Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01667

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,788,760	+		CCNA_01666	0.64	+0.4
1,788,784	+		CCNA_01666	0.65	+0.4
1,788,784	+		CCNA_01666	0.65	-0.6
1,788,792	-		CCNA_01666	0.65	+0.4
1,788,797	-		CCNA_01666	0.65	-0.7
1,788,907	+		CCNA_01666	0.69	-0.2
1,788,907	+		CCNA_01666	0.69	+1.5
1,788,925	-		CCNA_01666	0.70	-0.6
1,788,930	-		CCNA_01666	0.70	-1.7
1,789,040	-		CCNA_01666	0.74	+0.0
1,789,042	+		CCNA_01666	0.74	+1.2
1,789,042	+		CCNA_01666	0.74	+0.3
1,789,042	+		CCNA_01666	0.74	+0.8
1,789,042	+		CCNA_01666	0.74	+0.9
1,789,050	-		CCNA_01666	0.74	+2.0
1,789,050	-		CCNA_01666	0.74	-0.6
1,789,050	-		CCNA_01666	0.74	-0.9
1,789,061	+		CCNA_01666	0.75	-0.4
1,789,061	+		CCNA_01666	0.75	+0.1
1,789,061	+		CCNA_01666	0.75	+1.8
1,789,061	+		CCNA_01666	0.75	-0.3
1,789,069	-		CCNA_01666	0.75	-1.1
1,789,069	-		CCNA_01666	0.75	-0.3
1,789,069	-		CCNA_01666	0.75	+0.4
1,789,111	-		CCNA_01666	0.77	+1.7
1,789,142	-		CCNA_01666	0.78	-0.4
1,789,142	-		CCNA_01666	0.78	+0.1
1,789,142	-		CCNA_01666	0.78	-0.4
1,789,169	+		CCNA_01666	0.79	-0.4
1,789,169	+		CCNA_01666	0.79	-1.6
1,789,169	+		CCNA_01666	0.79	+0.1
1,789,178	+		CCNA_01666	0.79	+0.8
1,789,212	+		CCNA_01666	0.80	-0.2
1,789,270	-		CCNA_01666	0.83	+0.6
1,789,279	+		CCNA_01666	0.83	+1.4
1,789,279	+		CCNA_01666	0.83	-1.1
1,789,279	+		CCNA_01666	0.83	-2.1
1,789,287	-		CCNA_01666	0.83	-0.2
1,789,287	-		CCNA_01666	0.83	-1.2
1,789,287	-		CCNA_01666	0.83	+0.2
1,789,287	-		CCNA_01666	0.83	-1.4
1,789,287	-		CCNA_01666	0.83	-0.2
1,789,291	+		CCNA_01666	0.83	+0.9
1,789,362	+		CCNA_01666	0.86	+0.2
1,789,364	-		CCNA_01666	0.86	-0.5
1,789,397	+		CCNA_01666	0.87	+0.5
1,789,405	+		CCNA_01666	0.88	-0.6
1,789,413	-		CCNA_01666	0.88	+1.0
1,789,420	+		CCNA_01666	0.88	+0.7
1,789,424	+		CCNA_01666	0.88	+0.2
1,789,441	-		CCNA_01666	0.89	-1.2
1,789,460	+		CCNA_01666	0.90	-0.2
1,789,468	-				+1.0
1,789,561	+				-0.5
1,789,561	+				-0.5
1,789,591	+				-1.2
1,789,591	+				+0.4
1,789,591	+				+0.1
1,789,591	+				+0.0
1,789,599	-				+0.6
1,789,610	+				+0.5
1,789,640	-				+0.5
1,789,698	+				+0.8
1,789,698	+				-1.8
1,789,698	+				-0.7
1,789,706	-				-0.9
1,789,706	-				+0.0
1,789,706	-				-1.2
1,789,706	-				-0.9
1,789,706	-				+0.0
1,789,728	+				+1.3
1,789,784	+				+0.2
1,789,851	+		CCNA_01667	0.16	+0.3
1,789,880	-		CCNA_01667	0.20	-1.1
1,789,880	-		CCNA_01667	0.20	-1.3
1,789,885	-		CCNA_01667	0.20	-1.0
1,789,907	+		CCNA_01667	0.24	+0.2
1,789,913	+		CCNA_01667	0.24	-0.6
