Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01840

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,969,919	+		CCNA_01837	0.84	-1.8
1,969,927	-		CCNA_01837	0.85	-0.3
1,969,927	-		CCNA_01837	0.85	-0.4
1,969,978	+		CCNA_01837	0.90	+0.7
1,969,978	+		CCNA_01837	0.90	-0.8
1,969,986	-				+0.0
1,969,988	+				-0.5
1,970,001	-				-1.5
1,970,001	-				-1.6
1,970,216	-				-0.3
1,970,275	-				-0.1
1,970,282	-				+0.4
1,970,323	-				-0.3
1,970,333	+				-1.7
1,970,338	+				+0.8
1,970,389	-				-1.0
1,970,425	+				+0.0
1,970,492	+				+0.1
1,970,516	-				+0.1
1,970,525	+				-0.4
1,970,575	+				-3.4
1,970,583	-				-0.1
1,970,583	-				-1.3
1,970,583	-				-1.5
1,970,599	+				+0.5
1,970,614	+				-1.4
1,970,622	+				-1.9
1,970,633	+				+0.5
1,970,633	+				-0.4
1,970,641	-				+0.0
1,970,641	-				+0.5
1,970,641	-				+0.5
1,970,654	+				-1.4
1,970,706	+				-1.8
1,970,760	-				-1.2
1,970,784	+				-0.4
1,970,793	+				-0.6
1,970,803	+				+0.5
1,970,842	-				+0.2
1,970,847	-				+0.9
1,970,941	+				-0.8
1,970,962	+				-0.9
1,970,963	+				-0.1
1,970,995	-				+0.8
1,970,995	-				+0.9
1,971,016	-				+0.4
1,971,056	-		CCNA_01840	0.12	+0.3
1,971,121	+		CCNA_01840	0.17	-2.6
1,971,149	-		CCNA_01840	0.19	+0.5
1,971,159	-		CCNA_01840	0.19	+0.4
1,971,195	-		CCNA_01840	0.22	+0.7
1,971,219	-		CCNA_01840	0.23	-0.3
1,971,221	+		CCNA_01840	0.23	-1.1
1,971,229	-		CCNA_01840	0.24	+1.0
1,971,229	-		CCNA_01840	0.24	+1.1
1,971,268	+		CCNA_01840	0.27	-0.6
1,971,364	-		CCNA_01840	0.33	+1.2
1,971,379	-		CCNA_01840	0.34	-0.1
1,971,433	-		CCNA_01840	0.38	+1.5
1,971,507	+		CCNA_01840	0.43	+1.0
1,971,515	-		CCNA_01840	0.44	+0.4
1,971,615	-		CCNA_01840	0.51	+0.2
1,971,636	-		CCNA_01840	0.52	+0.6
1,971,655	-		CCNA_01840	0.54	-0.3
1,971,761	+		CCNA_01840	0.61	+1.3
1,971,780	+		CCNA_01840	0.62	+0.7
1,971,780	+		CCNA_01840	0.62	-0.1
1,971,788	-		CCNA_01840	0.63	+1.2
1,971,788	-		CCNA_01840	0.63	+0.1
1,971,813	+		CCNA_01840	0.65	-1.0
1,971,895	+		CCNA_01840	0.70	+1.0
1,971,898	-		CCNA_01840	0.70	+0.8
1,971,898	-		CCNA_01840	0.70	+0.6
1,971,913	-		CCNA_01840	0.71	+0.8
1,971,945	-		CCNA_01840	0.74	+1.1
1,971,947	+		CCNA_01840	0.74	-0.7
1,972,031	-		CCNA_01840	0.80	+0.6
1,972,057	-		CCNA_01840	0.81	+0.0
1,972,067	-		CCNA_01840	0.82	+0.5
1,972,078	-		CCNA_01840	0.83	+0.7
1,972,197	-				+0.3
1,972,197	-				-0.5
1,972,212	+				-0.4
1,972,217	+				-1.7
1,972,225	-				+0.6
1,972,227	+				-0.3
1,972,243	+				+0.1
1,972,251	-				+0.6
1,972,282	+				-2.2
1,972,498	+				-2.0
1,972,506	-				+0.4
1,972,506	-				-1.4
1,972,506	-				-0.0
1,972,519	-				-0.7
1,972,527	-				-1.0
1,972,574	-				+0.6
1,972,598	+				+0.5
1,972,642	+				-0.4
1,972,646	+				+0.5
1,972,684	-		CCNA_01841	0.12	-0.8
1,972,686	+		CCNA_01841	0.12	+0.7
1,972,694	-		CCNA_01841	0.13	+0.5
1,972,751	+		CCNA_01841	0.16	-0.7
1,972,757	+		CCNA_01841	0.16	-1.7
1,972,771	+		CCNA_01841	0.17	-0.7
1,972,789	-		CCNA_01841	0.18	-0.4
1,972,864	+		CCNA_01841	0.23	+2.5
1,972,939	+		CCNA_01841	0.28	+2.0
1,973,035	+		CCNA_01841	0.34	+0.6
1,973,071	-		CCNA_01841	0.36	+0.2
1,973,086	-		CCNA_01841	0.37	+0.0
1,973,086	-		CCNA_01841	0.37	+0.2
1,973,107	+		CCNA_01841	0.38	-0.0
1,973,138	-		CCNA_01841	0.40	-0.4
1,973,225	+		CCNA_01841	0.45	+0.2
1,973,283	+		CCNA_01841	0.49	+0.5
1,973,289	+		CCNA_01841	0.49	-0.3
1,973,294	+		CCNA_01841	0.50	-1.9
1,973,294	+		CCNA_01841	0.50	+0.1
1,973,297	-		CCNA_01841	0.50	-1.8
1,973,302	-		CCNA_01841	0.50	-0.6
1,973,319	+		CCNA_01841	0.51	-0.6
1,973,319	+		CCNA_01841	0.51	-0.5