Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03956

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,844,248	-				+0.5
1,844,398	-		CCNA_01712	0.40	-0.1
1,844,473	-		CCNA_01712	0.59	+0.3
1,844,473	-		CCNA_01712	0.59	+0.8
1,844,508	-		CCNA_01712	0.68	+0.5
1,844,520	-		CCNA_01712	0.72	+0.4
1,844,520	-		CCNA_01712	0.72	-0.6
1,844,527	-		CCNA_01712	0.73	+0.6
1,844,541	-		CCNA_01712	0.77	+0.7
1,844,542	-		CCNA_01712	0.77	+0.5
1,844,575	-		CCNA_01712	0.86	+0.9
1,844,721	+				+0.3
1,844,735	+				+0.4
1,844,762	+				+0.2
1,844,768	+				+2.0
1,844,783	+				+0.4
1,844,823	+		CCNA_01713	0.12	-0.7
1,844,823	+		CCNA_01713	0.12	+0.0
1,844,823	+		CCNA_01713	0.12	+0.1
1,844,823	+		CCNA_01713	0.12	+0.2
1,844,823	+		CCNA_01713	0.12	+0.8
1,844,828	+		CCNA_01713	0.13	-0.1
1,844,845	+		CCNA_01713	0.16	+0.4
1,844,853	-		CCNA_01713	0.17	-0.3
1,844,857	+		CCNA_01713	0.18	+0.1
1,844,907	+		CCNA_01713	0.27	-1.3
1,844,927	+		CCNA_01713	0.30	+0.1
1,844,940	-		CCNA_01713	0.32	+0.3
1,844,962	-		CCNA_01713	0.36	-1.6
1,844,962	-		CCNA_01713	0.36	-0.0
1,845,109	-		CCNA_01713	0.62	-2.0
1,845,159	+		CCNA_01713	0.70	-0.4
1,845,193	+		CCNA_01713	0.76	+0.4
1,845,193	+		CCNA_01713	0.76	-0.8
1,845,196	-		CCNA_01713	0.77	+0.0
1,845,245	+				+0.3
1,845,253	-				-0.0
1,845,253	-				-0.2
1,845,266	+				+0.6
1,845,268	-				-0.6
1,845,268	-				-0.1
1,845,276	+				-0.1
1,845,284	-				+2.8
1,845,307	-				+0.1
1,845,307	-				-0.2
1,845,314	+				+0.4
1,845,319	+				-0.1
1,845,330	+				+0.7
1,845,338	-		CCNA_03956	0.52	+0.7
1,845,345	+		CCNA_03956	0.55	+0.8
1,845,349	+		CCNA_03956	0.58	+0.2
1,845,362	+		CCNA_03956	0.65	+0.7
1,845,362	+		CCNA_03956	0.65	+0.1
1,845,362	+		CCNA_03956	0.65	+0.3
1,845,365	-		CCNA_03956	0.66	+0.6
1,845,370	-		CCNA_03956	0.69	+0.1
1,845,396	+		CCNA_03956	0.83	+0.6
1,845,430	+				-0.3
1,845,430	+				-0.2
1,845,430	+				-0.0
1,845,430	+				+0.1
1,845,430	+				-0.0
1,845,430	+				+0.1
1,845,430	+				+0.4
1,845,430	+				-1.0
1,845,430	-				+0.2
1,845,438	-				+0.3
1,845,481	-		CCNA_01714	0.16	+0.1
1,845,503	+		CCNA_01714	0.22	-0.1
1,845,511	-		CCNA_01714	0.24	-0.5
1,845,521	+		CCNA_01714	0.27	-0.2
1,845,529	-		CCNA_01714	0.30	-0.5
1,845,596	-		CCNA_01714	0.49	-1.0
1,845,620	+		CCNA_01714	0.56	+0.2
1,845,637	+		CCNA_01714	0.61	-0.3
1,845,652	+		CCNA_01714	0.65	+0.1
1,845,652	+		CCNA_01714	0.65	-0.3
1,845,685	-		CCNA_01714	0.74	-0.3
1,845,705	+		CCNA_01714	0.80	+0.6
1,845,705	+		CCNA_01714	0.80	+0.7
1,845,706	+		CCNA_01714	0.80	+0.6
1,845,713	-		CCNA_01714	0.82	-0.1
1,845,714	-		CCNA_01714	0.83	-0.6
1,845,755	-				+0.2
1,845,762	+				+0.9
1,845,861	-				+1.7
1,845,861	-				-0.6
1,845,861	-				-1.3
1,845,862	-				-1.3
1,845,882	-				-1.1
1,845,902	+				+0.6
1,845,910	-				-1.4
1,846,089	-		CCNA_01715	0.31	+0.2
1,846,255	+		CCNA_01715	0.55	-0.3
1,846,256	-		CCNA_01715	0.55	+1.0
1,846,268	-		CCNA_01715	0.57	-1.4
1,846,272	+		CCNA_01715	0.57	+0.9
1,846,291	+		CCNA_01715	0.60	+0.4
1,846,299	-		CCNA_01715	0.61	-2.0
1,846,316	+		CCNA_01715	0.64	+0.3
1,846,403	+		CCNA_01715	0.76	+0.2