Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03445

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,607,710	+		CCNA_03444	0.67	+0.1
3,607,716	-		CCNA_03444	0.67	-0.2
3,607,731	+		CCNA_03444	0.68	-1.4
3,607,731	+		CCNA_03444	0.68	-1.3
3,607,731	+		CCNA_03444	0.68	-3.2
3,607,768	+		CCNA_03444	0.69	+0.3
3,607,768	+		CCNA_03444	0.69	+0.5
3,607,768	+		CCNA_03444	0.69	-0.5
3,607,794	+		CCNA_03444	0.70	-0.6
3,607,794	+		CCNA_03444	0.70	-1.0
3,607,802	-		CCNA_03444	0.71	-1.0
3,607,802	-		CCNA_03444	0.71	+0.8
3,607,856	-		CCNA_03444	0.73	+0.1
3,607,856	-		CCNA_03444	0.73	+0.1
3,607,874	+		CCNA_03444	0.74	-0.5
3,607,882	-		CCNA_03444	0.74	+1.6
3,607,884	+		CCNA_03444	0.74	-0.3
3,607,889	+		CCNA_03444	0.74	+0.5
3,607,894	+		CCNA_03444	0.74	+0.5
3,607,894	+		CCNA_03444	0.74	+0.7
3,607,897	-		CCNA_03444	0.75	-0.1
3,607,897	-		CCNA_03444	0.75	-0.2
3,607,897	-		CCNA_03444	0.75	+0.0
3,607,929	+		CCNA_03444	0.76	-1.0
3,607,930	-		CCNA_03444	0.76	-0.6
3,607,944	-		CCNA_03444	0.76	+0.3
3,607,948	+		CCNA_03444	0.77	+1.4
3,607,956	-		CCNA_03444	0.77	+0.4
3,607,989	+		CCNA_03444	0.78	-1.0
3,607,998	-		CCNA_03444	0.79	-2.6
3,608,045	+		CCNA_03444	0.80	-0.5
3,608,054	+		CCNA_03444	0.81	-0.4
3,608,062	-		CCNA_03444	0.81	-0.8
3,608,114	+		CCNA_03444	0.83	+0.2
3,608,114	+		CCNA_03444	0.83	+0.4
3,608,115	-		CCNA_03444	0.83	-2.4
3,608,122	-		CCNA_03444	0.83	-0.1
3,608,122	-		CCNA_03444	0.83	-1.5
3,608,122	-		CCNA_03444	0.83	+0.6
3,608,189	-		CCNA_03444	0.86	+1.2
3,608,214	-		CCNA_03444	0.87	-1.3
3,608,218	+		CCNA_03444	0.87	+0.4
3,608,218	+		CCNA_03444	0.87	+0.0
3,608,244	-		CCNA_03444	0.88	-0.4
3,608,248	+		CCNA_03444	0.89	+0.4
3,608,248	+		CCNA_03444	0.89	+0.0
3,608,249	-		CCNA_03444	0.89	-0.1
3,608,254	-		CCNA_03444	0.89	-1.8
3,608,254	-		CCNA_03444	0.89	-0.1
3,608,254	-		CCNA_03444	0.89	-0.4
3,608,259	+		CCNA_03444	0.89	-0.6
3,608,264	+		CCNA_03444	0.89	+0.4
3,608,267	-		CCNA_03444	0.89	-0.3
3,608,277	-		CCNA_03444	0.90	+0.2
3,608,302	+				+0.5
3,608,318	+				+0.0
3,608,318	+				-1.4
3,608,326	-				-0.9
3,608,333	+				-0.3
3,608,338	+				-0.6
3,608,346	-				-0.5
3,608,360	+				-0.2
3,608,368	-				-0.3
3,608,368	-				-1.0
3,608,368	-				+0.8
3,608,396	+				-0.1
3,608,414	-				+0.5
3,608,416	-				+0.2
3,608,438	+				+0.0
3,608,446	-				-0.1
