Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03892

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,626,659	+		CCNA_01517	0.11	+0.1
1,626,666	+		CCNA_01517	0.11	+1.1
1,626,679	-		CCNA_01517	0.13	+2.2
1,626,736	+		CCNA_01517	0.18	-0.3
1,626,757	-		CCNA_01517	0.20	+1.0
1,626,757	-		CCNA_01517	0.20	+0.1
1,626,770	+		CCNA_01517	0.22	+0.0
1,626,793	+		CCNA_01517	0.24	+0.2
1,626,793	+		CCNA_01517	0.24	+1.1
1,626,801	-		CCNA_01517	0.25	+1.1
1,626,801	-		CCNA_01517	0.25	+0.5
1,626,811	-		CCNA_01517	0.26	-0.1
1,626,823	+		CCNA_01517	0.27	+1.7
1,626,833	-		CCNA_01517	0.28	+0.4
1,626,961	-		CCNA_01517	0.40	+0.8
1,626,966	+		CCNA_01517	0.41	+0.7
1,626,966	+		CCNA_01517	0.41	+0.5
1,627,031	+		CCNA_01517	0.47	-0.2
1,627,084	-		CCNA_01517	0.52	+0.3
1,627,132	+		CCNA_01517	0.57	+0.1
1,627,248	+		CCNA_01517	0.68	-0.8
1,627,256	-		CCNA_01517	0.69	+1.3
1,627,272	+		CCNA_01517	0.70	+1.4
1,627,292	+		CCNA_01517	0.72	-0.7
1,627,292	+		CCNA_01517	0.72	-1.6
1,627,293	+		CCNA_01517	0.72	-0.9
1,627,293	+		CCNA_01517	0.72	+0.7
1,627,293	+		CCNA_01517	0.72	-1.9
1,627,293	+		CCNA_01517	0.72	+0.6
1,627,293	+		CCNA_01517	0.72	-0.4
1,627,308	+		CCNA_01517	0.74	+1.1
1,627,360	+		CCNA_01517	0.79	-0.1
1,627,391	-		CCNA_01517	0.82	+1.1
1,627,430	+		CCNA_01517	0.86	-0.9
1,627,462	-		CCNA_01517	0.89	+1.5
1,627,498	-				+0.9
1,627,531	-				+0.8
1,627,654	-		CCNA_03892	0.18	+0.7
1,627,706	+		CCNA_03892	0.26	-0.6
1,627,706	+		CCNA_03892	0.26	+1.1
1,627,781	+		CCNA_03892	0.38	-1.1
1,627,781	+		CCNA_03892	0.38	-0.6
1,627,789	-		CCNA_03892	0.39	+1.1
1,627,789	-		CCNA_03892	0.39	+0.5
1,627,789	-		CCNA_03892	0.39	+0.8
1,627,833	-		CCNA_03892	0.46	+0.1
1,627,868	-		CCNA_03892	0.51	+0.7
1,627,878	-		CCNA_03892	0.53	-0.2
1,627,878	-		CCNA_03892	0.53	-0.5
1,627,879	+		CCNA_03892	0.53	+0.7
1,627,957	+		CCNA_03892	0.65	+0.3
1,627,957	+		CCNA_03892	0.65	+0.5
1,627,965	-		CCNA_03892	0.66	+0.3
1,627,990	+		CCNA_03892	0.70	-1.0
1,627,993	-		CCNA_03892	0.70	+1.1
1,628,000	-		CCNA_03892	0.71	+0.7
1,628,003	-		CCNA_03892	0.72	+1.5
1,628,028	+		CCNA_03892	0.76	+0.4
1,628,041	-		CCNA_03892	0.78	+1.7
1,628,041	-		CCNA_03892	0.78	+1.2
1,628,055	+		CCNA_03892	0.80	-0.4
1,628,055	+		CCNA_03892	0.80	-1.1
1,628,055	+		CCNA_03892	0.80	-1.0
1,628,111	+		CCNA_03892	0.89	-0.2
1,628,119	-				+0.5
1,628,129	+				-0.1
1,628,154	-				+0.4
1,628,242	-				-0.4
1,628,258	-				-0.2
1,628,258	-				-0.6
