Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03487

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,647,708	+		CCNA_03485	0.64	-1.7
3,647,713	+		CCNA_03485	0.64	-0.1
3,647,716	-		CCNA_03485	0.65	-0.2
3,647,716	-		CCNA_03485	0.65	+0.2
3,647,743	+		CCNA_03485	0.67	+0.6
3,647,747	-		CCNA_03485	0.68	+0.2
3,647,751	-		CCNA_03485	0.68	+0.1
3,647,812	-		CCNA_03485	0.74	+0.7
3,647,823	+		CCNA_03485	0.75	-0.7
3,647,842	-		CCNA_03485	0.77	+0.9
3,647,859	+		CCNA_03485	0.79	-0.3
3,647,866	-		CCNA_03485	0.80	+0.1
3,647,866	-		CCNA_03485	0.80	-0.6
3,647,867	-		CCNA_03485	0.80	-0.4
3,647,873	+		CCNA_03485	0.81	-1.4
3,647,934	-		CCNA_03485	0.87	+0.3
3,647,960	+		CCNA_03485	0.90	-0.1
3,647,967	+				+0.0
3,647,967	+				-0.4
3,647,975	-				-1.1
3,648,048	+				-1.2
3,648,095	-				+0.2
3,648,102	-				-1.0
3,648,162	+		CCNA_03486	0.15	-0.6
3,648,163	+		CCNA_03486	0.16	+0.3
3,648,163	+		CCNA_03486	0.16	-2.2
3,648,163	+		CCNA_03486	0.16	-0.6
3,648,163	+		CCNA_03486	0.16	+0.3
3,648,171	-		CCNA_03486	0.17	+0.4
3,648,171	-		CCNA_03486	0.17	+0.1
3,648,171	-		CCNA_03486	0.17	+0.9
3,648,180	+		CCNA_03486	0.20	+0.1
3,648,181	-		CCNA_03486	0.20	+0.5
3,648,181	-		CCNA_03486	0.20	-0.2
3,648,186	+		CCNA_03486	0.21	-1.0
3,648,186	+		CCNA_03486	0.21	+1.2
3,648,194	-		CCNA_03486	0.23	+0.0
3,648,194	-		CCNA_03486	0.23	-0.1
3,648,194	-		CCNA_03486	0.23	-0.0
3,648,215	-		CCNA_03486	0.28	+0.8
3,648,274	+		CCNA_03486	0.41	+0.1
3,648,274	+		CCNA_03486	0.41	+0.7
3,648,276	+		CCNA_03486	0.42	+0.4
3,648,282	-		CCNA_03486	0.43	-0.5
3,648,282	-		CCNA_03486	0.43	+0.0
3,648,282	-		CCNA_03486	0.43	-0.1
3,648,282	-		CCNA_03486	0.43	+0.4
3,648,291	+		CCNA_03486	0.45	+0.0
3,648,314	-		CCNA_03486	0.51	+0.3
3,648,320	+		CCNA_03486	0.52	-1.2
3,648,320	+		CCNA_03486	0.52	-0.8
3,648,328	-		CCNA_03486	0.54	-0.1
3,648,352	+		CCNA_03486	0.60	-0.4
3,648,360	-		CCNA_03486	0.62	+0.1
3,648,360	-		CCNA_03486	0.62	-0.0
3,648,360	-		CCNA_03486	0.62	+0.1
3,648,360	-		CCNA_03486	0.62	+0.1
3,648,365	-		CCNA_03486	0.63	-0.4
3,648,375	-		CCNA_03486	0.65	+0.6
3,648,410	+		CCNA_03486	0.73	-0.8
3,648,410	+		CCNA_03486	0.73	-0.9
3,648,497	-				+0.2
3,648,550	-				+0.2
3,648,670	+				-2.4
3,648,704	-				+0.8
3,648,714	-		CCNA_03487	0.12	+0.0
3,648,716	+		CCNA_03487	0.13	-1.8
3,648,767	-		CCNA_03487	0.35	-1.5
3,648,849	-		CCNA_03487	0.71	-1.2
3,648,926	-				+0.9
3,648,928	+				-1.6
3,648,936	-				-1.2
3,648,936	-				+0.4
3,648,968	-		CCNA_03488	0.11	+0.3
3,648,968	-		CCNA_03488	0.11	+0.9
3,648,994	+		CCNA_03488	0.15	+0.5
3,649,054	+		CCNA_03488	0.26	+1.3
3,649,110	-		CCNA_03488	0.37	+0.3
3,649,113	+		CCNA_03488	0.37	-0.2
3,649,118	+		CCNA_03488	0.38	+0.2
3,649,121	-		CCNA_03488	0.39	-1.1
3,649,121	-		CCNA_03488	0.39	-0.7
3,649,173	+		CCNA_03488	0.49	-0.5
3,649,173	-		CCNA_03488	0.49	-0.2
3,649,217	-		CCNA_03488	0.57	-0.5
3,649,234	+		CCNA_03488	0.60	+0.1
3,649,242	+		CCNA_03488	0.61	-1.4
3,649,242	+		CCNA_03488	0.61	+0.0
3,649,242	+		CCNA_03488	0.61	+0.2
3,649,242	+		CCNA_03488	0.61	+0.2
3,649,242	+		CCNA_03488	0.61	+0.5
3,649,242	+		CCNA_03488	0.61	-0.6
3,649,250	-		CCNA_03488	0.63	-0.1
3,649,250	-		CCNA_03488	0.63	+0.0
3,649,250	-		CCNA_03488	0.63	+0.1
3,649,276	+		CCNA_03488	0.68	-0.7
3,649,310	+		CCNA_03488	0.74	-0.9
3,649,367	+		CCNA_03488	0.84	+0.0
3,649,404	+				+1.2
3,649,404	+				+0.2
3,649,412	-				-0.2
3,649,427	+				+1.8
3,649,427	+				+0.4
3,649,427	+				-0.3
3,649,427	+				-0.0
3,649,459	+				-0.4
3,649,467	-				-0.6
3,649,473	+				-0.5
3,649,481	-				+0.2
3,649,513	+				+0.7
3,649,518	+				+0.2
3,649,518	+				-0.1
3,649,521	-				-0.4
3,649,582	+				-0.0
3,649,592	+				-0.5
3,649,595	-				+0.1
3,649,605	-				-0.7
3,649,609	+				+0.4
3,649,652	-				-0.2
3,649,665	+		CCNA_03489	0.11	+0.5
3,649,686	+		CCNA_03489	0.13	+1.5
3,649,689	-		CCNA_03489	0.13	-0.5
3,649,774	+		CCNA_03489	0.22	-0.7
3,649,774	+		CCNA_03489	0.22	-1.4
3,649,791	-		CCNA_03489	0.24	-1.5
3,649,796	+		CCNA_03489	0.24	+0.7
3,649,796	-		CCNA_03489	0.24	-0.4
3,649,810	+		CCNA_03489	0.26	+0.9
3,649,818	-		CCNA_03489	0.26	-1.0
3,649,818	-		CCNA_03489	0.26	+0.9
3,649,854	-		CCNA_03489	0.30	+2.5
3,649,882	+		CCNA_03489	0.33	-1.2
3,649,902	+		CCNA_03489	0.35	+0.8