3,608,448	+				-1.4
3,608,448	+				-0.2
3,608,456	-				-1.4
3,608,456	-				+1.2
3,608,475	+				+0.3
3,608,479	-				-2.3
3,608,505	+				+0.2
3,608,511	+				+0.0
3,608,517	-				-0.6
3,608,549	-				-0.8
3,608,629	+				+0.6
3,608,629	+				+0.1
3,608,653	-				-0.2
3,608,673	-				-0.1
3,608,705	+				+1.1
3,608,740	+				+0.2
3,608,748	-				+0.8
3,608,894	-				+0.1
3,608,900	+				+0.3
3,608,938	+				+1.1
3,608,946	+				+0.6
3,608,946	+				+0.3
3,608,946	-				-0.0
3,608,954	-		CCNA_03445	0.10	+0.5
3,608,969	-		CCNA_03445	0.11	+1.0
3,608,969	-		CCNA_03445	0.11	+0.3
3,608,969	-		CCNA_03445	0.11	-0.9
3,608,979	-		CCNA_03445	0.11	-1.1
3,608,983	+		CCNA_03445	0.11	-0.2
3,608,992	+		CCNA_03445	0.12	-0.3
3,608,992	+		CCNA_03445	0.12	-0.2
3,608,992	+		CCNA_03445	0.12	-0.4
3,609,093	+		CCNA_03445	0.16	-0.6
3,609,141	+		CCNA_03445	0.18	+0.9
3,609,141	+		CCNA_03445	0.18	+0.3
3,609,168	-		CCNA_03445	0.19	-0.9
3,609,273	+		CCNA_03445	0.23	+1.2
3,609,273	+		CCNA_03445	0.23	-0.3
3,609,281	-		CCNA_03445	0.24	-0.2
3,609,293	-		CCNA_03445	0.24	-1.3
3,609,305	+		CCNA_03445	0.25	+0.5
3,609,305	+		CCNA_03445	0.25	-0.7
3,609,329	+		CCNA_03445	0.26	-0.3
3,609,329	+		CCNA_03445	0.26	+1.3
3,609,329	+		CCNA_03445	0.26	+0.1
3,609,337	-		CCNA_03445	0.26	-2.7
3,609,337	-		CCNA_03445	0.26	-0.7
3,609,337	-		CCNA_03445	0.26	+0.1
3,609,337	-		CCNA_03445	0.26	-0.4
3,609,409	+		CCNA_03445	0.29	+0.9
3,609,416	-		CCNA_03445	0.29	-0.1
3,609,416	-		CCNA_03445	0.29	+0.2
3,609,452	-		CCNA_03445	0.31	+0.2
3,609,493	+		CCNA_03445	0.33	+0.3
3,609,517	-		CCNA_03445	0.34	-0.1
3,609,522	+		CCNA_03445	0.34	-1.7
3,609,530	-		CCNA_03445	0.34	-0.2
3,609,535	-		CCNA_03445	0.34	+0.0
3,609,563	+		CCNA_03445	0.35	-0.2
3,609,571	-		CCNA_03445	0.36	-0.0
3,609,571	-		CCNA_03445	0.36	-1.0
3,609,618	-		CCNA_03445	0.38	+0.2
3,609,618	-		CCNA_03445	0.38	-1.0
3,609,618	-		CCNA_03445	0.38	+0.6
3,609,654	-		CCNA_03445	0.39	-2.1
3,609,663	-		CCNA_03445	0.40	-1.4
3,609,728	-		CCNA_03445	0.42	-1.4
3,609,733	-		CCNA_03445	0.42	-0.8
3,609,806	+		CCNA_03445	0.45	+0.3
3,609,814	-		CCNA_03445	0.46	-0.3
3,609,844	-		CCNA_03445	0.47	+0.2
3,609,870	+		CCNA_03445	0.48	-0.1
3,609,932	-		CCNA_03445	0.51	-0.8
3,609,964	+		CCNA_03445	0.52	-0.0
3,609,976	-		CCNA_03445	0.53	+0.1
3,609,986	+		CCNA_03445	0.53	-0.0
