Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03178

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,336,742	-		CCNA_03177	0.64	+0.3
3,336,742	-		CCNA_03177	0.64	-0.4
3,336,758	+		CCNA_03177	0.65	-0.9
3,336,758	+		CCNA_03177	0.65	-1.9
3,336,758	+		CCNA_03177	0.65	-0.0
3,336,766	-		CCNA_03177	0.65	+0.1
3,336,781	+		CCNA_03177	0.66	-0.1
3,336,811	-		CCNA_03177	0.67	-0.2
3,336,854	-		CCNA_03177	0.69	-0.0
3,336,874	-		CCNA_03177	0.70	-0.2
3,336,876	-		CCNA_03177	0.71	+0.6
3,336,909	-		CCNA_03177	0.72	+0.0
3,336,914	-		CCNA_03177	0.72	-0.4
3,336,964	-		CCNA_03177	0.75	-0.3
3,337,039	+		CCNA_03177	0.79	-0.9
3,337,039	+		CCNA_03177	0.79	-2.2
3,337,039	+		CCNA_03177	0.79	+0.1
3,337,047	-		CCNA_03177	0.79	-2.2
3,337,064	+		CCNA_03177	0.80	-0.9
3,337,086	-		CCNA_03177	0.81	+1.0
3,337,091	-		CCNA_03177	0.81	-0.5
3,337,120	-		CCNA_03177	0.83	-0.0
3,337,131	+		CCNA_03177	0.83	+0.6
3,337,167	+		CCNA_03177	0.85	-1.8
3,337,184	+		CCNA_03177	0.86	-1.2
3,337,184	-		CCNA_03177	0.86	-0.7
3,337,302	+				+0.3
3,337,317	+				+0.6
3,337,339	+				-1.4
3,337,355	+				+1.0
3,337,364	+				-0.8
3,337,369	-				-2.1
3,337,433	+				-0.6
3,337,449	+				-1.9
3,337,478	-				+2.1
3,337,548	+				-0.0
3,337,572	+				+1.0
3,337,590	-				-0.8
3,337,600	+				+0.9
3,337,612	+				-1.4
3,337,625	-				+1.0
3,337,640	-				-2.3
3,337,707	+				-0.6
3,337,715	-				+0.1
3,337,721	+				-1.6
3,337,729	-				+0.3
3,337,729	-				+0.1
3,337,734	-				+1.1
3,337,744	-				-0.8
3,337,752	-		CCNA_03178	0.12	+0.9
3,337,757	+		CCNA_03178	0.13	+3.5
3,337,765	-		CCNA_03178	0.15	+0.8
3,337,804	+		CCNA_03178	0.26	-0.1
3,337,804	+		CCNA_03178	0.26	-1.2
3,337,857	+		CCNA_03178	0.41	+0.1
3,337,911	-		CCNA_03178	0.56	+1.1
3,337,911	-		CCNA_03178	0.56	+0.5
3,337,911	-		CCNA_03178	0.56	+0.7
3,337,923	+		CCNA_03178	0.60	-3.2
3,337,931	-		CCNA_03178	0.62	-0.3
3,337,949	-		CCNA_03178	0.67	+0.3
3,337,995	+		CCNA_03178	0.80	+0.7
3,338,003	-		CCNA_03178	0.82	+0.0
3,338,003	-		CCNA_03178	0.82	+0.3
3,338,008	-		CCNA_03178	0.83	+0.4
3,338,040	+				-1.6
3,338,073	+				+0.1
3,338,081	-				-0.9
3,338,081	-				+1.0
3,338,119	+				-1.1
3,338,136	-				+0.2
3,338,140	+				+1.0
3,338,185	+				+2.6
3,338,185	+				+0.5
3,338,186	+				-0.3
3,338,186	+				+0.6
3,338,188	-				-0.2
3,338,191	+				-2.0
3,338,193	-				+1.4
3,338,193	-				+0.2
3,338,196	+				+2.0
3,338,255	-				-1.0
3,338,271	+				-1.4
3,338,279	-				+0.5
3,338,279	-				+0.8
3,338,308	+		CCNA_03179	0.12	+0.8
3,338,308	+		CCNA_03179	0.12	+0.5
3,338,316	-		CCNA_03179	0.13	-1.3
3,338,362	+		CCNA_03179	0.16	+0.1
3,338,424	-		CCNA_03179	0.21	-2.2
3,338,485	+		CCNA_03179	0.26	+0.3
3,338,491	+		CCNA_03179	0.27	-1.7
3,338,493	-		CCNA_03179	0.27	+0.3
3,338,493	-		CCNA_03179	0.27	-0.7
3,338,501	+		CCNA_03179	0.27	-0.9
3,338,501	+		CCNA_03179	0.27	-0.8
3,338,527	-		CCNA_03179	0.29	-0.1
3,338,530	+		CCNA_03179	0.30	-0.1
3,338,547	+		CCNA_03179	0.31	+0.1
3,338,589	-		CCNA_03179	0.34	-0.3
3,338,589	-		CCNA_03179	0.34	-0.0
3,338,661	-		CCNA_03179	0.40	-0.1
3,338,663	-		CCNA_03179	0.40	-0.4
3,338,665	+		CCNA_03179	0.40	-0.2
3,338,673	-		CCNA_03179	0.41	-1.7
3,338,673	-		CCNA_03179	0.41	-0.7
3,338,680	+		CCNA_03179	0.41	+0.3
3,338,687	+		CCNA_03179	0.42	+0.5
3,338,707	+		CCNA_03179	0.43	-1.0
3,338,736	+		CCNA_03179	0.46	-0.7
3,338,744	-		CCNA_03179	0.46	+0.9
3,338,760	-		CCNA_03179	0.48	+0.3
3,338,774	+		CCNA_03179	0.49	-0.5
3,338,784	+		CCNA_03179	0.49	+0.5
3,338,784	+		CCNA_03179	0.49	+0.8
3,338,784	+		CCNA_03179	0.49	-0.9
3,338,784	+		CCNA_03179	0.49	-0.1
3,338,784	+		CCNA_03179	0.49	-0.4
3,338,836	-		CCNA_03179	0.54	+1.5
3,338,909	+		CCNA_03179	0.59	+0.5
3,338,914	+		CCNA_03179	0.60	-0.5
3,338,915	+		CCNA_03179	0.60	+0.3
3,338,915	+		CCNA_03179	0.60	-1.3
3,338,915	+		CCNA_03179	0.60	+0.2
3,338,922	-		CCNA_03179	0.60	-0.0
3,338,973	+		CCNA_03179	0.64	+0.2
3,339,000	-		CCNA_03179	0.66	-0.2