Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01993
Experiment: PYE with CHIR-090 10 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with CHIR-090 10 ug/mL |
---|---|---|---|---|---|
remove | |||||
2,139,756 | - | -0.7 | |||
2,139,786 | - | -0.1 | |||
2,139,792 | - | +0.7 | |||
2,139,807 | - | +0.3 | |||
2,140,069 | - | CCNA_01993 | 0.29 | +1.2 | |
2,140,074 | - | CCNA_01993 | 0.29 | +0.3 | |
2,140,156 | - | CCNA_01993 | 0.36 | +1.3 | |
2,140,253 | - | CCNA_01993 | 0.44 | +0.3 | |
2,140,277 | - | CCNA_01993 | 0.45 | -0.8 | |
2,140,344 | - | CCNA_01993 | 0.51 | +0.1 | |
2,140,503 | - | CCNA_01993 | 0.63 | +1.6 | |
2,140,808 | + | CCNA_01993 | 0.87 | +1.0 | |
2,140,808 | + | CCNA_01993 | 0.87 | +0.2 | |
2,140,816 | - | CCNA_01993 | 0.88 | +1.3 | |
2,140,816 | - | CCNA_01993 | 0.88 | +1.1 | |
2,140,816 | - | CCNA_01993 | 0.88 | -0.2 | |
2,140,816 | - | CCNA_01993 | 0.88 | -1.0 | |
2,140,816 | - | CCNA_01993 | 0.88 | +0.7 | |
2,140,816 | - | CCNA_01993 | 0.88 | +1.4 | |
2,140,816 | - | CCNA_01993 | 0.88 | +0.8 | |
2,140,816 | - | CCNA_01993 | 0.88 | +1.7 | |
2,140,833 | - | CCNA_01993 | 0.89 | +0.4 | |
2,140,922 | - | -0.7 |
Or see this region's nucleotide sequence