Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03988

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,396,241	+		CCNA_03230	0.37	-0.4
3,396,241	+		CCNA_03230	0.37	-0.1
3,396,241	+		CCNA_03230	0.37	-0.0
3,396,249	-		CCNA_03230	0.37	-0.3
3,396,256	-		CCNA_03230	0.38	-0.7
3,396,271	-		CCNA_03230	0.39	+0.4
3,396,310	-		CCNA_03230	0.42	-0.1
3,396,344	+		CCNA_03230	0.44	-0.8
3,396,366	-		CCNA_03230	0.46	-1.3
3,396,385	-		CCNA_03230	0.47	-1.0
3,396,440	+		CCNA_03230	0.51	-0.3
3,396,443	-		CCNA_03230	0.51	+0.1
3,396,511	-		CCNA_03230	0.56	-1.3
3,396,526	-		CCNA_03230	0.57	-0.3
3,396,562	+		CCNA_03230	0.60	-1.3
3,396,575	+		CCNA_03230	0.61	-0.7
3,396,575	+		CCNA_03230	0.61	-0.1
3,396,583	-		CCNA_03230	0.61	+1.5
3,396,583	-		CCNA_03230	0.61	-2.1
3,396,583	-		CCNA_03230	0.61	+1.5
3,396,585	+		CCNA_03230	0.62	+0.5
3,396,593	-		CCNA_03230	0.62	-1.1
3,396,619	+		CCNA_03230	0.64	-2.6
3,396,627	-		CCNA_03230	0.65	-1.1
3,396,687	+		CCNA_03230	0.69	-1.5
3,396,719	+		CCNA_03230	0.71	-1.0
3,396,720	-		CCNA_03230	0.71	+0.5
3,396,733	+		CCNA_03230	0.72	-0.8
3,396,733	+		CCNA_03230	0.72	+0.2
3,396,734	+		CCNA_03230	0.72	-1.3
3,396,802	+		CCNA_03230	0.77	-1.4
3,396,803	-		CCNA_03230	0.77	+1.3
3,396,810	-		CCNA_03230	0.78	-0.6
3,396,810	-		CCNA_03230	0.78	-1.0
3,396,810	-		CCNA_03230	0.78	-0.9
3,396,834	-		CCNA_03230	0.79	-0.3
3,396,861	-		CCNA_03230	0.81	-0.9
3,396,883	-		CCNA_03230	0.83	-1.2
3,396,910	+		CCNA_03230	0.85	-0.8
3,396,934	+		CCNA_03230	0.86	+0.9
3,396,991	+				-0.6
3,397,027	+				-2.5
3,397,035	-				-0.2
3,397,040	+				+1.1
3,397,040	+				+0.7
3,397,040	+				-0.1
3,397,048	-				-0.4
3,397,053	-				-0.9
3,397,054	-				-0.8
3,397,062	-				-0.1
3,397,094	+				-2.4
3,397,094	+				-1.1
3,397,131	+				-2.3
3,397,194	+		CCNA_03988	0.14	-1.0
3,397,202	-				+0.5
3,397,284	+				+0.9
3,397,320	+				-0.0
3,397,340	-				-0.9
3,397,341	+				+0.3
3,397,349	-				-0.1
3,397,376	+				-0.6
3,397,376	+				+0.0
3,397,389	-				-0.7
3,397,404	+		CCNA_03232	0.14	+0.9
3,397,426	+		CCNA_03232	0.22	+0.3
3,397,434	-		CCNA_03232	0.25	-0.2
3,397,444	-		CCNA_03232	0.29	+0.5
3,397,444	-		CCNA_03232	0.29	-0.7
3,397,479	-		CCNA_03232	0.41	+0.3
3,397,486	+		CCNA_03232	0.44	+0.9
3,397,494	-		CCNA_03232	0.47	-0.1
3,397,504	+		CCNA_03232	0.50	+0.9
3,397,528	+		CCNA_03232	0.59	-1.1
3,397,528	+		CCNA_03232	0.59	-1.7
3,397,528	+		CCNA_03232	0.59	-0.3
3,397,536	-		CCNA_03232	0.62	-0.1