3,610,050	-		CCNA_03445	0.56	-0.8
3,610,057	+		CCNA_03445	0.56	+0.7
3,610,063	+		CCNA_03445	0.56	-0.4
3,610,063	+		CCNA_03445	0.56	+0.2
3,610,065	-		CCNA_03445	0.56	+0.0
3,610,065	-		CCNA_03445	0.56	+0.5
3,610,071	-		CCNA_03445	0.56	-0.5
3,610,091	-		CCNA_03445	0.57	+0.2
3,610,181	-		CCNA_03445	0.61	-0.3
3,610,242	+		CCNA_03445	0.64	+0.4
3,610,285	+		CCNA_03445	0.65	-0.3
3,610,285	+		CCNA_03445	0.65	-0.4
3,610,285	+		CCNA_03445	0.65	+1.1
3,610,290	+		CCNA_03445	0.66	-0.0
3,610,290	+		CCNA_03445	0.66	-2.5
3,610,292	-		CCNA_03445	0.66	-0.9
3,610,293	-		CCNA_03445	0.66	+0.6
3,610,298	-		CCNA_03445	0.66	-0.7
3,610,298	-		CCNA_03445	0.66	+0.0
3,610,298	-		CCNA_03445	0.66	+0.9
3,610,298	-		CCNA_03445	0.66	+0.3
3,610,311	+		CCNA_03445	0.66	+0.1
3,610,330	-		CCNA_03445	0.67	-0.5
3,610,383	-		CCNA_03445	0.69	+0.5
3,610,460	+		CCNA_03445	0.73	-0.2
3,610,491	+		CCNA_03445	0.74	+0.2
3,610,496	+		CCNA_03445	0.74	-0.0
3,610,504	-		CCNA_03445	0.74	+0.3
3,610,529	+		CCNA_03445	0.75	-0.1
3,610,537	-		CCNA_03445	0.76	-0.3
3,610,552	-		CCNA_03445	0.76	+0.4
3,610,565	+		CCNA_03445	0.77	-0.2
3,610,581	+		CCNA_03445	0.78	+0.1
3,610,598	+		CCNA_03445	0.78	-0.4
3,610,606	-		CCNA_03445	0.79	+0.2
3,610,614	+		CCNA_03445	0.79	-0.7
3,610,647	+		CCNA_03445	0.80	+0.2
3,610,647	+		CCNA_03445	0.80	+0.3
3,610,655	-		CCNA_03445	0.81	-0.6
3,610,655	-		CCNA_03445	0.81	-0.5
3,610,733	+		CCNA_03445	0.84	-0.1
3,610,735	-		CCNA_03445	0.84	-0.7
3,610,750	+		CCNA_03445	0.85	-0.3
3,610,750	+		CCNA_03445	0.85	-0.4
3,610,750	+		CCNA_03445	0.85	+2.0
3,610,750	+		CCNA_03445	0.85	-0.2
3,610,758	-		CCNA_03445	0.85	+0.2
3,610,758	-		CCNA_03445	0.85	-0.1
3,610,763	-		CCNA_03445	0.85	+0.1
3,610,846	+		CCNA_03445	0.89	+0.6
3,610,914	-				+1.1
3,610,917	+				+0.0
3,610,948	+				+0.4
3,610,975	+				+0.0
3,610,975	+				+0.9
3,610,985	+				-0.5
3,610,985	+				-0.8
3,610,985	+				-1.6
3,610,993	-				-0.1
3,611,028	-				+0.1
3,611,038	-				-0.3
3,611,045	+				+0.1
3,611,045	+				+0.5
3,611,045	+				+0.6
3,611,068	+				+0.5
3,611,099	+				+0.1
3,611,112	+				+1.9
3,611,114	+				-0.1
3,611,114	+				+0.6
3,611,117	-				-0.5
3,611,122	-				+0.0
3,611,122	-				-0.1
3,611,122	-				+0.3
3,611,133	-				-0.3
3,611,143	-				+0.3
3,611,170	-				-0.3
3,611,191	+				-0.5
3,611,206	+				+0.6
