Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01820

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,945,241	+		CCNA_01818	0.35	+0.3
1,945,248	-		CCNA_01818	0.36	-0.9
1,945,272	+		CCNA_01818	0.38	+0.7
1,945,312	+		CCNA_01818	0.43	+0.9
1,945,318	+		CCNA_01818	0.44	+0.9
1,945,326	-		CCNA_01818	0.45	+1.9
1,945,326	-		CCNA_01818	0.45	-0.7
1,945,402	+		CCNA_01818	0.53	+0.7
1,945,416	-		CCNA_01818	0.55	+1.2
1,945,467	+		CCNA_01818	0.61	+0.1
1,945,509	-		CCNA_01818	0.66	-1.2
1,945,526	+		CCNA_01818	0.68	-0.3
1,945,526	+		CCNA_01818	0.68	-0.2
1,945,536	+		CCNA_01818	0.69	+0.0
1,945,537	-		CCNA_01818	0.69	-1.1
1,945,583	-		CCNA_01818	0.74	-1.1
1,945,585	+		CCNA_01818	0.75	+0.6
1,945,591	-		CCNA_01818	0.75	-2.1
1,945,593	-		CCNA_01818	0.75	-0.8
1,945,608	+		CCNA_01818	0.77	-0.4
1,945,628	+		CCNA_01818	0.80	+0.1
1,945,716	+		CCNA_01818	0.90	+0.9
1,945,724	-				+0.1
1,945,898	+				+0.3
1,945,915	-				-1.2
1,946,211	+				+0.9
1,946,219	-				-0.1
1,946,219	-				-0.4
1,946,219	-				+0.5
1,946,219	-				-0.7
1,946,219	-				-1.1
1,946,447	+		CCNA_01820	0.17	-1.4
1,946,449	-		CCNA_01820	0.17	+2.1
1,946,524	-		CCNA_01820	0.22	+0.8
1,946,524	-		CCNA_01820	0.22	+1.1
1,946,524	-		CCNA_01820	0.22	-2.5
1,946,580	+		CCNA_01820	0.27	+0.2
1,946,633	-		CCNA_01820	0.31	+0.8
1,946,645	+		CCNA_01820	0.31	+0.9
1,946,648	-		CCNA_01820	0.32	-1.3
1,946,648	-		CCNA_01820	0.32	-0.5
1,946,681	+		CCNA_01820	0.34	+0.2
1,946,681	+		CCNA_01820	0.34	-0.5
1,946,681	+		CCNA_01820	0.34	-0.6
1,946,681	+		CCNA_01820	0.34	+0.1
1,946,689	-		CCNA_01820	0.35	-0.5
1,946,770	-		CCNA_01820	0.41	-0.6
1,946,831	+		CCNA_01820	0.45	+2.0
1,946,831	+		CCNA_01820	0.45	+1.0
1,946,858	+		CCNA_01820	0.47	-0.4
1,946,866	+		CCNA_01820	0.48	+0.9
1,946,909	+		CCNA_01820	0.51	+0.0
1,946,909	+		CCNA_01820	0.51	+1.1
1,946,942	-		CCNA_01820	0.54	-0.5
1,946,962	+		CCNA_01820	0.55	+0.8
1,946,969	-		CCNA_01820	0.56	-0.7
1,947,067	-		CCNA_01820	0.63	+0.7
1,947,090	+		CCNA_01820	0.65	+0.2
1,947,126	-		CCNA_01820	0.67	+1.9
1,947,175	+		CCNA_01820	0.71	+0.7
1,947,203	+		CCNA_01820	0.73	+1.1
1,947,208	+		CCNA_01820	0.73	+0.6
1,947,211	-		CCNA_01820	0.74	-0.5
1,947,222	+		CCNA_01820	0.74	-0.1
1,947,230	-		CCNA_01820	0.75	+1.9
1,947,230	-		CCNA_01820	0.75	-2.0
1,947,318	+		CCNA_01820	0.82	-0.2
1,947,324	-		CCNA_01820	0.82	+0.8
1,947,334	-		CCNA_01820	0.83	+1.6
1,947,344	-		CCNA_01820	0.84	+0.6
1,947,390	-		CCNA_01820	0.87	-1.6
1,947,409	-		CCNA_01820	0.88	+0.3
1,947,416	+		CCNA_01820	0.89	+0.2
1,947,418	-		CCNA_01820	0.89	-0.8
1,947,430	-				+0.5
1,947,472	+				+1.0
1,947,472	+				+0.5
1,947,574	-				+2.1
1,947,587	-				-0.5
1,947,587	-				+0.4
1,947,599	-				+0.5
1,947,625	+				-0.2
1,947,625	+				+0.1
1,947,768	-		CCNA_01821	0.25	+0.3
1,947,880	-		CCNA_01821	0.39	+2.1
1,947,894	+		CCNA_01821	0.40	-0.7
1,947,960	+		CCNA_01821	0.48	+1.0
1,947,968	-		CCNA_01821	0.49	-0.4
1,947,971	+		CCNA_01821	0.50	+0.7
1,947,979	-		CCNA_01821	0.51	-0.1
1,947,979	-		CCNA_01821	0.51	+0.3
1,948,142	+		CCNA_01821	0.70	+0.2
1,948,171	+		CCNA_01821	0.74	+1.5
1,948,179	-		CCNA_01821	0.75	-1.2
1,948,191	-		CCNA_01821	0.76	-0.5
1,948,201	+		CCNA_01821	0.77	-0.1
1,948,219	+		CCNA_01821	0.80	+0.6
1,948,227	-		CCNA_01821	0.81	-0.8
1,948,228	-		CCNA_01821	0.81	-1.4
1,948,262	+		CCNA_01821	0.85	-1.5
1,948,267	+		CCNA_01821	0.85	-1.6
1,948,270	-		CCNA_01821	0.86	+0.2
1,948,314	-				+1.0
1,948,325	-				-0.3
1,948,450	-				+0.5
1,948,461	-				-0.8
1,948,509	+		CCNA_01822	0.11	-0.3
1,948,525	-		CCNA_01822	0.12	+0.7
1,948,559	-		CCNA_01822	0.15	+0.1