3,397,536	-		CCNA_03232	0.62	-0.1
3,397,536	-		CCNA_03232	0.62	+0.4
3,397,536	-		CCNA_03232	0.62	+1.9
3,397,536	-		CCNA_03232	0.62	+0.3
3,397,536	-		CCNA_03232	0.62	-0.8
3,397,536	-		CCNA_03232	0.62	+1.5
3,397,572	-		CCNA_03232	0.75	-0.0
3,397,574	-		CCNA_03232	0.76	+0.3
3,397,574	-		CCNA_03232	0.76	-1.6
3,397,584	+		CCNA_03232	0.79	+0.3
3,397,617	-				-1.1
3,397,634	+				-0.1
3,397,653	+				-1.4
3,397,686	+				+0.4
3,397,686	+				-2.5
3,397,710	+				-0.1
3,397,780	-				+0.3
3,397,780	-				-0.9
3,397,789	+		CCNA_03233	0.10	-0.2
3,397,789	+		CCNA_03233	0.10	-0.1
3,397,789	+		CCNA_03233	0.10	-1.1
3,397,797	-		CCNA_03233	0.11	-0.9
3,397,811	+		CCNA_03233	0.12	-1.3
3,397,822	+		CCNA_03233	0.13	-0.9
3,397,906	-		CCNA_03233	0.19	+0.4
3,397,938	-		CCNA_03233	0.21	-0.4
3,397,949	+		CCNA_03233	0.22	-1.9
3,397,949	+		CCNA_03233	0.22	-0.5
3,397,966	+		CCNA_03233	0.23	-0.6
3,397,979	+		CCNA_03233	0.24	+0.3
3,398,002	+		CCNA_03233	0.26	+0.4
3,398,051	+		CCNA_03233	0.29	-0.1
3,398,059	-		CCNA_03233	0.30	+0.4
3,398,059	-		CCNA_03233	0.30	-1.7
3,398,087	+		CCNA_03233	0.32	-0.3
3,398,107	+		CCNA_03233	0.33	+0.9
3,398,115	-		CCNA_03233	0.34	-0.6
3,398,115	-		CCNA_03233	0.34	-0.2
3,398,157	+		CCNA_03233	0.37	-1.7
3,398,165	-		CCNA_03233	0.37	-0.4
3,398,165	-		CCNA_03233	0.37	+0.3
3,398,169	+		CCNA_03233	0.37	-0.7
3,398,188	+		CCNA_03233	0.39	-0.2
3,398,188	+		CCNA_03233	0.39	-0.3
3,398,188	+		CCNA_03233	0.39	-0.8
3,398,196	-		CCNA_03233	0.39	-0.9
3,398,196	-		CCNA_03233	0.39	+1.4
3,398,196	-		CCNA_03233	0.39	-1.1
3,398,201	-		CCNA_03233	0.40	-1.0
3,398,210	-		CCNA_03233	0.40	-1.2
3,398,230	-		CCNA_03233	0.42	+0.0
3,398,230	-		CCNA_03233	0.42	-0.6
3,398,230	-		CCNA_03233	0.42	+1.9
3,398,264	+		CCNA_03233	0.44	-0.1
3,398,272	-		CCNA_03233	0.45	-0.3
3,398,371	-		CCNA_03233	0.52	+1.5
3,398,378	+		CCNA_03233	0.52	-1.7
3,398,472	+		CCNA_03233	0.59	-0.5
3,398,472	+		CCNA_03233	0.59	-0.3
3,398,472	+		CCNA_03233	0.59	+0.4
3,398,477	+		CCNA_03233	0.59	-0.7
3,398,521	+		CCNA_03233	0.63	+0.8
3,398,521	+		CCNA_03233	0.63	-0.8
3,398,526	+		CCNA_03233	0.63	-0.8
3,398,529	-		CCNA_03233	0.63	-0.8
3,398,547	+		CCNA_03233	0.64	+0.2
3,398,594	+		CCNA_03233	0.68	+0.2
3,398,594	+		CCNA_03233	0.68	+0.5
3,398,594	+		CCNA_03233	0.68	-0.7
3,398,594	+		CCNA_03233	0.68	-0.2
3,398,594	+		CCNA_03233	0.68	+0.0
3,398,594	+		CCNA_03233	0.68	+1.4
3,398,602	-		CCNA_03233	0.68	-1.1