Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02396

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
2,537,671	+		CCNA_02394	0.42	-0.1
2,537,672	-		CCNA_02394	0.43	-1.2
2,537,704	+		CCNA_02394	0.47	+0.1
2,537,724	+		CCNA_02394	0.50	-0.6
2,537,724	+		CCNA_02394	0.50	+0.3
2,537,727	-		CCNA_02394	0.51	-0.5
2,537,737	-		CCNA_02394	0.52	-1.0
2,537,796	+		CCNA_02394	0.61	-0.7
2,537,804	-		CCNA_02394	0.62	+0.4
2,537,826	-		CCNA_02394	0.66	+0.7
2,537,832	+		CCNA_02394	0.67	-0.9
2,537,832	+		CCNA_02394	0.67	-1.1
2,537,842	+		CCNA_02394	0.68	+0.2
2,537,873	-		CCNA_02394	0.73	-0.1
2,537,880	+		CCNA_02394	0.74	+1.4
2,537,884	+		CCNA_02394	0.75	+0.7
2,537,924	+		CCNA_02394	0.81	+0.1
2,537,932	+		CCNA_02394	0.82	+0.5
2,537,935	+		CCNA_02394	0.82	-2.6
2,537,948	-		CCNA_02394	0.84	+0.3
2,537,948	-		CCNA_02394	0.84	+0.6
2,537,984	+		CCNA_02394	0.90	+0.5
2,538,003	-				+0.5
2,538,025	-				+0.4
2,538,044	+				-1.4
2,538,046	+				-0.1
2,538,054	+				-0.5
2,538,054	-				-2.0
2,538,059	+				-0.3
2,538,062	-				+0.7
2,538,093	-				+0.5
2,538,127	-				-0.2
2,538,141	+				+0.7
2,538,149	-				-0.4
2,538,149	-				-0.0
2,538,195	-		CCNA_02395	0.11	+1.5
2,538,218	-		CCNA_02395	0.18	+0.9
2,538,245	-		CCNA_02395	0.26	+0.3
2,538,286	+		CCNA_02395	0.38	-0.2
2,538,301	-		CCNA_02395	0.43	+0.4
2,538,320	+		CCNA_02395	0.48	+1.2
2,538,338	-		CCNA_02395	0.54	+0.9
2,538,341	+		CCNA_02395	0.55	-0.5
2,538,348	+		CCNA_02395	0.57	-0.3
2,538,357	+		CCNA_02395	0.60	-0.7
2,538,376	-		CCNA_02395	0.65	-0.1
2,538,377	+		CCNA_02395	0.66	+1.9
2,538,377	+		CCNA_02395	0.66	-0.9
2,538,385	-		CCNA_02395	0.68	+1.3
2,538,393	+		CCNA_02395	0.71	-0.1
2,538,402	-		CCNA_02395	0.73	+1.9
2,538,402	-		CCNA_02395	0.73	+0.6
2,538,472	+				+0.9
2,538,496	+				-1.1
2,538,540	-				+0.5
2,538,545	-				+0.8
2,538,546	+				-0.4
2,538,554	-				+0.0
2,538,554	-				+0.1
2,538,576	+				-0.6
2,538,576	+				+0.1
2,538,576	+				-1.8
2,538,576	+				+0.3
2,538,576	+				-0.0
2,538,576	+				-0.5
2,538,584	-				+0.7
2,538,584	-				+0.2
2,538,584	-				-1.0
2,538,584	-				-2.4
2,538,619	+				+0.4
2,538,627	+				-0.2
2,538,635	-				+1.1
2,538,640	-				+0.4
2,538,678	+				+0.8
2,538,678	+				-1.8
2,538,678	+				-0.4
2,538,678	+				-1.1
2,538,680	+				+0.8
2,538,686	-				-0.6
2,538,686	-				-1.0
2,538,688	-				-0.3
2,538,688	-				-1.0
2,538,688	-				-0.7
2,538,690	+				+0.1
2,538,695	+				-0.5
2,538,695	+				-0.9
2,538,703	-				-0.2
2,538,703	-				-1.4
2,538,703	-				-0.8
2,538,703	-				+0.1
2,538,703	-				-1.9
2,538,738	-		CCNA_02396	0.11	-1.1
2,538,752	+		CCNA_02396	0.12	+0.2
2,538,819	+		CCNA_02396	0.22	-0.8
2,538,827	-		CCNA_02396	0.23	-1.2
2,538,833	+		CCNA_02396	0.24	-2.0
2,538,851	+		CCNA_02396	0.26	-1.5
2,538,857	+		CCNA_02396	0.27	-1.1
2,538,877	+		CCNA_02396	0.30	+2.5
2,538,884	+		CCNA_02396	0.31	-0.9
2,538,952	+		CCNA_02396	0.40	-1.7
2,538,952	+		CCNA_02396	0.40	-2.7
2,538,981	-		CCNA_02396	0.44	-1.0
2,539,025	-		CCNA_02396	0.50	+0.2
2,539,093	-		CCNA_02396	0.59	+0.7
2,539,104	-		CCNA_02396	0.61	-0.4