1,628,319	+				-0.2
1,628,362	+				+0.8
1,628,389	-		CCNA_01519	0.12	-1.1
1,628,417	+		CCNA_01519	0.16	-0.9
1,628,463	-		CCNA_01519	0.21	-0.1
1,628,466	+		CCNA_01519	0.22	-0.5
1,628,466	+		CCNA_01519	0.22	+0.5
1,628,467	-		CCNA_01519	0.22	+0.7
1,628,469	-		CCNA_01519	0.22	+0.1
1,628,473	+		CCNA_01519	0.23	+0.4
1,628,473	+		CCNA_01519	0.23	+0.0
1,628,473	+		CCNA_01519	0.23	+0.2
1,628,473	+		CCNA_01519	0.23	+0.4
1,628,473	+		CCNA_01519	0.23	-0.0
1,628,473	+		CCNA_01519	0.23	-0.1
1,628,473	+		CCNA_01519	0.23	+0.3
1,628,473	+		CCNA_01519	0.23	-1.5
1,628,474	-		CCNA_01519	0.23	-0.9
1,628,481	-		CCNA_01519	0.23	-1.0
1,628,481	-		CCNA_01519	0.23	+0.8
1,628,481	-		CCNA_01519	0.23	-0.6
1,628,481	-		CCNA_01519	0.23	+0.8
1,628,481	-		CCNA_01519	0.23	-0.9
1,628,481	-		CCNA_01519	0.23	-0.8
1,628,481	-		CCNA_01519	0.23	-1.1
1,628,483	+		CCNA_01519	0.24	+0.2
1,628,483	+		CCNA_01519	0.24	-0.7
1,628,483	+		CCNA_01519	0.24	-0.5
1,628,483	+		CCNA_01519	0.24	-0.0
1,628,483	+		CCNA_01519	0.24	-1.2
1,628,483	+		CCNA_01519	0.24	-1.1
1,628,491	-		CCNA_01519	0.25	+0.8
1,628,538	+		CCNA_01519	0.31	+2.4
1,628,567	+		CCNA_01519	0.34	-0.5
1,628,567	+		CCNA_01519	0.34	+2.5
1,628,567	+		CCNA_01519	0.34	+2.1
1,628,575	-		CCNA_01519	0.35	-0.6
1,628,590	+		CCNA_01519	0.37	+1.0
1,628,598	-		CCNA_01519	0.38	-0.3
1,628,698	-		CCNA_01519	0.50	+0.2
1,628,702	+		CCNA_01519	0.51	-0.6
1,628,702	+		CCNA_01519	0.51	-0.3
1,628,710	-		CCNA_01519	0.52	-0.0
1,628,710	-		CCNA_01519	0.52	+1.1
1,628,726	+		CCNA_01519	0.54	+0.1
1,628,735	-		CCNA_01519	0.55	+0.7
1,628,783	-		CCNA_01519	0.61	-0.8
1,628,805	-		CCNA_01519	0.63	-1.8
1,628,805	-		CCNA_01519	0.63	-0.1
1,628,825	-		CCNA_01519	0.66	-0.1
1,628,825	-		CCNA_01519	0.66	+0.1
1,628,829	+		CCNA_01519	0.66	+0.5
1,628,864	+		CCNA_01519	0.71	-0.1
1,628,897	-		CCNA_01519	0.75	-0.8
1,628,906	+		CCNA_01519	0.76	-1.0
1,628,908	+		CCNA_01519	0.76	+0.0
1,628,908	+		CCNA_01519	0.76	-0.2
1,628,908	+		CCNA_01519	0.76	+0.2
1,628,935	-		CCNA_01519	0.79	+0.5
1,628,956	+		CCNA_01519	0.82	-1.2
1,628,970	+		CCNA_01519	0.84	-0.9
1,628,992	+		CCNA_01519	0.86	-0.4
1,629,015	-		CCNA_01519	0.89	-3.1
1,629,025	-				-0.5
1,629,026	-				+2.5
1,629,051	+				+1.0
1,629,051	+				-1.8
1,629,051	+				-1.2
1,629,051	+				+0.7
1,629,052	+				-1.3
1,629,059	-				+0.5
1,629,059	-				+0.3
1,629,059	-				-0.1
1,629,059	-				-0.3
1,629,060	-				-3.0
1,629,152	-				-0.1