Experiment: m.b. Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1892 and Echvi_1893 overlap by 17 nucleotides Echvi_1893 and Echvi_1894 overlap by 4 nucleotides Echvi_1894 and Echvi_1895 are separated by 10 nucleotides Echvi_1895 and Echvi_1896 are separated by 6 nucleotides Echvi_1896 and Echvi_1897 are separated by 258 nucleotides
Echvi_1892: Echvi_1892 - Molybdopterin-guanine dinucleotide biosynthesis protein A, at 2,221,307 to 2,221,903
_1892
Echvi_1893: Echvi_1893 - molybdenum cofactor biosynthesis protein MoaC, at 2,221,887 to 2,222,363
_1893
Echvi_1894: Echvi_1894 - molybdenum cofactor biosynthesis protein A, bacterial, at 2,222,360 to 2,223,337
_1894
Echvi_1895: Echvi_1895 - Molybdopterin converting factor, large subunit, at 2,223,348 to 2,223,764
_1895
Echvi_1896: Echvi_1896 - Molybdopterin converting factor, small subunit, at 2,223,771 to 2,224,061
_1896
Echvi_1897: Echvi_1897 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 2,224,320 to 2,225,000
_1897
Position (kb)
2222
2223
2224 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2221.389 kb on + strand, within Echvi_1892 at 2221.400 kb on + strand, within Echvi_1892 at 2221.400 kb on + strand, within Echvi_1892 at 2221.400 kb on + strand, within Echvi_1892 at 2221.400 kb on + strand, within Echvi_1892 at 2221.401 kb on - strand, within Echvi_1892 at 2221.401 kb on - strand, within Echvi_1892 at 2221.401 kb on - strand, within Echvi_1892 at 2221.401 kb on - strand, within Echvi_1892 at 2221.568 kb on + strand, within Echvi_1892 at 2221.610 kb on + strand, within Echvi_1892 at 2221.610 kb on + strand, within Echvi_1892 at 2221.610 kb on + strand, within Echvi_1892 at 2221.682 kb on - strand, within Echvi_1892 at 2221.700 kb on + strand, within Echvi_1892 at 2221.701 kb on - strand, within Echvi_1892 at 2221.704 kb on + strand, within Echvi_1892 at 2221.704 kb on + strand, within Echvi_1892 at 2221.704 kb on + strand, within Echvi_1892 at 2221.704 kb on + strand, within Echvi_1892 at 2221.704 kb on + strand, within Echvi_1892 at 2221.705 kb on - strand, within Echvi_1892 at 2221.788 kb on + strand, within Echvi_1892 at 2221.794 kb on + strand, within Echvi_1892 at 2221.794 kb on + strand, within Echvi_1892 at 2221.815 kb on + strand, within Echvi_1892 at 2221.834 kb on + strand, within Echvi_1892 at 2221.835 kb on - strand, within Echvi_1892 at 2221.872 kb on - strand at 2221.926 kb on + strand at 2221.927 kb on - strand at 2221.974 kb on - strand, within Echvi_1893 at 2221.978 kb on + strand, within Echvi_1893 at 2221.978 kb on + strand, within Echvi_1893 at 2221.978 kb on + strand, within Echvi_1893 at 2221.979 kb on - strand, within Echvi_1893 at 2221.979 kb on - strand, within Echvi_1893 at 2222.054 kb on + strand, within Echvi_1893 at 2222.101 kb on - strand, within Echvi_1893 at 2222.238 kb on + strand, within Echvi_1893 at 2222.255 kb on + strand, within Echvi_1893 at 2222.373 kb on - strand at 2222.523 kb on + strand, within Echvi_1894 at 2222.524 kb on - strand, within Echvi_1894 at 2222.646 kb on - strand, within Echvi_1894 at 2222.704 kb on + strand, within Echvi_1894 at 2222.704 kb on + strand, within Echvi_1894 at 2222.705 kb on - strand, within Echvi_1894 at 2222.725 kb on - strand, within Echvi_1894 at 2222.814 kb on + strand, within Echvi_1894 at 2222.877 kb on - strand, within Echvi_1894 at 2222.928 kb on + strand, within Echvi_1894 at 2222.954 kb on - strand, within Echvi_1894 at 2223.025 kb on + strand, within Echvi_1894 at 2223.111 kb on - strand, within Echvi_1894 at 2223.223 kb on + strand, within Echvi_1894 at 2223.269 kb on + strand at 2223.274 kb on + strand at 2223.385 kb on + strand at 2223.386 kb on - strand at 2223.429 kb on + strand, within Echvi_1895 at 2223.437 kb on - strand, within Echvi_1895 at 2223.437 kb on - strand, within Echvi_1895 at 2223.537 kb on + strand, within Echvi_1895 at 2223.543 kb on - strand, within Echvi_1895 at 2223.547 kb on - strand, within