2,539,118	+		CCNA_02396	0.63	+0.8
2,539,118	+		CCNA_02396	0.63	+1.0
2,539,123	+		CCNA_02396	0.63	-0.1
2,539,126	-		CCNA_02396	0.64	+0.5
2,539,131	-		CCNA_02396	0.64	+0.1
2,539,131	-		CCNA_02396	0.64	-0.1
2,539,195	+		CCNA_02396	0.73	-0.6
2,539,203	-		CCNA_02396	0.74	+0.4
2,539,216	+		CCNA_02396	0.76	+1.2
2,539,224	-		CCNA_02396	0.77	-1.3
2,539,224	-		CCNA_02396	0.77	+1.9
2,539,235	+		CCNA_02396	0.79	+0.9
2,539,235	+		CCNA_02396	0.79	+0.8
2,539,235	+		CCNA_02396	0.79	+1.6
2,539,235	+		CCNA_02396	0.79	+0.4
2,539,235	+		CCNA_02396	0.79	-2.2
2,539,243	-		CCNA_02396	0.80	+0.5
2,539,262	+		CCNA_02396	0.82	-1.2
2,539,268	+		CCNA_02396	0.83	+2.2
2,539,270	-		CCNA_02396	0.84	-0.3
2,539,270	-		CCNA_02396	0.84	-3.8
2,539,270	-		CCNA_02396	0.84	+0.5
2,539,270	-		CCNA_02396	0.84	-0.8
2,539,304	+		CCNA_02396	0.88	-0.2
2,539,345	-				-0.2
2,539,353	+				+1.0
2,539,361	-				+0.8
2,539,464	+				-0.1
2,539,472	-				-0.4
2,539,487	-				+0.7
2,539,487	-				-2.6
2,539,513	+				+0.6
2,539,576	+		CCNA_02397	0.13	-0.4
2,539,584	-		CCNA_02397	0.14	+0.2
2,539,655	-		CCNA_02397	0.24	-1.0
2,539,724	+		CCNA_02397	0.34	+0.6
2,539,724	+		CCNA_02397	0.34	+0.4
2,539,732	-		CCNA_02397	0.35	-1.3
2,539,746	+		CCNA_02397	0.37	-0.0
2,539,766	+		CCNA_02397	0.39	-0.1
2,539,774	-		CCNA_02397	0.41	+1.3
2,539,774	-		CCNA_02397	0.41	-0.8
2,539,774	-		CCNA_02397	0.41	-2.6
2,539,774	-		CCNA_02397	0.41	-0.1
2,539,774	-		CCNA_02397	0.41	-0.2
2,539,904	-		CCNA_02397	0.59	-1.5
2,539,904	-		CCNA_02397	0.59	-0.2
2,539,913	+		CCNA_02397	0.60	+0.1
2,539,921	-		CCNA_02397	0.61	+0.4
2,539,921	-		CCNA_02397	0.61	-0.8
2,539,962	-		CCNA_02397	0.67	+0.7
2,539,979	+		CCNA_02397	0.69	+0.1
2,539,987	-		CCNA_02397	0.70	-0.1
2,539,992	-		CCNA_02397	0.71	+0.2
2,539,995	+		CCNA_02397	0.71	+0.2
2,540,030	-		CCNA_02397	0.76	-1.5
2,540,083	-		CCNA_02397	0.83	-1.4
2,540,090	+		CCNA_02397	0.84	-0.1
2,540,090	+		CCNA_02397	0.84	-1.4
2,540,121	+		CCNA_02397	0.89	+0.0
2,540,129	-		CCNA_02397	0.90	-1.2
2,540,129	-		CCNA_02397	0.90	-0.1
2,540,134	-				-1.3
2,540,170	+				+0.4
2,540,170	+				-1.2
2,540,195	+				-0.2
2,540,195	+				-0.4
2,540,198	-				+0.5
2,540,204	+				+0.4
2,540,223	+				+0.4
2,540,223	+				-0.8
2,540,231	-				-0.1
2,540,256	-				-0.1
2,540,275	+				+0.6
2,540,283	-				-1.1
2,540,283	-				-0.7
2,540,283	-				-0.1
2,540,296	+				-0.2
2,540,325	+		CCNA_02398	0.13	+1.9
2,540,325	+		CCNA_02398	0.13	+0.3
2,540,325	+		CCNA_02398	0.13	+0.3
2,540,333	-		CCNA_02398	0.14	+0.6
2,540,333	-		CCNA_02398	0.14	+1.1
2,540,348	+		CCNA_02398	0.15	-0.7
2,540,360	+		CCNA_02398	0.16	-0.5
2,540,368	-		CCNA_02398	0.17	+0.4
2,540,376	+		CCNA_02398	0.18	-0.2
2,540,376	+		CCNA_02398	0.18	-1.8
2,540,376	+		CCNA_02398	0.18	-0.8
2,540,376	+		CCNA_02398	0.18	+0.7
2,540,384	-		CCNA_02398	0.19	+0.6
2,540,384	-		CCNA_02398	0.19	-0.3
2,540,384	-		CCNA_02398	0.19	+0.1
2,540,384	-		CCNA_02398	0.19	+0.6
2,540,384	-		CCNA_02398	0.19	-0.9
2,540,384	-		CCNA_02398	0.19	-0.4
2,540,384	-		CCNA_02398	0.19	+0.2