3,611,211	+				-0.4
3,611,211	+				-0.4
3,611,216	+				-0.3
3,611,219	-				-0.4
3,611,221	+				-1.6
3,611,223	-				+0.0
3,611,224	-				-0.1
3,611,224	-				+0.8
3,611,224	-				-0.4
3,611,333	+		CCNA_03446	0.11	+0.7
3,611,340	-		CCNA_03446	0.11	-0.0
3,611,394	-		CCNA_03446	0.14	-1.2
3,611,414	+		CCNA_03446	0.15	-0.5
3,611,414	+		CCNA_03446	0.15	+1.7
3,611,419	+		CCNA_03446	0.16	+0.9
3,611,431	+		CCNA_03446	0.16	+0.0
3,611,431	+		CCNA_03446	0.16	-1.9
3,611,438	+		CCNA_03446	0.17	-0.2
3,611,439	-		CCNA_03446	0.17	-0.9
3,611,439	-		CCNA_03446	0.17	+0.9
3,611,439	-		CCNA_03446	0.17	-1.2
3,611,445	-		CCNA_03446	0.17	-0.6
3,611,446	-		CCNA_03446	0.17	-1.1
3,611,446	-		CCNA_03446	0.17	-1.1
3,611,511	+		CCNA_03446	0.21	-0.0
3,611,511	+		CCNA_03446	0.21	+0.3
3,611,511	+		CCNA_03446	0.21	+0.3
3,611,523	+		CCNA_03446	0.21	+0.2
3,611,523	+		CCNA_03446	0.21	+0.4
3,611,524	-		CCNA_03446	0.21	+1.0
3,611,529	-		CCNA_03446	0.21	-0.3
3,611,531	-		CCNA_03446	0.22	+2.1
3,611,548	+		CCNA_03446	0.23	-0.6
3,611,625	+		CCNA_03446	0.27	+0.1
3,611,625	+		CCNA_03446	0.27	+0.9
3,611,625	+		CCNA_03446	0.27	-0.1
3,611,625	+		CCNA_03446	0.27	-0.0
3,611,633	-		CCNA_03446	0.27	-1.7
3,611,633	-		CCNA_03446	0.27	+0.6
3,611,633	-		CCNA_03446	0.27	+0.6
3,611,633	-		CCNA_03446	0.27	-0.4
3,611,652	-		CCNA_03446	0.28	+0.2
3,611,694	+		CCNA_03446	0.30	+0.2
3,611,696	+		CCNA_03446	0.30	-0.6
3,611,749	-		CCNA_03446	0.33	-0.1
3,611,802	+		CCNA_03446	0.36	-0.0
3,611,818	-		CCNA_03446	0.37	+0.1
3,611,862	+		CCNA_03446	0.39	+1.1
3,611,887	-		CCNA_03446	0.41	-0.4
3,611,891	-		CCNA_03446	0.41	-1.4
3,611,891	-		CCNA_03446	0.41	-0.6
3,611,906	+		CCNA_03446	0.42	+0.6
3,611,911	+		CCNA_03446	0.42	-1.2
3,611,911	+		CCNA_03446	0.42	-0.1
3,611,919	-		CCNA_03446	0.42	+0.0
3,611,919	-		CCNA_03446	0.42	-0.3
3,611,926	+		CCNA_03446	0.43	+1.1
3,611,926	+		CCNA_03446	0.43	-0.9
3,611,931	+		CCNA_03446	0.43	-0.2
3,611,965	+		CCNA_03446	0.45	+0.5
3,611,965	+		CCNA_03446	0.45	+0.1
3,611,975	+		CCNA_03446	0.45	+0.1
3,611,983	-		CCNA_03446	0.46	+0.8
3,611,990	+		CCNA_03446	0.46	+0.2
3,612,031	-		CCNA_03446	0.48	-0.1
3,612,055	-		CCNA_03446	0.50	-1.5
3,612,089	+		CCNA_03446	0.52	-0.7
3,612,089	+		CCNA_03446	0.52	+0.5
3,612,101	+		CCNA_03446	0.52	+0.6
3,612,106	+		CCNA_03446	0.52	-0.1