Echvi_1895 at 2223.591 kb on + strand, within Echvi_1895 at 2223.592 kb on - strand, within Echvi_1895 at 2223.651 kb on + strand, within Echvi_1895 at 2223.652 kb on - strand, within Echvi_1895 at 2223.715 kb on + strand, within Echvi_1895 at 2223.753 kb on - strand at 2223.767 kb on - strand at 2223.792 kb on + strand at 2223.793 kb on - strand at 2223.841 kb on + strand, within Echvi_1896 at 2223.841 kb on + strand, within Echvi_1896 at 2223.846 kb on + strand, within Echvi_1896 at 2223.847 kb on - strand, within Echvi_1896 at 2223.847 kb on - strand, within Echvi_1896 at 2223.924 kb on + strand, within Echvi_1896 at 2224.017 kb on - strand, within Echvi_1896 at 2224.076 kb on - strand at 2224.090 kb on - strand at 2224.149 kb on + strand at 2224.174 kb on + strand at 2224.187 kb on + strand at 2224.193 kb on + strand at 2224.239 kb on + strand at 2224.240 kb on - strand at 2224.315 kb on + strand at 2224.315 kb on + strand at 2224.316 kb on - strand at 2224.322 kb on - strand at 2224.323 kb on + strand at 2224.323 kb on + strand at 2224.335 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.2 mM remove 2,221,389 + Echvi_1892 0.14 -0.3 2,221,400 + Echvi_1892 0.16 +0.2 2,221,400 + Echvi_1892 0.16 +0.6 2,221,400 + Echvi_1892 0.16 -1.8 2,221,400 + Echvi_1892 0.16 +0.1 2,221,401 - Echvi_1892 0.16 +0.3 2,221,401 - Echvi_1892 0.16 +0.6 2,221,401 - Echvi_1892 0.16 +0.0 2,221,401 - Echvi_1892 0.16 +1.3 2,221,568 + Echvi_1892 0.44 +1.1 2,221,610 + Echvi_1892 0.51 -0.8 2,221,610 + Echvi_1892 0.51 -0.9 2,221,610 + Echvi_1892 0.51 +0.8 2,221,682 - Echvi_1892 0.63 +0.5 2,221,700 + Echvi_1892 0.66 -0.2 2,221,701 - Echvi_1892 0.66 -0.7 2,221,704 + Echvi_1892 0.66 +1.2 2,221,704 + Echvi_1892 0.66 +0.2 2,221,704 + Echvi_1892 0.66 -0.1 2,221,704 + Echvi_1892 0.66 +0.3 2,221,704 + Echvi_1892 0.66 -0.3 2,221,705 - Echvi_1892 0.67 +2.0 2,221,788 + Echvi_1892 0.81 +1.1 2,221,794 + Echvi_1892 0.82 +1.1 2,221,794 + Echvi_1892 0.82 +0.8 2,221,815 + Echvi_1892 0.85 -1.5 2,221,834 + Echvi_1892 0.88 -0.7 2,221,835 - Echvi_1892 0.88 +0.1 2,221,872 - +1.1 2,221,926 + -0.9 2,221,927 - -0.1 2,221,974 - Echvi_1893 0.18 +1.5 2,221,978 + Echvi_1893 0.19 -1.5 2,221,978 + Echvi_1893 0.19 +1.4 2,221,978 + Echvi_1893 0.19 +0.1 2,221,979 - Echvi_1893 0.19 -1.3 2,221,979 - Echvi_1893 0.19 +1.0 2,222,054 + Echvi_1893 0.35 +1.0 2,222,101 - Echvi_1893 0.45 +1.8 2,222,238 + Echvi_1893 0.74 -0.4 2,222,255 + Echvi_1893 0.77 +1.8 2,222,373 - -0.1 2,222,523 + Echvi_1894 0.17 -1.1 2,222,524 - Echvi_1894 0.17 -0.5 2,222,646 - Echvi_1894 0.29 -1.5 2,222,704 + Echvi_1894 0.35 +0.1 2,222,704 + Echvi_1894 0.35 -0.1 2,222,705 - Echvi_1894 0.35 +0.1 2,222,725 - Echvi_1894 0.37 -0.5 2,222,814 + Echvi_1894 0.46 -0.9 2,222,877 - Echvi_1894 0.53 +1.0 2,222,928 + Echvi_1894 0.58 -0.2 2,222,954 - Echvi_1894 0.61 -1.1 2,223,025 + Echvi_1894 0.68 +0.3 2,223,111 - Echvi_1894 0.77 -0.0 2,223,223 + Echvi_1894 0.88 -0.8 2,223,269 + -0.6 2,223,274 + +0.4 2,223,385 + +1.4 2,223,386 - -0.4 2,223,429 + Echvi_1895 0.19 +0.9 2,223,437 - Echvi_1895 0.21 +0.6 2,223,437 - Echvi_1895 0.21 -0.0 2,223,537 + Echvi_1895 0.45 -0.0 2,223,543 - Echvi_1895 0.47 +0.1 2,223,547 - Echvi_1895 0.48 -0.5 2,223,591 + Echvi_1895 0.58 +0.9 2,223,592 - Echvi_1895 0.59 +1.0 2,223,651 + Echvi_1895 0.73 +0.9 2,223,652 - Echvi_1895 0.73 -1.7 2,223,715 + Echvi_1895 0.88 +0.4 2,223,753 - -1.7 2,223,767 - -0.8 2,223,792 + +0.5 2,223,793 - -0.2 2,223,841 + Echvi_1896 0.24 -0.3 2,223,841 + Echvi_1896 0.24 +0.5 2,223,846 + Echvi_1896 0.26 -1.1 2,223,847 - Echvi_1896 0.26 +0.3 2,223,847 - Echvi_1896 0.26 -1.5 2,223,924 + Echvi_1896 0.53 -1.8 2,224,017 - Echvi_1896 0.85 -1.2 2,224,076 - +0.3 2,224,090 - +0.5 2,224,149 + +0.4 2,224,174 + +0.3 2,224,187 + -0.4 2,224,193 + +0.2 2,224,239 + +0.3 2,224,240 - -0.4 2,224,315 + -0.3 2,224,315 + +0.3 2,224,316 - +0.4 2,224,322 - -0.4 2,224,323 + +0.8 2,224,323 + -1.4 2,224,335 - -0.1
Or see this region's nucleotide sequence