Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03229

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,393,363	+		CCNA_03228	0.55	+1.4
3,393,413	+		CCNA_03228	0.57	+0.7
3,393,418	+		CCNA_03228	0.57	-0.4
3,393,426	-		CCNA_03228	0.58	+0.4
3,393,430	+		CCNA_03228	0.58	-0.1
3,393,431	-		CCNA_03228	0.58	-0.5
3,393,617	-		CCNA_03228	0.67	+0.2
3,393,653	-		CCNA_03228	0.69	-0.3
3,393,656	+		CCNA_03228	0.69	+0.9
3,393,659	-		CCNA_03228	0.69	+0.2
3,393,659	-		CCNA_03228	0.69	-0.1
3,393,699	+		CCNA_03228	0.71	-2.4
3,393,699	+		CCNA_03228	0.71	-1.0
3,393,699	+		CCNA_03228	0.71	-0.2
3,393,715	+		CCNA_03228	0.72	-0.9
3,393,757	+		CCNA_03228	0.74	-0.3
3,393,806	+		CCNA_03228	0.77	-1.5
3,393,833	+		CCNA_03228	0.78	-0.1
3,393,834	-		CCNA_03228	0.78	+0.8
3,393,893	-		CCNA_03228	0.81	-0.0
3,393,905	+		CCNA_03228	0.82	+0.7
3,393,914	-		CCNA_03228	0.82	-0.1
3,393,934	+		CCNA_03228	0.83	-0.9
3,393,966	-		CCNA_03228	0.85	-0.5
3,394,035	+		CCNA_03228	0.88	+0.1
3,394,105	+				-0.6
3,394,113	-				-0.3
3,394,135	-				-0.3
3,394,159	+				-0.4
3,394,159	+				+2.0
3,394,159	+				-1.1
3,394,161	+				-1.5
3,394,167	-				-0.0
3,394,212	-				-0.1
3,394,235	-				+0.7
3,394,278	+				-0.3
3,394,280	+				-0.8
3,394,280	+				-0.4
3,394,280	+				-1.5
3,394,280	+				+0.6
3,394,280	+				+0.2
3,394,280	+				+0.1
3,394,280	+				+0.1
3,394,281	-				-0.1
3,394,288	-				-1.2
3,394,293	+				-1.5
3,394,301	-				-0.5
3,394,307	-				-0.1
3,394,307	-				+0.5
3,394,307	-				+0.3
3,394,309	+				-1.5
3,394,409	+				-0.7
3,394,437	-				+1.2
3,394,462	-				+0.1
3,394,462	-				-0.9
3,394,464	+				+0.3
3,394,478	+				+0.8
3,394,478	+				-0.8
3,394,499	+		CCNA_03229	0.11	+1.0
3,394,534	+		CCNA_03229	0.13	+0.2
3,394,534	+		CCNA_03229	0.13	+0.9
3,394,534	+		CCNA_03229	0.13	+0.4
3,394,539	+		CCNA_03229	0.14	-0.3
3,394,542	-		CCNA_03229	0.14	-0.1
3,394,542	-		CCNA_03229	0.14	+1.0
3,394,542	-		CCNA_03229	0.14	+0.5
3,394,547	-		CCNA_03229	0.14	-0.5
3,394,560	+		CCNA_03229	0.16	+0.5
3,394,593	+		CCNA_03229	0.18	-0.4
3,394,593	+		CCNA_03229	0.18	+1.6
3,394,593	+		CCNA_03229	0.18	+0.7
3,394,600	+		CCNA_03229	0.19	+1.3
3,394,600	+		CCNA_03229	0.19	+1.5
3,394,601	-		CCNA_03229	0.19	+1.3
3,394,607	-		CCNA_03229	0.19	+0.4
3,394,608	-		CCNA_03229	0.19	-0.3
3,394,625	+		CCNA_03229	0.21	-0.4
3,394,638	-		CCNA_03229	0.22	-0.1
3,394,656	+		CCNA_03229	0.23	-1.1
3,394,753	+		CCNA_03229	0.30	-0.4
3,394,764	-		CCNA_03229	0.31	+1.1
3,394,785	-		CCNA_03229	0.33	-1.7
3,394,846	-		CCNA_03229	0.38	-0.0
3,394,888	+		CCNA_03229	0.41	+0.1
3,394,918	-		CCNA_03229	0.43	+0.9
3,394,923	-		CCNA_03229	0.44	-0.8
3,394,928	-		CCNA_03229	0.44	-0.6
3,395,048	-		CCNA_03229	0.53	+1.7
3,395,050	+		CCNA_03229	0.53	-0.2
3,395,058	-		CCNA_03229	0.54	-3.1
3,395,065	+		CCNA_03229	0.55	-0.1
3,395,066	+		CCNA_03229	0.55	-1.6
3,395,066	+		CCNA_03229	0.55	+0.9
3,395,101	+		CCNA_03229	0.57	+0.4
3,395,138	-		CCNA_03229	0.60	+0.4
3,395,165	-		CCNA_03229	0.62	-0.9
