Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03696

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,861,741	-		CCNA_03695	0.42	+1.2
3,861,756	+		CCNA_03695	0.43	-0.6
3,861,764	-		CCNA_03695	0.44	+0.0
3,861,788	-		CCNA_03695	0.45	+0.3
3,861,788	-		CCNA_03695	0.45	-0.2
3,861,838	+		CCNA_03695	0.49	+0.3
3,861,857	-		CCNA_03695	0.50	-1.3
3,861,862	-		CCNA_03695	0.50	+1.8
3,861,862	-		CCNA_03695	0.50	+0.7
3,861,876	+		CCNA_03695	0.51	-1.6
3,861,876	+		CCNA_03695	0.51	+0.3
3,861,876	+		CCNA_03695	0.51	-0.2
3,861,876	+		CCNA_03695	0.51	-0.9
3,861,883	-		CCNA_03695	0.52	-0.4
3,861,884	-		CCNA_03695	0.52	-1.4
3,861,884	-		CCNA_03695	0.52	-0.7
3,861,946	+		CCNA_03695	0.56	+0.7
3,861,953	+		CCNA_03695	0.56	+0.3
3,861,953	+		CCNA_03695	0.56	+0.4
3,861,953	+		CCNA_03695	0.56	+0.2
3,861,961	-		CCNA_03695	0.57	-0.5
3,861,961	-		CCNA_03695	0.57	+1.0
3,861,963	+		CCNA_03695	0.57	-0.1
3,861,985	-		CCNA_03695	0.58	+0.6
3,861,986	-		CCNA_03695	0.58	+1.2
3,861,986	-		CCNA_03695	0.58	-0.5
3,861,990	-		CCNA_03695	0.59	+1.1
3,861,990	-		CCNA_03695	0.59	-0.5
3,861,994	+		CCNA_03695	0.59	-0.2
3,861,995	+		CCNA_03695	0.59	-0.2
3,861,995	+		CCNA_03695	0.59	-0.2
3,861,997	-		CCNA_03695	0.59	-0.3
3,862,004	+		CCNA_03695	0.60	+0.2
3,862,007	-		CCNA_03695	0.60	-1.9
3,862,012	-		CCNA_03695	0.60	-1.7
3,862,045	+		CCNA_03695	0.62	-0.0
3,862,045	+		CCNA_03695	0.62	-0.9
3,862,059	+		CCNA_03695	0.63	+0.5
3,862,067	-		CCNA_03695	0.64	-0.1
3,862,067	-		CCNA_03695	0.64	+0.6
3,862,069	+		CCNA_03695	0.64	+0.2
3,862,077	-		CCNA_03695	0.64	-0.2
3,862,082	+		CCNA_03695	0.65	-0.0
3,862,082	+		CCNA_03695	0.65	-0.3
3,862,082	+		CCNA_03695	0.65	-0.0
3,862,082	+		CCNA_03695	0.65	-0.1
3,862,082	+		CCNA_03695	0.65	-0.0
3,862,082	+		CCNA_03695	0.65	+0.6
3,862,082	+		CCNA_03695	0.65	+0.2
3,862,082	+		CCNA_03695	0.65	+0.4
3,862,082	+		CCNA_03695	0.65	-0.5
3,862,082	+		CCNA_03695	0.65	-0.9
3,862,082	+		CCNA_03695	0.65	-0.0
3,862,082	+		CCNA_03695	0.65	+0.1
3,862,082	+		CCNA_03695	0.65	-0.4
3,862,082	+		CCNA_03695	0.65	+0.8
3,862,082	+		CCNA_03695	0.65	+0.2
3,862,082	+		CCNA_03695	0.65	+0.0
3,862,082	+		CCNA_03695	0.65	-0.7
3,862,082	+		CCNA_03695	0.65	-0.5
3,862,082	+		CCNA_03695	0.65	-0.0
3,862,090	-		CCNA_03695	0.65	-0.8
3,862,090	-		CCNA_03695	0.65	-0.4
3,862,090	-		CCNA_03695	0.65	-0.9
3,862,090	-		CCNA_03695	0.65	+0.3