1,789,915	-		CCNA_01667	0.25	+0.8
1,789,916	-		CCNA_01667	0.25	-2.5
1,789,938	-		CCNA_01667	0.28	-0.6
1,789,938	-		CCNA_01667	0.28	-1.7
1,789,945	+		CCNA_01667	0.29	+0.1
1,789,976	+		CCNA_01667	0.33	-1.3
1,789,978	-		CCNA_01667	0.34	-0.7
1,790,029	-		CCNA_01667	0.41	+0.6
1,790,044	-		CCNA_01667	0.43	-1.2
1,790,142	-		CCNA_01667	0.57	+0.0
1,790,163	+		CCNA_01667	0.60	-1.4
1,790,171	-		CCNA_01667	0.61	+0.0
1,790,171	-		CCNA_01667	0.61	-1.1
1,790,176	-		CCNA_01667	0.62	+0.2
1,790,211	+		CCNA_01667	0.67	-0.6
1,790,220	+		CCNA_01667	0.68	-0.1
1,790,228	+		CCNA_01667	0.70	-0.2
1,790,228	+		CCNA_01667	0.70	-1.8
1,790,236	-		CCNA_01667	0.71	-0.1
1,790,261	+		CCNA_01667	0.74	-0.6
1,790,319	-		CCNA_01667	0.83	-0.7
1,790,323	+		CCNA_01667	0.83	-1.3
1,790,323	+		CCNA_01667	0.83	-1.3
1,790,323	+		CCNA_01667	0.83	-0.2
1,790,332	-		CCNA_01667	0.84	+0.8
1,790,333	-		CCNA_01667	0.85	-0.3
1,790,359	+		CCNA_01667	0.88	+0.5
1,790,365	+		CCNA_01667	0.89	+0.4
1,790,378	-				+0.7
1,790,427	-				+1.7
1,790,447	+				-0.3
1,790,455	-				+1.0
1,790,455	-				-1.7
1,790,586	+				+0.3
1,790,591	+				+0.4
1,790,604	-				-0.6
1,790,630	+				-2.1
1,790,638	-				-1.3
1,790,669	+				+0.3
1,790,676	+				+0.9
1,790,676	+				-0.2
1,790,719	+				-0.2
1,790,736	+				+1.3
1,790,737	+				-0.5
1,790,776	+				-0.1
1,790,804	-		CCNA_01668	0.11	+0.7
1,790,818	+		CCNA_01668	0.13	-0.1
1,790,841	-		CCNA_01668	0.16	+0.1
1,790,857	+		CCNA_01668	0.18	+2.0
1,790,859	+		CCNA_01668	0.18	-0.3
1,790,860	-		CCNA_01668	0.18	+1.6
1,790,867	-		CCNA_01668	0.19	-2.3
1,790,867	-		CCNA_01668	0.19	+0.2
1,790,867	-		CCNA_01668	0.19	-1.4
1,790,867	-		CCNA_01668	0.19	+0.4
1,790,889	+		CCNA_01668	0.21	-0.4
1,790,889	+		CCNA_01668	0.21	+0.5
1,790,927	+		CCNA_01668	0.26	+1.0
1,790,939	+		CCNA_01668	0.27	-0.1
1,790,947	-		CCNA_01668	0.28	-1.3
1,790,952	+		CCNA_01668	0.28	+0.0
1,790,995	+		CCNA_01668	0.33	-0.1
1,790,996	-		CCNA_01668	0.33	-0.6
1,790,997	-		CCNA_01668	0.34	+1.8
1,791,001	+		CCNA_01668	0.34	+0.4
1,791,050	-		CCNA_01668	0.40	-0.7
1,791,134	+		CCNA_01668	0.49	-0.0
1,791,160	+		CCNA_01668	0.52	+0.8
1,791,162	+		CCNA_01668	0.52	-0.1
1,791,168	-		CCNA_01668	0.53	+1.7
1,791,168	-		CCNA_01668	0.53	+0.9
1,791,168	-		CCNA_01668	0.53	-0.5
1,791,185	-		CCNA_01668	0.55	+0.9
1,791,215	-		CCNA_01668	0.59	-0.3
1,791,217	-		CCNA_01668	0.59	-0.5
1,791,217	-		CCNA_01668	0.59	+0.3
1,791,235	+		CCNA_01668	0.61	-0.5
1,791,286	-		CCNA_01668	0.67	+0.0
1,791,374	+		CCNA_01668	0.77	-0.6
1,791,374	+		CCNA_01668	0.77	-0.9