Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03139

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,287,572	+		CCNA_03138	0.71	+1.3
3,287,580	-		CCNA_03138	0.71	+0.6
3,287,733	-		CCNA_03138	0.78	+0.9
3,287,822	+		CCNA_03138	0.82	-1.3
3,287,848	-		CCNA_03138	0.83	+0.3
3,287,873	-		CCNA_03138	0.84	-1.0
3,288,040	+				-0.5
3,288,052	+				-1.1
3,288,060	-				-1.0
3,288,082	-				+2.9
3,288,119	+				-1.6
3,288,119	+				-0.9
3,288,119	+				+0.3
3,288,119	+				+2.2
3,288,127	-				+0.6
3,288,127	-				-0.9
3,288,127	-				-1.0
3,288,206	-				+0.7
3,288,212	+				-0.2
3,288,235	-				-1.1
3,288,390	-				+0.0
3,288,392	-				+0.2
3,288,417	+				+0.9
3,288,466	+				+0.5
3,288,486	+				+0.7
3,288,486	+				-0.0
3,288,546	+				-1.6
3,288,554	-				-0.0
3,288,554	-				+0.5
3,288,563	+				-0.3
3,288,566	-				-0.2
3,288,566	-				-0.5
3,288,587	-				-0.1
3,288,590	+				+0.2
3,288,590	+				+0.4
3,288,590	+				+0.5
3,288,590	+				+0.3
3,288,590	+				-0.5
3,288,598	-				+0.4
3,288,633	-				+1.4
3,288,635	+				+0.2
3,288,635	+				-0.9
3,288,643	+				-0.5
3,288,645	+				-0.6
3,288,653	-				+0.4
3,288,689	-		CCNA_03139	0.12	+1.2
3,288,707	-		CCNA_03139	0.13	+0.3
3,288,723	+		CCNA_03139	0.14	-0.1
3,288,778	-		CCNA_03139	0.17	+0.5
3,288,793	-		CCNA_03139	0.17	+0.4
3,288,886	+		CCNA_03139	0.22	-0.7
3,288,908	+		CCNA_03139	0.24	-0.0
3,288,908	+		CCNA_03139	0.24	-1.8
3,288,908	+		CCNA_03139	0.24	-0.9
3,288,916	-		CCNA_03139	0.24	+0.1
3,288,916	-		CCNA_03139	0.24	-0.0
3,288,916	-		CCNA_03139	0.24	-0.3
3,288,916	-		CCNA_03139	0.24	-0.1
3,288,982	+		CCNA_03139	0.28	+0.6
3,288,982	+		CCNA_03139	0.28	-0.3
3,288,990	-		CCNA_03139	0.28	+0.2
3,289,017	-		CCNA_03139	0.30	+0.5
3,289,022	-		CCNA_03139	0.30	+0.5
3,289,024	+		CCNA_03139	0.30	-0.8
3,289,027	-		CCNA_03139	0.30	+0.0
3,289,032	-		CCNA_03139	0.30	+0.7
3,289,053	-		CCNA_03139	0.31	+0.1
3,289,125	+		CCNA_03139	0.35	+0.3
3,289,136	-		CCNA_03139	0.36	+1.6
3,289,154	-		CCNA_03139	0.37	-0.1
3,289,184	+		CCNA_03139	0.39	-0.7
3,289,192	-		CCNA_03139	0.39	+0.1
3,289,192	-		CCNA_03139	0.39	+1.4
3,289,192	-		CCNA_03139	0.39	+0.6
3,289,192	-		CCNA_03139	0.39	+0.4
3,289,192	-		CCNA_03139	0.39	-0.7
3,289,197	+		CCNA_03139	0.39	+0.5
3,289,211	+		CCNA_03139	0.40	-0.5
3,289,278	+		CCNA_03139	0.44	-1.0
3,289,349	+		CCNA_03139	0.47	-0.1
3,289,357	+		CCNA_03139	0.48	-0.5
3,289,375	-		CCNA_03139	0.49	+0.5
3,289,382	+		CCNA_03139	0.49	-1.1
3,289,382	+		CCNA_03139	0.49	+0.9
3,289,390	-		CCNA_03139	0.50	+0.4
3,289,390	-		CCNA_03139	0.50	-0.1
3,289,392	+		CCNA_03139	0.50	+0.3
3,289,460	-		CCNA_03139	0.53	-0.2
3,289,481	+		CCNA_03139	0.55	+1.2
3,289,540	+		CCNA_03139	0.58	+0.9
3,289,581	-		CCNA_03139	0.60	+0.5