3,862,090	-		CCNA_03695	0.65	-1.1
3,862,090	-		CCNA_03695	0.65	-0.8
3,862,090	-		CCNA_03695	0.65	-0.9
3,862,090	-		CCNA_03695	0.65	-0.6
3,862,090	-		CCNA_03695	0.65	-1.2
3,862,090	-		CCNA_03695	0.65	+1.2
3,862,119	+		CCNA_03695	0.67	-0.1
3,862,203	-		CCNA_03695	0.73	-0.9
3,862,208	-		CCNA_03695	0.73	-0.2
3,862,210	+		CCNA_03695	0.73	+0.3
3,862,311	+		CCNA_03695	0.80	+0.2
3,862,339	-		CCNA_03695	0.82	-0.2
3,862,341	-		CCNA_03695	0.82	-0.7
3,862,349	-		CCNA_03695	0.82	+0.0
3,862,352	+		CCNA_03695	0.82	-0.3
3,862,352	+		CCNA_03695	0.82	-0.1
3,862,360	-		CCNA_03695	0.83	-0.2
3,862,360	-		CCNA_03695	0.83	-0.1
3,862,376	+		CCNA_03695	0.84	-0.2
3,862,376	+		CCNA_03695	0.84	-0.6
3,862,391	-		CCNA_03695	0.85	+0.9
3,862,456	+		CCNA_03695	0.89	-0.5
3,862,456	+		CCNA_03695	0.89	-1.0
3,862,456	+		CCNA_03695	0.89	+0.5
3,862,464	-		CCNA_03695	0.90	-0.3
3,862,464	-		CCNA_03695	0.90	-0.6
3,862,504	-				+0.5
3,862,506	+				-0.1
3,862,557	+				-0.0
3,862,565	-				+0.1
3,862,593	+				-0.6
3,862,612	+				+0.0
3,862,617	+				-0.1
3,862,620	-				+1.0
3,862,620	-				+0.2
3,862,620	-				+0.8
3,862,625	-				+0.1
3,862,625	-				-1.3
3,862,661	+				-0.4
3,862,690	+				+1.5
3,862,690	+				-0.4
3,862,698	-				+0.4
3,862,704	-				-0.1
3,862,724	-				-0.3
3,862,724	-				-0.1
3,862,738	-				-1.2
3,862,812	+				+0.1
3,862,820	-				-1.3
3,862,823	+				-0.4
3,862,835	+				-0.3
3,862,884	+				+0.4
3,862,903	-				-0.8
3,862,903	-				-0.8
3,862,907	+				+0.5
3,862,936	+		CCNA_03696	0.11	-0.2
3,863,013	+		CCNA_03696	0.15	+0.2
3,863,021	-		CCNA_03696	0.15	+0.2
3,863,021	-		CCNA_03696	0.15	+0.1
3,863,052	-		CCNA_03696	0.17	-0.8
3,863,057	+		CCNA_03696	0.17	+0.9
3,863,081	+		CCNA_03696	0.18	+0.2
3,863,089	-		CCNA_03696	0.18	-0.2
3,863,116	+		CCNA_03696	0.20	+0.9
3,863,123	-		CCNA_03696	0.20	-0.8
3,863,169	+		CCNA_03696	0.23	+0.0
3,863,181	-		CCNA_03696	0.23	-1.0
3,863,195	+		CCNA_03696	0.24	+0.1
3,863,250	-		CCNA_03696	0.27	-1.4
3,863,256	+		CCNA_03696	0.27	+0.1
3,863,264	-		CCNA_03696	0.27	-0.1
3,863,264	-		CCNA_03696	0.27	-0.1
3,863,268	+		CCNA_03696	0.28	+0.9
3,863,276	+		CCNA_03696	0.28	-0.2
3,863,346	+		CCNA_03696	0.32	+0.6
3,863,346	+		CCNA_03696	0.32	+0.4
3,863,354	+		CCNA_03696	0.32	-0.2
3,863,359	+		CCNA_03696	0.32	+0.1
3,863,367	-		CCNA_03696	0.33	-0.4
3,863,367	-		CCNA_03696	0.33	+1.4
3,863,398	+		CCNA_03696	0.34	+2.1
