 0.39 -1.1 374,400 - OH686_01730 0.40 -0.1 374,400 - OH686_01730 0.40 -0.5 374,400 - OH686_01730 0.40 -1.9 374,400 - OH686_01730 0.40 -1.2 374,400 - OH686_01730 0.40 +0.3 374,400 - OH686_01730 0.40 -2.0 374,400 - OH686_01730 0.40 -0.4 374,400 - OH686_01730 0.40 -1.4 374,400 - OH686_01730 0.40 -2.8 374,400 - OH686_01730 0.40 -0.6 374,400 - OH686_01730 0.40 -1.2 374,400 - OH686_01730 0.40 -0.6 374,400 - OH686_01730 0.40 -0.8 374,672 + OH686_01730 0.67 -0.9 374,672 + OH686_01730 0.67 +0.0 374,672 + OH686_01730 0.67 -1.0 374,672 + OH686_01730 0.67 -1.7 374,672 + OH686_01730 0.67 -2.0 374,673 - OH686_01730 0.68 +0.7 374,673 - OH686_01730 0.68 -0.9 374,907 + -2.4 374,907 + -1.2 374,907 + -0.3 374,907 + +0.5 374,907 + -2.7 374,907 + -0.3 374,908 - -2.2 374,908 - -0.8 374,908 - +0.5 374,908 - -1.5 374,909 + -0.3 374,909 + -0.6 374,909 + -0.6 374,909 + -1.7 374,909 + -2.3 374,909 + -1.0 374,909 + -1.9 374,909 + -1.7 374,909 + -0.8 374,910 - -0.1 374,910 - -1.3 374,910 - -1.2 374,910 - -0.9 374,910 - +0.0 374,910 - -1.8 374,910 - -1.2 374,910 - -1.3 374,966 + -1.0 374,966 + +0.1 374,966 + -1.1 374,966 + -0.5 374,966 + -1.1 374,966 + -2.0 374,966 + +0.5 374,966 + -0.8 374,967 - -2.2 374,967 - -2.7 374,967 - +1.0 374,967 - -1.8 374,967 - -0.7 374,988 + +1.0 374,988 + -1.5 374,988 + +0.4 374,988 + +0.0 374,988 + -0.8 374,988 + +1.0 374,988 + -0.9 374,988 + -1.5 374,988 + +0.5 374,988 + +0.7 374,988 + +0.8 374,988 + -0.3 374,988 + +0.5 374,988 + +0.1 374,989 - -0.9 374,989 - -0.3 374,989 - +0.4 374,989 - -0.3 374,989 - -0.4 374,989 - +0.5 374,989 - -2.2 374,989 - -0.3 374,989 - +0.3 374,991 - -0.5 374,992 + -0.2 374,992 + -0.5 374,992 + -1.7 374,992 + -0.7 374,993 - +0.5 374,993 - -1.0 375,008 + -1.0 375,009 - -0.2 375,009 - -0.6 375,041 + -0.5 375,041 + +0.9 375,042 - -0.3 375,047 + -0.3 375,047 + +0.1 375,048 - +0.3 375,064 + -0.3 375,087 + -1.5 375,087 + -1.1 375,088 - -0.4 375,088 - -0.1 375,088 - -0.3 375,154 + -0.3 375,154 + +1.6 375,155 - +0.2 375,155 - -0.3 375,155 - -0.5 375,155 - +0.9 375,197 + OH686_01735 0.15 +0.2 375,241 - OH686_01735 0.24 -0.2 375,241 - OH686_01735 0.24 -1.8 375,315 + OH686_01735 0.39 -0.1 375,316 - OH686_01735 0.39 -0.1 375,327 + OH686_01735 0.41 +0.3 375,327 + OH686_01735 0.41 -0.6 375,327 + OH686_01735 0.41 -0.1 375,327 + OH686_01735 0.41 -0.9 375,328 - OH686_01735 0.42 +0.6 375,328 - OH686_01735 0.42 +0.5 375,328 - OH686_01735 0.42 -0.5 375,328 - OH686_01735 0.42 -0.3 375,328 - OH686_01735 0.42 -0.4 375,328 - OH686_01735 0.42 -0.5 375,454 + OH686_01735 0.67 -0.9 375,454 + OH686_01735 0.67 -1.1 375,454 + OH686_01735 0.67 +0.5 375,454 + OH686_01735 0.67 +1.3 375,454 + OH686_01735 0.67 -0.2 375,454 + OH686_01735 0.67 -0.8 375,454 + OH686_01735 0.67 -0.5 375,454 + OH686_01735 0.67 +0.0 375,455 - OH686_01735 0.68 +0.0 375,455 - OH686_01735 0.68 -0.9 375,455 - OH686_01735 0.68 +0.1 375,455 - OH686_01735 0.68 -0.6 375,455 - OH686_01735 0.68 +0.6 375,455 - OH686_01735 0.68 -0.5 375,455 - OH686_01735 0.68 +1.1 375,455 - OH686_01735 0.68 -0.4 375,455 - OH686_01735 0.68 +0.2 375,562 + OH686_01735 0.90 +0.0 375,562 + OH686_01735 0.90 -1.6 375,562 + OH686_01735 0.90 -0.0 375,562 + OH686_01735 0.90 -0.5 375,562 + OH686_01735 0.90 +0.5 375,563 - -0.6 375,563 - -0.2 375,563 - +0.1 375,563 - +0.3 375,563 - -0.1 375,563 - +0.5 375,563 - -1.9 375,563 - -0.2 375,571 + -0.7 375,571 + -1.2 375,572 - -0.6 375,572 - +1.0 375,592 + +1.0 375,592 + +0.5 375,593 - +0.8 375,634 - +0.3 375,634 - -1.2 375,650 + -0.0 375,650 + -2.4 375,650 + +1.4 375,650 + +0.5 375,650 + +0.5 375,651 - -0.9 375,820 + OH686_01740 0.17 -1.8
Or see this region's nucleotide sequence