3,395,172	+		CCNA_03229	0.63	-0.2
3,395,180	-		CCNA_03229	0.64	-0.4
3,395,181	+		CCNA_03229	0.64	-0.4
3,395,181	+		CCNA_03229	0.64	+1.6
3,395,189	-		CCNA_03229	0.64	-0.3
3,395,189	-		CCNA_03229	0.64	-0.3
3,395,189	-		CCNA_03229	0.64	+0.1
3,395,208	+		CCNA_03229	0.66	-2.3
3,395,260	+		CCNA_03229	0.70	-0.2
3,395,343	+		CCNA_03229	0.76	+0.5
3,395,395	+		CCNA_03229	0.80	+0.4
3,395,405	+		CCNA_03229	0.81	-0.9
3,395,405	+		CCNA_03229	0.81	+0.3
3,395,413	-		CCNA_03229	0.82	-0.6
3,395,413	-		CCNA_03229	0.82	-0.1
3,395,413	-		CCNA_03229	0.82	-1.3
3,395,485	+		CCNA_03229	0.87	+1.1
3,395,495	+		CCNA_03229	0.88	-0.8
3,395,502	+		CCNA_03229	0.89	-0.1
3,395,506	+		CCNA_03229	0.89	-0.8
3,395,506	+		CCNA_03229	0.89	+0.4
3,395,567	+				-0.1
3,395,608	+				+0.5
3,395,608	+				+0.0
3,395,616	-				+0.1
3,395,621	+				-0.6
3,395,621	+				-0.6
3,395,621	+				+0.5
3,395,621	+				+0.0
3,395,621	+				-0.1
3,395,628	+				-0.1
3,395,629	-				-0.6
3,395,629	-				+0.4
3,395,629	-				-0.2
3,395,640	+				-0.2
3,395,644	+				-0.6
3,395,652	+				-1.3
3,395,652	+				-2.2
3,395,653	-				+0.3
3,395,653	-				+0.3
3,395,660	-				+0.5
3,395,686	+				-0.8
3,395,691	+				-0.9
3,395,701	-				+0.9
3,395,722	+				-1.6
3,395,762	-				+0.9
3,395,772	+				-0.8
3,395,796	+				-1.5
3,395,806	+				-2.2
3,395,806	+				-0.6
3,395,806	+				+0.9
3,395,806	+				-0.6
3,395,806	+				-1.1
3,395,806	+				+0.8
3,395,806	+				+2.0
3,395,806	+				+0.9
3,395,806	+				-0.5
3,395,806	+				+0.9
3,395,806	+				-1.1
3,395,806	+				-0.8
3,395,806	+				-1.8
3,395,806	+				-0.8
3,395,806	+				-3.2
3,395,806	+				+1.6
3,395,806	+				+0.4
3,395,806	+				-1.2
3,395,806	+				-0.3
3,395,814	-				+1.2
3,395,814	-				-0.2
3,395,814	-				+1.3
3,395,814	-				+0.6
3,395,814	-				-0.1
3,395,814	-				+1.4
3,395,814	-				+0.0
3,395,814	-				+0.0
3,395,814	-				+0.3
3,395,814	-				-1.1
3,395,814	-				+0.2
3,395,814	-				+0.9
3,395,814	-				+0.7
3,395,814	-				-0.3
3,395,814	-				+0.5
3,395,814	-				-0.8
3,395,814	-				-0.1
3,395,837	-				-0.1
3,395,864	+				-2.3
3,395,957	-		CCNA_03230	0.17	+0.0
3,396,105	-		CCNA_03230	0.27	+0.6
3,396,241	+		CCNA_03230	0.37	-0.4
3,396,241	+		CCNA_03230	0.37	-0.1
3,396,241	+		CCNA_03230	0.37	-0.0
3,396,249	-		CCNA_03230	0.37	-0.3
3,396,256	-		CCNA_03230	0.38	-0.7
3,396,271	-		CCNA_03230	0.39	+0.4
3,396,310	-		CCNA_03230	0.42	-0.1
3,396,344	+		CCNA_03230	0.44	-0.8
3,396,366	-		CCNA_03230	0.46	-1.3
3,396,385	-		CCNA_03230	0.47	-1.0
3,396,440	+		CCNA_03230	0.51	-0.3
3,396,443	-		CCNA_03230	0.51	+0.1
3,396,511	-		CCNA_03230	0.56	-1.3
3,396,526	-		CCNA_03230	0.57	-0.3
3,396,562	+		CCNA_03230	0.60	-1.3
3,396,575	+		CCNA_03230	0.61	-0.7
3,396,575	+		CCNA_03230	0.61	-0.1
3,396,583	-		CCNA_03230	0.61	+1.5
3,396,583	-		CCNA_03230	0.61	-2.1
3,396,583	-		CCNA_03230	0.61	+1.5
3,396,585	+		CCNA_03230	0.62	+0.5
3,396,593	-		CCNA_03230	0.62	-1.1
3,396,619	+		CCNA_03230	0.64	-2.6
3,396,627	-		CCNA_03230	0.65	-1.1