3,863,437	+		CCNA_03696	0.36	+3.0
3,863,510	+		CCNA_03696	0.40	+0.8
3,863,518	-		CCNA_03696	0.40	-0.0
3,863,537	+		CCNA_03696	0.41	+0.1
3,863,537	+		CCNA_03696	0.41	-0.1
3,863,537	+		CCNA_03696	0.41	-0.1
3,863,537	+		CCNA_03696	0.41	-0.2
3,863,537	+		CCNA_03696	0.41	-0.0
3,863,537	+		CCNA_03696	0.41	+0.4
3,863,537	+		CCNA_03696	0.41	+2.1
3,863,537	+		CCNA_03696	0.41	+0.8
3,863,537	+		CCNA_03696	0.41	-0.3
3,863,537	+		CCNA_03696	0.41	+0.3
3,863,544	+		CCNA_03696	0.42	+0.4
3,863,545	-		CCNA_03696	0.42	+0.6
3,863,545	-		CCNA_03696	0.42	-1.4
3,863,545	-		CCNA_03696	0.42	-1.0
3,863,545	-		CCNA_03696	0.42	-0.2
3,863,545	-		CCNA_03696	0.42	-0.1
3,863,545	-		CCNA_03696	0.42	+2.2
3,863,545	-		CCNA_03696	0.42	+0.0
3,863,545	-		CCNA_03696	0.42	-1.5
3,863,545	-		CCNA_03696	0.42	-1.7
3,863,545	-		CCNA_03696	0.42	-1.5
3,863,545	-		CCNA_03696	0.42	+0.4
3,863,545	-		CCNA_03696	0.42	-0.6
3,863,545	-		CCNA_03696	0.42	-0.6
3,863,545	-		CCNA_03696	0.42	+0.3
3,863,545	-		CCNA_03696	0.42	-1.4
3,863,555	-		CCNA_03696	0.42	+0.7
3,863,576	-		CCNA_03696	0.43	-2.1
3,863,581	-		CCNA_03696	0.44	-2.5
3,863,581	-		CCNA_03696	0.44	-0.0
3,863,582	+		CCNA_03696	0.44	+0.1
3,863,593	+		CCNA_03696	0.44	+0.3
3,863,599	-		CCNA_03696	0.45	+0.0
3,863,609	-		CCNA_03696	0.45	-1.6
3,863,625	+		CCNA_03696	0.46	-1.9
3,863,625	+		CCNA_03696	0.46	+0.3
3,863,638	+		CCNA_03696	0.47	+0.0
3,863,669	-		CCNA_03696	0.48	-2.6
3,863,674	-		CCNA_03696	0.49	+0.8
3,863,674	-		CCNA_03696	0.49	-0.8
3,863,674	-		CCNA_03696	0.49	+0.9
3,863,696	+		CCNA_03696	0.50	+0.3
3,863,706	+		CCNA_03696	0.50	-0.6
3,863,707	+		CCNA_03696	0.50	+0.1
3,863,714	+		CCNA_03696	0.51	-0.2
3,863,747	-		CCNA_03696	0.52	-1.8
3,863,750	+		CCNA_03696	0.52	+0.4
3,863,752	+		CCNA_03696	0.53	+0.7
3,863,786	+		CCNA_03696	0.54	-0.1
3,863,786	+		CCNA_03696	0.54	-0.2
3,863,794	-		CCNA_03696	0.55	-0.2
3,863,794	-		CCNA_03696	0.55	-0.5
3,863,794	-		CCNA_03696	0.55	+0.9
3,863,794	-		CCNA_03696	0.55	-0.7
3,863,829	+		CCNA_03696	0.56	+0.3
3,863,838	+		CCNA_03696	0.57	+0.2
3,863,863	-		CCNA_03696	0.58	-0.6
3,864,027	-		CCNA_03696	0.67	-0.4
3,864,089	+		CCNA_03696	0.70	+0.4
3,864,119	+		CCNA_03696	0.71	+0.6
3,864,141	+		CCNA_03696	0.73	+0.1
3,864,176	-		CCNA_03696	0.74	+0.0
3,864,212	+		CCNA_03696	0.76	+0.8
3,864,310	+		CCNA_03696	0.81	+0.2
3,864,345	-		CCNA_03696	0.83	+0.2
3,864,371	-		CCNA_03696	0.84	-0.5
