Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03439

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,602,273	+				+0.1
3,602,288	+				-0.3
3,602,288	+				+0.0
3,602,297	+				-0.2
3,602,307	+				+1.1
3,602,314	+				+0.7
3,602,315	-				-0.5
3,602,379	-		CCNA_03437	0.18	+0.3
3,602,414	+		CCNA_03437	0.25	+1.1
3,602,414	+		CCNA_03437	0.25	-0.9
3,602,414	+		CCNA_03437	0.25	+0.6
3,602,422	-		CCNA_03437	0.27	+0.2
3,602,422	-		CCNA_03437	0.27	+0.1
3,602,422	-		CCNA_03437	0.27	-0.2
3,602,479	-		CCNA_03437	0.38	-0.3
3,602,488	-		CCNA_03437	0.40	-0.8
3,602,495	+		CCNA_03437	0.41	-0.1
3,602,503	-		CCNA_03437	0.43	-0.6
3,602,503	-		CCNA_03437	0.43	-0.2
3,602,525	-		CCNA_03437	0.47	-0.3
3,602,529	+		CCNA_03437	0.48	-0.3
3,602,556	-		CCNA_03437	0.54	-0.0
3,602,616	+		CCNA_03437	0.66	+0.5
3,602,616	+		CCNA_03437	0.66	-0.2
3,602,616	+		CCNA_03437	0.66	-1.2
3,602,624	-		CCNA_03437	0.67	-0.0
3,602,624	-		CCNA_03437	0.67	-1.1
3,602,624	-		CCNA_03437	0.67	+0.6
3,602,631	+		CCNA_03437	0.69	-1.0
3,602,631	+		CCNA_03437	0.69	+1.0
3,602,637	+		CCNA_03437	0.70	-0.9
3,602,637	+		CCNA_03437	0.70	+0.8
3,602,639	-		CCNA_03437	0.70	-0.5
3,602,639	-		CCNA_03437	0.70	-0.2
3,602,641	-		CCNA_03437	0.71	+1.2
3,602,642	+		CCNA_03437	0.71	+0.3
3,602,645	-		CCNA_03437	0.71	+0.2
3,602,645	-		CCNA_03437	0.71	+0.5
3,602,664	+		CCNA_03437	0.75	-0.8
3,602,672	-		CCNA_03437	0.77	+1.1
3,602,711	+		CCNA_03437	0.85	+0.3
3,602,759	+				-0.4
3,602,759	+				+0.5
3,602,767	-				+0.7
3,602,840	+				-0.6
3,602,856	-				-0.4
3,602,870	-		CCNA_03438	0.11	-0.7
3,602,872	-		CCNA_03438	0.12	+0.2
3,602,879	+		CCNA_03438	0.14	+0.1
3,602,892	+		CCNA_03438	0.18	-0.8
3,602,892	+		CCNA_03438	0.18	-1.6
3,602,894	-		CCNA_03438	0.18	-0.8
3,602,911	-		CCNA_03438	0.24	+0.1
3,602,947	+		CCNA_03438	0.35	+0.6
3,602,989	+		CCNA_03438	0.47	-0.0
3,603,016	-		CCNA_03438	0.55	+0.4
3,603,023	-		CCNA_03438	0.58	-2.0
3,603,124	-		CCNA_03438	0.88	-2.6
3,603,130	-				+0.8
3,603,130	-				+1.0
3,603,132	+				-1.2
3,603,148	+				+0.0
3,603,178	+				-0.4
3,603,186	-				-0.0
3,603,218	-				+0.5
3,603,224	+				-0.9
3,603,224	+				-0.1
3,603,275	-				+0.0
3,603,315	+		CCNA_03439	0.40	+1.3
3,603,315	+		CCNA_03439	0.40	+0.0
3,603,323	-		CCNA_03439	0.47	+0.4
3,603,363	-		CCNA_03439	0.79	+0.8
3,603,408	+				-1.0
3,603,413	+				-0.3
3,603,416	-				+0.0
3,603,421	-				+0.6
3,603,421	-				+0.4
3,603,421	-				-0.7
3,603,423	-				-1.7
3,603,425	+				+0.1
3,603,433	-				+0.2
3,603,435	-				-1.2
3,603,449	-				+0.8
3,603,490	-				+1.0
3,603,507	-				-1.6
3,603,536	+				+0.7
3,603,604	-		CCNA_03440	0.11	+0.5
3,603,628	-		CCNA_03440	0.13	+0.6
3,603,638	-		CCNA_03440	0.14	-1.9
3,603,643	-		CCNA_03440	0.15	+1.1
3,603,652	+		CCNA_03440	0.16	-0.4
3,603,736	-		CCNA_03440	0.24	-1.6
3,603,793	+		CCNA_03440	0.30	-0.9
3,603,827	-		CCNA_03440	0.33	+0.1
3,603,859	+		CCNA_03440	0.37	+0.2
3,603,862	-		CCNA_03440	0.37	-0.4
3,603,862	-		CCNA_03440	0.37	-1.1
3,603,862	-		CCNA_03440	0.37	-0.0
3,603,862	-		CCNA_03440	0.37	+0.1
3,603,872	-		CCNA_03440	0.38	-0.9
3,603,883	-		CCNA_03440	0.39	-1.1
3,603,922	+		CCNA_03440	0.43	-1.0
3,603,925	-		CCNA_03440	0.43	-0.2
3,603,930	-		CCNA_03440	0.44	+0.0
3,603,955	+		CCNA_03440	0.46	-2.1
3,603,955	+		CCNA_03440	0.46	-2.1
3,603,955	+		CCNA_03440	0.46	+0.6
3,603,955	+		CCNA_03440	0.46	-0.4
3,603,955	+		CCNA_03440	0.46	+0.0
3,604,030	-		CCNA_03440	0.54	+0.0
3,604,034	+		CCNA_03440	0.54	-1.1
3,604,042	-		CCNA_03440	0.55	-0.6
3,604,042	-		CCNA_03440	0.55	-0.3
3,604,055	-		CCNA_03440	0.56	-0.8
3,604,062	+		CCNA_03440	0.57	-0.4
3,604,065	-		CCNA_03440	0.57	+1.0
3,604,225	+		CCNA_03440	0.73	+0.2
3,604,243	+		CCNA_03440	0.75	+0.3
3,604,243	+		CCNA_03440	0.75	-0.2
3,604,251	-		CCNA_03440	0.76	-1.3
3,604,251	-		CCNA_03440	0.76	-2.3
3,604,268	-		CCNA_03440	0.78	+0.6
3,604,278	+		CCNA_03440	0.79	+0.4
3,604,278	+		CCNA_03440	0.79	+0.0
3,604,319	+		CCNA_03440	0.83	+0.1
3,604,340	+		CCNA_03440	0.85	-0.1
3,604,348	-		CCNA_03440	0.86	-0.3
3,604,369	+		CCNA_03440	0.88	-0.4
3,604,371	+		CCNA_03440	0.88	+0.3
3,604,371	+		CCNA_03440	0.88	-0.7
3,604,379	-		CCNA_03440	0.89	+1.1
3,604,379	-		CCNA_03440	0.89	+0.8
3,604,379	-		CCNA_03440	0.89	-1.3