3,289,616	-		CCNA_03139	0.62	+0.2
3,289,627	+		CCNA_03139	0.62	-0.7
3,289,662	-		CCNA_03139	0.64	-0.1
3,289,662	-		CCNA_03139	0.64	-0.1
3,289,686	+		CCNA_03139	0.66	-0.9
3,289,694	-		CCNA_03139	0.66	-0.2
3,289,707	-		CCNA_03139	0.67	+0.6
3,289,751	-		CCNA_03139	0.69	+0.7
3,289,775	+		CCNA_03139	0.70	+1.9
3,289,809	-		CCNA_03139	0.72	+0.1
3,289,854	-		CCNA_03139	0.75	+0.1
3,289,859	+		CCNA_03139	0.75	-0.4
3,289,902	+		CCNA_03139	0.77	+0.3
3,289,920	-		CCNA_03139	0.78	-0.2
3,289,975	-		CCNA_03139	0.81	+0.3
3,289,994	+		CCNA_03139	0.82	-1.8
3,289,994	+		CCNA_03139	0.82	-0.3
3,290,007	+		CCNA_03139	0.83	-1.3
3,290,013	-		CCNA_03139	0.83	+0.1
3,290,028	+		CCNA_03139	0.84	+1.2
3,290,036	-		CCNA_03139	0.85	+1.7
3,290,036	-		CCNA_03139	0.85	+0.5
3,290,036	-		CCNA_03139	0.85	+0.1
3,290,036	-		CCNA_03139	0.85	+0.6
3,290,041	-		CCNA_03139	0.85	+0.3
3,290,043	-		CCNA_03139	0.85	-0.3
3,290,096	+		CCNA_03139	0.88	+1.3
3,290,104	-		CCNA_03139	0.88	-0.2
3,290,104	-		CCNA_03139	0.88	-0.2
3,290,112	-		CCNA_03139	0.89	+0.6
3,290,125	-		CCNA_03139	0.89	+0.2
3,290,157	+				-0.1
3,290,159	+				-0.1
3,290,159	+				-1.8
3,290,180	+				-1.0
3,290,197	+				-0.4
3,290,297	-				+0.3
3,290,411	+				-0.6
3,290,456	+				-0.1
3,290,456	+				+0.1
3,290,463	+				+0.3
3,290,463	+				-0.0
3,290,463	+				-0.5
3,290,471	-				-0.0
3,290,567	-		CCNA_03140	0.16	-0.0
3,290,581	+		CCNA_03140	0.18	+1.1
3,290,581	+		CCNA_03140	0.18	+0.1
3,290,586	+		CCNA_03140	0.19	-0.5
3,290,589	-		CCNA_03140	0.19	-0.5
3,290,589	-		CCNA_03140	0.19	+0.1
3,290,711	+		CCNA_03140	0.33	-0.1
3,290,711	+		CCNA_03140	0.33	+0.3
3,290,729	-		CCNA_03140	0.35	-2.1
3,290,729	-		CCNA_03140	0.35	-1.2
3,290,746	-		CCNA_03140	0.36	-1.4
3,290,758	+		CCNA_03140	0.38	+1.0
3,290,758	+		CCNA_03140	0.38	-0.0
3,290,776	-		CCNA_03140	0.40	+0.6
3,290,790	-		CCNA_03140	0.41	+1.6
3,290,792	+		CCNA_03140	0.42	+0.1
3,290,835	+		CCNA_03140	0.46	+0.2
3,290,873	-		CCNA_03140	0.51	+0.4
3,290,889	+		CCNA_03140	0.53	-0.3
3,290,889	+		CCNA_03140	0.53	-0.3
3,290,889	+		CCNA_03140	0.53	+0.2
3,290,915	-		CCNA_03140	0.55	-0.8
3,290,945	-		CCNA_03140	0.59	+0.1
3,290,970	-		CCNA_03140	0.62	-1.2
3,291,027	+		CCNA_03140	0.68	+0.3
3,291,044	-		CCNA_03140	0.70	+0.4
3,291,062	+		CCNA_03140	0.72	-0.3
3,291,120	+		CCNA_03140	0.78	-0.3
3,291,127	-		CCNA_03140	0.79	+0.2
3,291,127	-		CCNA_03140	0.79	+0.7
3,291,129	+		CCNA_03140	0.79	-0.1
3,291,161	+		CCNA_03140	0.83	+0.6
3,291,169	-		CCNA_03140	0.84	+0.6
3,291,175	+		CCNA_03140	0.85	+0.8
3,291,175	+		CCNA_03140	0.85	-0.1
3,291,233	-				-0.3
3,291,252	+				+0.8
3,291,258	+				+0.1
3,291,258	+				-0.1
3,291,267	+				+0.2
3,291,278	-				+0.1
3,291,288	-				+0.6
3,291,305	+				-0.8
3,291,319	-				+0.1