3,864,410	-		CCNA_03696	0.86	-0.7
3,864,410	-		CCNA_03696	0.86	-0.3
3,864,426	+		CCNA_03696	0.87	-0.3
3,864,452	+		CCNA_03696	0.89	-0.4
3,864,466	+		CCNA_03696	0.89	-0.7
3,864,492	-				-1.1
3,864,530	-				-0.7
3,864,530	-				+1.0
3,864,530	-				-0.5
3,864,533	+				-0.8
3,864,541	-				-2.1
3,864,557	-				-1.2
3,864,601	+				+0.9
3,864,613	+				-0.3
3,864,613	-				+0.4
3,864,619	-				+0.0
3,864,687	-				+0.2
3,864,696	+				-0.3
3,864,734	-				-0.3
3,864,765	+		CCNA_03697	0.10	+1.2
3,864,765	+		CCNA_03697	0.10	+0.4
3,864,765	+		CCNA_03697	0.10	+0.2
3,864,773	-		CCNA_03697	0.12	-0.0
3,864,773	-		CCNA_03697	0.12	+0.1
3,864,773	-		CCNA_03697	0.12	-0.1
3,864,773	-		CCNA_03697	0.12	+0.4
3,864,773	-		CCNA_03697	0.12	+0.0
3,864,785	+		CCNA_03697	0.14	-0.1
3,864,800	+		CCNA_03697	0.16	-2.1
3,864,800	+		CCNA_03697	0.16	+0.3
3,864,808	-		CCNA_03697	0.18	-1.4
3,864,808	-		CCNA_03697	0.18	+0.4
3,864,827	-		CCNA_03697	0.21	-0.7
3,864,886	-		CCNA_03697	0.32	+0.1
3,864,888	+		CCNA_03697	0.32	+0.3
3,864,945	-		CCNA_03697	0.42	-0.1
3,864,964	+		CCNA_03697	0.46	-0.0
3,864,964	+		CCNA_03697	0.46	-1.0
3,864,964	+		CCNA_03697	0.46	+0.9
3,864,972	-		CCNA_03697	0.47	+0.8
3,864,972	-		CCNA_03697	0.47	-0.2
3,864,972	-		CCNA_03697	0.47	-0.5
3,864,972	-		CCNA_03697	0.47	+0.4
3,864,972	-		CCNA_03697	0.47	-0.4
3,864,972	-		CCNA_03697	0.47	+0.7
3,864,985	+		CCNA_03697	0.50	-0.2
3,865,093	+		CCNA_03697	0.69	-1.2
3,865,147	+		CCNA_03697	0.79	-0.3
3,865,154	+		CCNA_03697	0.80	+0.2
3,865,155	+		CCNA_03697	0.80	+0.0
3,865,163	-		CCNA_03697	0.82	-0.4
3,865,216	-				+0.0
3,865,266	-				-0.5
3,865,270	+				+0.6
3,865,277	-				-0.5
3,865,285	+				+0.0
3,865,287	-				-0.2
3,865,293	+				+0.0
3,865,293	+				-0.2
3,865,293	-				-0.1
3,865,319	-		CCNA_03698	0.16	+0.2
3,865,319	-		CCNA_03698	0.16	-0.6
3,865,334	-		CCNA_03698	0.19	+0.9
3,865,344	-		CCNA_03698	0.22	+0.8
3,865,348	+		CCNA_03698	0.23	+0.8
3,865,348	+		CCNA_03698	0.23	-0.6
3,865,356	-		CCNA_03698	0.24	+0.6
3,865,356	-		CCNA_03698	0.24	+0.6
3,865,356	-		CCNA_03698	0.24	+0.8
3,865,471	+		CCNA_03698	0.51	-0.1
3,865,486	-		CCNA_03698	0.54	-0.2
3,865,533	+		CCNA_03698	0.65	-0.1
3,865,543	+		CCNA_03698	0.67	-0.0
3,865,569	+		CCNA_03698	0.73	-0.7
3,865,583	+		CCNA_03698	0.77	+0.5
3,865,634	-		CCNA_03698	0.88	+0.3
3,865,636	+		CCNA_03698	0.89	+0.3
3,865,652	-				-2.0