Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03767
Experiment: PYE with CHIR-090 10 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with CHIR-090 10 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,933,844 | - | CCNA_03765 | 0.40 | -0.7 | |
3,933,861 | + | CCNA_03765 | 0.43 | +0.9 | |
3,933,869 | - | CCNA_03765 | 0.45 | -1.0 | |
3,933,929 | - | CCNA_03765 | 0.55 | +0.4 | |
3,933,980 | - | CCNA_03765 | 0.65 | +0.6 | |
3,933,980 | - | CCNA_03765 | 0.65 | +0.8 | |
3,933,991 | - | CCNA_03765 | 0.66 | +0.5 | |
3,933,995 | + | CCNA_03765 | 0.67 | -1.6 | |
3,934,045 | + | CCNA_03765 | 0.76 | +0.0 | |
3,934,048 | - | CCNA_03765 | 0.77 | +0.7 | |
3,934,054 | + | CCNA_03765 | 0.78 | -0.0 | |
3,934,061 | + | CCNA_03765 | 0.79 | -0.8 | |
3,934,094 | + | CCNA_03765 | 0.85 | +0.2 | |
3,934,124 | - | -0.4 | |||
3,934,129 | + | -1.4 | |||
3,934,293 | + | CCNA_03766 | 0.15 | +0.5 | |
3,934,293 | + | CCNA_03766 | 0.15 | +0.3 | |
3,934,301 | - | CCNA_03766 | 0.17 | +1.2 | |
3,934,798 | - | +0.3 | |||
3,935,015 | - | CCNA_03767 | 0.35 | +2.0 | |
3,935,015 | - | CCNA_03767 | 0.35 | -0.0 | |
3,935,419 | - | -0.8 | |||
3,935,468 | - | -0.7 | |||
3,935,478 | - | +0.3 | |||
3,935,506 | - | +1.1 | |||
3,935,557 | - | CCNA_03768 | 0.13 | -0.3 | |
3,935,611 | - | CCNA_03768 | 0.16 | -0.9 | |
3,935,611 | - | CCNA_03768 | 0.16 | -0.1 | |
3,935,611 | - | CCNA_03768 | 0.16 | +0.5 |
Or see this region's nucleotide sequence