Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03370

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,545,213	+		CCNA_03368	0.43	+0.5
3,545,214	+		CCNA_03368	0.43	+0.5
3,545,242	+		CCNA_03368	0.50	+0.2
3,545,242	+		CCNA_03368	0.50	-0.4
3,545,265	-		CCNA_03368	0.55	+0.6
3,545,303	+		CCNA_03368	0.64	+1.4
3,545,303	+		CCNA_03368	0.64	-0.8
3,545,334	-		CCNA_03368	0.71	+0.7
3,545,342	-		CCNA_03368	0.73	+0.4
3,545,373	-		CCNA_03368	0.80	+0.1
3,545,391	+		CCNA_03368	0.85	-0.5
3,545,400	+		CCNA_03368	0.87	-0.2
3,545,402	+		CCNA_03368	0.87	-0.5
3,545,408	-		CCNA_03368	0.89	+0.2
3,545,445	+				-0.5
3,545,445	+				+0.0
3,545,450	+				-0.9
3,545,468	-				+0.3
3,545,468	-				+0.3
3,545,468	-				+0.5
3,545,470	+				-0.8
3,545,470	+				+0.3
3,545,470	+				-0.3
3,545,475	+				-2.0
3,545,478	-				+1.1
3,545,478	-				-0.0
3,545,478	-				+1.1
3,545,478	-				+0.3
3,545,478	-				+0.3
3,545,478	-				+0.0
3,545,478	-				+0.7
3,545,478	-				-0.4
3,545,478	-				-0.1
3,545,478	-				+0.6
3,545,485	+				+0.1
3,545,490	+				-1.9
3,545,490	+				-0.5
3,545,493	-				+1.8
3,545,550	-		CCNA_03369	0.14	+0.6
3,545,555	-		CCNA_03369	0.15	-1.2
3,545,555	-		CCNA_03369	0.15	+0.2
3,545,556	-		CCNA_03369	0.15	+0.7
3,545,572	-		CCNA_03369	0.18	+0.7
3,545,672	+		CCNA_03369	0.36	+0.3
3,545,675	+		CCNA_03369	0.36	+1.0
3,545,685	+		CCNA_03369	0.38	+0.4
3,545,692	+		CCNA_03369	0.39	+0.3
3,545,713	+		CCNA_03369	0.43	+0.6
3,545,719	+		CCNA_03369	0.44	-0.6
3,545,755	+		CCNA_03369	0.50	-1.1
3,545,760	+		CCNA_03369	0.51	-1.1
3,545,763	-		CCNA_03369	0.51	-0.1
3,545,768	+		CCNA_03369	0.52	+2.5
3,545,768	+		CCNA_03369	0.52	-0.6
3,545,768	-		CCNA_03369	0.52	-0.1
3,545,769	-		CCNA_03369	0.52	+0.0
3,545,820	+		CCNA_03369	0.61	+0.3
3,545,820	+		CCNA_03369	0.61	-0.3
3,545,860	-		CCNA_03369	0.68	+0.2
3,545,860	-		CCNA_03369	0.68	+0.3
3,545,923	+		CCNA_03369	0.79	-0.2
3,545,923	+		CCNA_03369	0.79	-0.3
3,545,923	+		CCNA_03369	0.79	+0.2
3,545,923	+		CCNA_03369	0.79	+0.8
3,545,923	+		CCNA_03369	0.79	-0.1
3,545,923	+		CCNA_03369	0.79	+1.1
3,545,923	+		CCNA_03369	0.79	-0.4
3,545,931	-		CCNA_03369	0.81	+0.9
3,545,931	-		CCNA_03369	0.81	+0.3
3,545,931	-		CCNA_03369	0.81	+0.7
3,545,931	-		CCNA_03369	0.81	-0.6
3,546,066	+				+0.2
3,546,074	-				-0.0
3,546,076	+				+0.4
3,546,084	-				+1.0
3,546,084	-				+0.4
3,546,091	+				+0.8
3,546,093	-				+0.5
3,546,100	-				+0.3
3,546,102	+				-0.4
3,546,112	+				-0.1
3,546,112	+				-0.3
3,546,119	-				-0.2
3,546,120	-				+0.4
3,546,144	+				-1.0
3,546,159	-				-0.8
3,546,169	+				-0.6
3,546,169	+				+0.7
3,546,172	-				-0.9
3,546,190	-				-1.0
3,546,296	+		CCNA_03370	0.17	-0.5
3,546,320	+		CCNA_03370	0.22	+0.2
3,546,327	+		CCNA_03370	0.23	+0.2
3,546,430	-		CCNA_03370	0.43	-0.2
3,546,432	+		CCNA_03370	0.43	-0.8
3,546,432	+		CCNA_03370	0.43	+0.2
3,546,448	+		CCNA_03370	0.46	-0.0
3,546,466	-		CCNA_03370	0.50	+0.3
3,546,501	+		CCNA_03370	0.56	+0.5
3,546,501	+		CCNA_03370	0.56	+1.3
3,546,501	+		CCNA_03370	0.56	-0.4
3,546,509	-		CCNA_03370	0.58	+0.6
3,546,509	-		CCNA_03370	0.58	-0.1
3,546,509	-		CCNA_03370	0.58	-0.2
3,546,509	-		CCNA_03370	0.58	+0.0
3,546,509	-		CCNA_03370	0.58	+1.1
3,546,509	-		CCNA_03370	0.58	+1.8
3,546,514	-		CCNA_03370	0.59	+0.1
3,546,514	-		CCNA_03370	0.59	+1.2
3,546,543	-		CCNA_03370	0.64	+0.5
3,546,621	-		CCNA_03370	0.79	+0.4
3,546,632	+		CCNA_03370	0.81	+1.8
3,546,636	-		CCNA_03370	0.82	+0.2
3,546,664	-		CCNA_03370	0.88	+1.0
3,546,675	+		CCNA_03370	0.90	-0.1
3,546,731	-				+0.2
3,546,758	+				-0.2
3,546,772	-				+0.1
3,546,777	+		CCNA_03371	0.11	+0.2
3,546,809	+		CCNA_03371	0.17	-1.7
3,546,809	+		CCNA_03371	0.17	-0.3
3,546,825	+		CCNA_03371	0.21	-2.8
3,546,876	+		CCNA_03371	0.31	+0.6
3,546,894	-		CCNA_03371	0.35	+0.1
3,546,894	-		CCNA_03371	0.35	+1.1
3,546,907	-		CCNA_03371	0.38	+0.2
3,546,912	+		CCNA_03371	0.39	-0.3
3,546,912	+		CCNA_03371	0.39	-0.6
3,546,995	-		CCNA_03371	0.56	+0.6
3,547,008	+		CCNA_03371	0.59	-0.9
3,547,016	-		CCNA_03371	0.61	-0.1
3,547,031	-		CCNA_03371	0.64	+0.5
3,547,072	+		CCNA_03371	0.72	-1.4
3,547,107	+		CCNA_03371	0.80	-1.3
3,547,167	+				-0.3
3,547,167	+				-0.5
3,547,167	+				-1.9
3,547,167	+				-0.4
3,547,175	-				+0.3
3,547,195	-				+0.0
3,547,201	+				-0.5
3,547,272	+				-1.6
3,547,380	-		CCNA_03372	0.12	+0.7
3,547,620	+				+0.0
3,547,626	-				-0.3
3,547,648	-				-0.5