Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03579

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,735,902	+		CCNA_03578	0.49	-0.8
3,735,910	-		CCNA_03578	0.49	-1.5
3,736,012	+		CCNA_03578	0.54	+0.4
3,736,012	+		CCNA_03578	0.54	+0.2
3,736,015	-		CCNA_03578	0.55	-0.7
3,736,042	+		CCNA_03578	0.56	+0.6
3,736,042	+		CCNA_03578	0.56	-0.6
3,736,042	+		CCNA_03578	0.56	-0.8
3,736,042	+		CCNA_03578	0.56	-0.2
3,736,050	-		CCNA_03578	0.57	-1.4
3,736,050	-		CCNA_03578	0.57	+0.7
3,736,050	-		CCNA_03578	0.57	+0.5
3,736,050	-		CCNA_03578	0.57	+0.8
3,736,050	-		CCNA_03578	0.57	-0.4
3,736,050	-		CCNA_03578	0.57	+0.9
3,736,050	-		CCNA_03578	0.57	-2.6
3,736,050	-		CCNA_03578	0.57	-0.3
3,736,087	+		CCNA_03578	0.59	+0.6
3,736,087	+		CCNA_03578	0.59	+0.0
3,736,120	+		CCNA_03578	0.60	-0.2
3,736,120	+		CCNA_03578	0.60	-0.2
3,736,128	-		CCNA_03578	0.61	+0.1
3,736,128	-		CCNA_03578	0.61	-2.1
3,736,128	-		CCNA_03578	0.61	-1.0
3,736,128	-		CCNA_03578	0.61	-0.0
3,736,128	-		CCNA_03578	0.61	+0.2
3,736,128	-		CCNA_03578	0.61	+0.4
3,736,138	-		CCNA_03578	0.61	-0.3
3,736,140	-		CCNA_03578	0.61	+0.8
3,736,198	+		CCNA_03578	0.65	+0.1
3,736,237	+		CCNA_03578	0.67	-0.1
3,736,256	+		CCNA_03578	0.68	+0.7
3,736,264	-		CCNA_03578	0.68	+0.2
3,736,264	-		CCNA_03578	0.68	-2.5
3,736,301	+		CCNA_03578	0.70	+0.5
3,736,301	+		CCNA_03578	0.70	+0.1
3,736,319	-		CCNA_03578	0.71	+0.1
3,736,336	+		CCNA_03578	0.72	+0.3
3,736,336	+		CCNA_03578	0.72	+0.3
3,736,344	-		CCNA_03578	0.72	+0.2
3,736,344	-		CCNA_03578	0.72	+0.2
3,736,345	+		CCNA_03578	0.73	-0.4
3,736,350	+		CCNA_03578	0.73	-0.7
3,736,353	-		CCNA_03578	0.73	+1.1
3,736,375	-		CCNA_03578	0.74	+0.0
3,736,383	-		CCNA_03578	0.75	+1.1
3,736,418	+		CCNA_03578	0.76	+1.0
3,736,418	-		CCNA_03578	0.76	-0.0
3,736,427	+		CCNA_03578	0.77	-0.0
3,736,533	+		CCNA_03578	0.83	+1.2
3,736,536	-		CCNA_03578	0.83	+1.4
3,736,551	-		CCNA_03578	0.84	-0.1
3,736,648	+		CCNA_03578	0.89	+0.1
3,736,656	-		CCNA_03578	0.89	+0.1
3,736,697	+				+0.6
3,736,730	-				+0.0
3,736,730	-				+1.0
3,736,763	-				+0.2
3,736,793	+				-0.2
3,736,793	+				+1.2
3,736,801	-				+0.1
3,736,801	-				-1.4
3,736,880	-				-0.9
3,736,894	+				+0.2
3,736,920	-				-0.2
3,737,015	-		CCNA_03579	0.38	+0.5
3,737,027	-		CCNA_03579	0.42	+1.3
3,737,032	+		CCNA_03579	0.44	-0.8
3,737,038	+		CCNA_03579	0.46	-0.9
3,737,069	-		CCNA_03579	0.56	+0.4
3,737,076	+		CCNA_03579	0.58	+0.0
3,737,085	-		CCNA_03579	0.61	-0.7
3,737,094	+		CCNA_03579	0.64	+2.3
3,737,102	-		CCNA_03579	0.66	-0.9
3,737,104	+		CCNA_03579	0.67	-2.0
3,737,113	-		CCNA_03579	0.70	+0.1
3,737,134	+		CCNA_03579	0.77	+1.7
3,737,156	+		CCNA_03579	0.84	-1.1
3,737,156	+		CCNA_03579	0.84	+1.7
3,737,170	-		CCNA_03579	0.88	+0.8
3,737,174	-		CCNA_03579	0.90	+2.6
3,737,240	-				-1.1
3,737,242	-				-0.1
3,737,318	+				-0.0
3,737,333	-				+0.6
3,737,340	-				+0.1
3,737,363	-				+0.1
3,737,369	-				+0.7
3,737,390	+				+0.7
3,737,390	+				+0.3
3,737,390	+				+0.9
3,737,398	-				+2.1
3,737,398	-				-0.6
3,737,398	-				-1.3
3,737,398	-				-0.4
3,737,398	-				-0.1
3,737,398	-				+0.1
3,737,398	-				-0.8
3,737,398	-				-0.5
3,737,436	-				-0.0
3,737,446	+				+0.0
3,737,454	-				-0.6
3,737,471	-				-0.2
3,737,508	+		CCNA_03580	0.14	-2.1
3,737,516	-		CCNA_03580	0.16	-0.7
3,737,516	-		CCNA_03580	0.16	+0.3
3,737,516	-		CCNA_03580	0.16	-1.2
3,737,516	-		CCNA_03580	0.16	+1.0
3,737,523	-		CCNA_03580	0.18	+1.0
3,737,541	+		CCNA_03580	0.22	-0.2
3,737,594	+		CCNA_03580	0.33	+0.4
3,737,653	+		CCNA_03580	0.46	-0.9
3,737,654	-		CCNA_03580	0.46	+0.2
3,737,664	-		CCNA_03580	0.48	+0.2
3,737,666	+		CCNA_03580	0.49	-0.6
3,737,666	+		CCNA_03580	0.49	+0.4
3,737,677	+		CCNA_03580	0.51	-2.3
3,737,743	-		CCNA_03580	0.66	+0.6
3,737,811	+		CCNA_03580	0.80	+0.4
3,737,819	-		CCNA_03580	0.82	-0.3
3,737,868	-				+0.2
3,737,876	+				+0.3
3,737,989	+				+1.0
3,738,019	+				+0.9
3,738,032	-				-0.9
3,738,080	+				+0.0
3,738,142	+		CCNA_03581	0.16	-0.0
3,738,150	-		CCNA_03581	0.17	-1.6
3,738,169	+		CCNA_03581	0.20	+1.2
3,738,191	-		CCNA_03581	0.22	+0.5