Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03496

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,654,213	-				+0.6
3,654,228	-				+0.4
3,654,348	+		CCNA_03495	0.11	-0.8
3,654,392	+		CCNA_03495	0.16	-0.9
3,654,392	+		CCNA_03495	0.16	+0.4
3,654,400	-		CCNA_03495	0.17	-0.5
3,654,405	-		CCNA_03495	0.18	+0.6
3,654,407	+		CCNA_03495	0.18	-0.1
3,654,407	+		CCNA_03495	0.18	-1.9
3,654,446	-		CCNA_03495	0.23	+0.7
3,654,446	-		CCNA_03495	0.23	+0.2
3,654,490	-		CCNA_03495	0.28	+1.1
3,654,513	+		CCNA_03495	0.31	+0.4
3,654,521	-		CCNA_03495	0.32	+0.5
3,654,529	+		CCNA_03495	0.33	+0.6
3,654,537	-		CCNA_03495	0.34	+0.0
3,654,548	+		CCNA_03495	0.36	+1.1
3,654,551	-		CCNA_03495	0.36	+0.5
3,654,551	-		CCNA_03495	0.36	-0.4
3,654,551	-		CCNA_03495	0.36	+0.9
3,654,561	+		CCNA_03495	0.37	-0.2
3,654,577	+		CCNA_03495	0.39	+0.5
3,654,590	+		CCNA_03495	0.41	-0.9
3,654,596	-		CCNA_03495	0.42	-0.3
3,654,604	+		CCNA_03495	0.43	+0.8
3,654,611	+		CCNA_03495	0.44	-0.5
3,654,611	+		CCNA_03495	0.44	-0.8
3,654,619	-		CCNA_03495	0.45	-0.1
3,654,627	+		CCNA_03495	0.46	+0.8
3,654,647	+		CCNA_03495	0.48	+0.2
3,654,655	-		CCNA_03495	0.49	+0.1
3,654,676	+		CCNA_03495	0.52	-0.8
3,654,693	+		CCNA_03495	0.54	-0.9
3,654,711	-		CCNA_03495	0.56	+0.4
3,654,743	+		CCNA_03495	0.60	-1.6
3,654,743	+		CCNA_03495	0.60	-1.5
3,654,758	-		CCNA_03495	0.62	+0.7
3,654,787	-		CCNA_03495	0.66	+0.5
3,654,799	-		CCNA_03495	0.67	-0.1
3,654,818	-		CCNA_03495	0.70	+0.3
3,654,855	-		CCNA_03495	0.74	-0.3
3,654,856	+		CCNA_03495	0.74	+0.1
3,654,877	+		CCNA_03495	0.77	+0.4
3,654,885	-		CCNA_03495	0.78	+1.2
3,654,891	+		CCNA_03495	0.79	+0.4
3,654,927	-		CCNA_03495	0.83	+0.2
3,654,962	+		CCNA_03495	0.88	-0.3
3,654,970	-		CCNA_03495	0.89	+0.2
3,654,970	-		CCNA_03495	0.89	-0.3
3,654,992	-				+0.7
3,655,068	+				-0.3
3,655,068	+				-0.8
3,655,068	+				-1.8
3,655,076	-				+0.6
3,655,076	-				-1.1
3,655,076	-				+0.7
3,655,132	-				+0.6
3,655,449	+		CCNA_03496	0.38	+0.1
3,655,737	-		CCNA_03496	0.75	-0.8
3,655,872	+				-1.0
3,655,881	-				-0.4
3,655,939	-				+0.5
3,655,941	+				-1.5
3,656,118	+		CCNA_03497	0.13	+0.1
3,656,144	+		CCNA_03497	0.18	+0.2
3,656,155	+		CCNA_03497	0.21	+1.4
3,656,163	-		CCNA_03497	0.23	-0.9
3,656,168	-		CCNA_03497	0.24	+0.6
3,656,177	-		CCNA_03497	0.26	-0.1
3,656,208	+		CCNA_03497	0.32	-0.1
3,656,217	-		CCNA_03497	0.34	-1.4
3,656,225	+		CCNA_03497	0.36	+1.5
3,656,256	-		CCNA_03497	0.43	-1.6
3,656,276	+		CCNA_03497	0.47	+0.2
3,656,302	-		CCNA_03497	0.53	-0.6
3,656,338	+		CCNA_03497	0.61	+0.3
3,656,338	+		CCNA_03497	0.61	-0.9
3,656,346	-		CCNA_03497	0.63	-0.7
3,656,412	+		CCNA_03497	0.77	+0.0
3,656,498	+				+0.5
3,656,504	+				+0.7
3,656,512	-				-1.0
3,656,512	-				+0.8
3,656,512	-				-2.3
3,656,519	+				-0.2
3,656,529	-				-0.8
3,656,612	+		CCNA_03498	0.34	+0.6
3,656,612	+		CCNA_03498	0.34	-0.6
3,656,612	+		CCNA_03498	0.34	+0.1
3,656,612	+		CCNA_03498	0.34	+0.1
3,656,647	+		CCNA_03498	0.46	+0.3
3,656,655	+		CCNA_03498	0.49	+0.5
3,656,680	+		CCNA_03498	0.57	+0.1
3,656,728	+		CCNA_03498	0.73	-1.3
3,656,747	+		CCNA_03498	0.80	-1.0
3,656,810	+				+1.3
3,656,817	+				-0.1
3,656,825	-				+0.1
3,656,825	-				+1.4
3,656,849	+				-0.5
3,656,857	+				-0.0
3,656,857	+				-0.5
3,656,857	+				-2.1
3,656,865	-				-0.5
3,656,865	-				+1.2
3,656,865	-				-0.4
3,656,865	-				+0.7
3,656,865	-				+0.1
3,656,865	-				+0.0
3,656,874	+				-1.0
3,656,879	+				+0.4
3,656,882	-		CCNA_03499	0.10	-2.2
3,656,882	-		CCNA_03499	0.10	-0.1
3,656,890	+		CCNA_03499	0.13	-0.7
3,656,904	+		CCNA_03499	0.17	+2.1