Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01712

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,843,298	+		CCNA_01711	0.35	+0.1
1,843,303	+		CCNA_01711	0.35	+0.1
1,843,306	-		CCNA_01711	0.36	+0.0
1,843,313	-		CCNA_01711	0.36	-0.1
1,843,316	-		CCNA_01711	0.36	-0.1
1,843,316	-		CCNA_01711	0.36	+0.4
1,843,316	-		CCNA_01711	0.36	+0.4
1,843,336	+		CCNA_01711	0.38	+0.1
1,843,340	+		CCNA_01711	0.38	+1.8
1,843,344	-		CCNA_01711	0.38	-0.2
1,843,361	+		CCNA_01711	0.39	-0.5
1,843,361	+		CCNA_01711	0.39	-1.3
1,843,369	-		CCNA_01711	0.40	+0.4
1,843,379	-		CCNA_01711	0.41	+0.9
1,843,419	-		CCNA_01711	0.43	-1.9
1,843,419	-		CCNA_01711	0.43	-0.9
1,843,427	+		CCNA_01711	0.44	-0.1
1,843,476	-		CCNA_01711	0.47	-0.4
1,843,510	+		CCNA_01711	0.49	+0.6
1,843,543	+		CCNA_01711	0.52	-0.6
1,843,551	-		CCNA_01711	0.52	+0.8
1,843,551	-		CCNA_01711	0.52	-0.3
1,843,592	-		CCNA_01711	0.55	+0.6
1,843,641	-		CCNA_01711	0.58	+0.5
1,843,647	+		CCNA_01711	0.59	+0.6
1,843,655	-		CCNA_01711	0.59	-0.0
1,843,664	-		CCNA_01711	0.60	-0.1
1,843,664	-		CCNA_01711	0.60	+0.4
1,843,664	-		CCNA_01711	0.60	+1.5
1,843,665	-		CCNA_01711	0.60	-0.2
1,843,672	+		CCNA_01711	0.60	+0.4
1,843,674	-		CCNA_01711	0.61	+0.9
1,843,674	-		CCNA_01711	0.61	+0.9
1,843,679	-		CCNA_01711	0.61	+1.0
1,843,723	-		CCNA_01711	0.64	-0.5
1,843,724	-		CCNA_01711	0.64	+1.4
1,843,743	-		CCNA_01711	0.65	-0.7
1,843,774	-		CCNA_01711	0.67	-0.8
1,843,880	-		CCNA_01711	0.75	+0.7
1,843,896	-		CCNA_01711	0.76	+0.1
1,843,940	+		CCNA_01711	0.79	-1.6
1,843,942	-		CCNA_01711	0.79	+0.3
1,843,995	-		CCNA_01711	0.82	-0.3
1,844,002	+		CCNA_01711	0.83	-0.8
1,844,080	+		CCNA_01711	0.88	-1.0
1,844,099	+		CCNA_01711	0.89	-2.3
1,844,099	-		CCNA_01711	0.89	-0.1
1,844,100	+		CCNA_01711	0.89	-0.9
1,844,159	-				-1.0
1,844,211	+				-0.6
1,844,224	-				-0.2
1,844,248	-				+0.5
1,844,398	-		CCNA_01712	0.40	-0.1
1,844,473	-		CCNA_01712	0.59	+0.3
1,844,473	-		CCNA_01712	0.59	+0.8
1,844,508	-		CCNA_01712	0.68	+0.5
1,844,520	-		CCNA_01712	0.72	+0.4
1,844,520	-		CCNA_01712	0.72	-0.6
1,844,527	-		CCNA_01712	0.73	+0.6
1,844,541	-		CCNA_01712	0.77	+0.7
1,844,542	-		CCNA_01712	0.77	+0.5
1,844,575	-		CCNA_01712	0.86	+0.9
1,844,721	+				+0.3
1,844,735	+				+0.4
1,844,762	+				+0.2
1,844,768	+				+2.0
1,844,783	+				+0.4
1,844,823	+		CCNA_01713	0.12	-0.7
1,844,823	+		CCNA_01713	0.12	+0.0
1,844,823	+		CCNA_01713	0.12	+0.1
1,844,823	+		CCNA_01713	0.12	+0.2
1,844,823	+		CCNA_01713	0.12	+0.8
1,844,828	+		CCNA_01713	0.13	-0.1
1,844,845	+		CCNA_01713	0.16	+0.4
1,844,853	-		CCNA_01713	0.17	-0.3
1,844,857	+		CCNA_01713	0.18	+0.1
1,844,907	+		CCNA_01713	0.27	-1.3
1,844,927	+		CCNA_01713	0.30	+0.1
1,844,940	-		CCNA_01713	0.32	+0.3
1,844,962	-		CCNA_01713	0.36	-1.6
1,844,962	-		CCNA_01713	0.36	-0.0
1,845,109	-		CCNA_01713	0.62	-2.0
1,845,159	+		CCNA_01713	0.70	-0.4
1,845,193	+		CCNA_01713	0.76	+0.4
1,845,193	+		CCNA_01713	0.76	-0.8
1,845,196	-		CCNA_01713	0.77	+0.0
1,845,245	+				+0.3
1,845,253	-				-0.0
1,845,253	-				-0.2
1,845,266	+				+0.6
1,845,268	-				-0.6
1,845,268	-				-0.1
1,845,276	+				-0.1
1,845,284	-				+2.8
1,845,307	-				+0.1
1,845,307	-				-0.2
1,845,314	+				+0.4
1,845,319	+				-0.1
1,845,330	+				+0.7
1,845,338	-		CCNA_03956	0.52	+0.7
1,845,345	+		CCNA_03956	0.55	+0.8
1,845,349	+		CCNA_03956	0.58	+0.2
1,845,362	+		CCNA_03956	0.65	+0.7
1,845,362	+		CCNA_03956	0.65	+0.1
1,845,362	+		CCNA_03956	0.65	+0.3
1,845,365	-		CCNA_03956	0.66	+0.6
1,845,370	-		CCNA_03956	0.69	+0.1
1,845,396	+		CCNA_03956	0.83	+0.6
1,845,430	+				-0.3
1,845,430	+				-0.2
1,845,430	+				-0.0
1,845,430	+				+0.1
1,845,430	+				-0.0
1,845,430	+				+0.1
1,845,430	+				+0.4
1,845,430	+				-1.0
1,845,430	-				+0.2
1,845,438	-				+0.3
1,845,481	-		CCNA_01714	0.16	+0.1
1,845,503	+		CCNA_01714	0.22	-0.1
1,845,511	-		CCNA_01714	0.24	-0.5
1,845,521	+		CCNA_01714	0.27	-0.2
1,845,529	-		CCNA_01714	0.30	-0.5
1,845,596	-		CCNA_01714	0.49	-1.0
1,845,620	+		CCNA_01714	0.56	+0.2