Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03992

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,620,653	-		CCNA_03457	0.21	+0.0
3,620,655	+		CCNA_03457	0.21	-0.2
3,620,663	-		CCNA_03457	0.22	+0.0
3,620,663	-		CCNA_03457	0.22	-1.6
3,620,668	-		CCNA_03457	0.23	+0.0
3,620,672	+		CCNA_03457	0.24	-0.7
3,620,672	+		CCNA_03457	0.24	-2.0
3,620,680	-		CCNA_03457	0.25	+0.5
3,620,680	-		CCNA_03457	0.25	+0.0
3,620,689	+		CCNA_03457	0.26	-0.1
3,620,689	+		CCNA_03457	0.26	+0.3
3,620,721	+		CCNA_03457	0.30	-1.6
3,620,729	-		CCNA_03457	0.31	-2.4
3,620,741	+		CCNA_03457	0.32	-0.3
3,620,749	-		CCNA_03457	0.33	+0.2
3,620,791	+		CCNA_03457	0.39	-0.8
3,620,798	+		CCNA_03457	0.40	-0.9
3,620,798	+		CCNA_03457	0.40	+0.5
3,620,798	+		CCNA_03457	0.40	-0.2
3,620,799	+		CCNA_03457	0.40	+0.1
3,620,806	-		CCNA_03457	0.41	-1.8
3,620,819	+		CCNA_03457	0.42	-0.6
3,620,838	-		CCNA_03457	0.45	-0.6
3,620,879	-		CCNA_03457	0.50	+0.9
3,620,923	-		CCNA_03457	0.56	-0.1
3,620,993	+		CCNA_03457	0.65	-0.2
3,621,104	-		CCNA_03457	0.79	-0.4
3,621,104	-		CCNA_03457	0.79	-0.7
3,621,104	-		CCNA_03457	0.79	+0.1
3,621,106	+		CCNA_03457	0.79	-0.3
3,621,151	+		CCNA_03457	0.85	+0.3
3,621,151	+		CCNA_03457	0.85	-1.0
3,621,156	+		CCNA_03457	0.86	-0.2
3,621,156	+		CCNA_03457	0.86	-1.8
3,621,156	+		CCNA_03457	0.86	+0.5
3,621,164	-		CCNA_03457	0.87	-0.2
3,621,164	-		CCNA_03457	0.87	-0.3
3,621,164	-		CCNA_03457	0.87	-1.0
3,621,164	-		CCNA_03457	0.87	+0.6
3,621,164	-		CCNA_03457	0.87	-0.0
3,621,164	-		CCNA_03457	0.87	-0.9
3,621,164	-		CCNA_03457	0.87	+0.1
3,621,164	-		CCNA_03457	0.87	-0.2
3,621,164	-		CCNA_03457	0.87	-0.8
3,621,202	+				+0.4
3,621,210	-				-1.2
3,621,230	-				-1.0
3,621,291	-		CCNA_03458	0.26	+0.3
3,621,298	+		CCNA_03458	0.27	-0.7
3,621,319	+		CCNA_03458	0.32	-0.7
3,621,342	+		CCNA_03458	0.36	-0.6
3,621,344	+		CCNA_03458	0.37	-0.1
3,621,357	+		CCNA_03458	0.40	-0.4
3,621,376	+		CCNA_03458	0.43	-0.9
3,621,500	-		CCNA_03458	0.69	+0.1
3,621,576	+		CCNA_03458	0.85	-0.1
3,621,601	+		CCNA_03458	0.90	-1.2
3,621,673	+		CCNA_03992	0.41	-0.5
3,621,681	+		CCNA_03992	0.51	+0.2
3,621,691	+		CCNA_03992	0.64	-1.5
3,621,782	+				+0.2
3,621,810	-				+0.3
3,621,825	+				-2.4
3,621,833	-				-1.2
3,621,891	-				-0.2
3,621,926	-				-2.0
3,621,933	-				-0.2
3,622,003	-				+0.2
3,622,028	+		CCNA_03459	0.11	+0.4
3,622,045	+		CCNA_03459	0.12	-2.0
3,622,045	+		CCNA_03459	0.12	+1.8
3,622,050	+		CCNA_03459	0.12	-1.3
3,622,052	+		CCNA_03459	0.13	-0.4
3,622,053	-		CCNA_03459	0.13	-0.1
3,622,053	-		CCNA_03459	0.13	-0.4
3,622,120	-		CCNA_03459	0.16	-0.2
3,622,144	+		CCNA_03459	0.18	-1.0
3,622,213	+		CCNA_03459	0.22	+0.1
3,622,223	+		CCNA_03459	0.22	-1.8
3,622,231	-		CCNA_03459	0.23	-1.0
3,622,234	+		CCNA_03459	0.23	-0.3
3,622,234	+		CCNA_03459	0.23	-0.6
3,622,234	+		CCNA_03459	0.23	-0.4
3,622,242	-		CCNA_03459	0.23	-0.6
3,622,242	-		CCNA_03459	0.23	-1.7
3,622,310	-		CCNA_03459	0.27	-0.5
3,622,310	-		CCNA_03459	0.27	+0.2
3,622,412	+		CCNA_03459	0.33	+0.3
3,622,418	+		CCNA_03459	0.33	-0.1
3,622,418	+		CCNA_03459	0.33	+0.3
3,622,418	+		CCNA_03459	0.33	+0.5
3,622,428	+		CCNA_03459	0.34	-0.1
3,622,496	-		CCNA_03459	0.38	-0.5
3,622,520	-		CCNA_03459	0.39	+0.2
3,622,530	+		CCNA_03459	0.40	+0.1
3,622,572	+		CCNA_03459	0.42	-1.2
3,622,581	-		CCNA_03459	0.42	-0.1
3,622,598	-		CCNA_03459	0.43	+0.6
3,622,602	+		CCNA_03459	0.44	-0.2
3,622,714	+		CCNA_03459	0.50	-1.5