Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01594

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,714,067	-		CCNA_01593	0.58	+0.2
1,714,090	+		CCNA_01593	0.59	-0.7
1,714,090	+		CCNA_01593	0.59	+0.3
1,714,095	+		CCNA_01593	0.59	+0.2
1,714,098	-		CCNA_01593	0.59	-0.1
1,714,290	+		CCNA_01593	0.70	-1.0
1,714,290	+		CCNA_01593	0.70	-0.8
1,714,290	+		CCNA_01593	0.70	-0.5
1,714,290	+		CCNA_01593	0.70	+0.2
1,714,298	-		CCNA_01593	0.71	+0.3
1,714,310	-		CCNA_01593	0.71	-0.5
1,714,312	+		CCNA_01593	0.71	-1.6
1,714,343	+		CCNA_01593	0.73	-0.2
1,714,356	-		CCNA_01593	0.74	-0.3
1,714,365	+		CCNA_01593	0.74	+0.3
1,714,378	-		CCNA_01593	0.75	+0.1
1,714,400	+		CCNA_01593	0.76	-1.1
1,714,400	+		CCNA_01593	0.76	-0.8
1,714,400	+		CCNA_01593	0.76	-0.1
1,714,408	-		CCNA_01593	0.77	+1.0
1,714,432	+		CCNA_01593	0.78	-0.9
1,714,440	-		CCNA_01593	0.78	-0.0
1,714,460	+		CCNA_01593	0.79	-0.4
1,714,460	-		CCNA_01593	0.79	+0.7
1,714,463	-		CCNA_01593	0.80	-0.3
1,714,468	-		CCNA_01593	0.80	+0.4
1,714,505	+		CCNA_01593	0.82	-0.4
1,714,635	-		CCNA_01593	0.89	+0.5
1,714,673	-				+1.0
1,714,694	+				-0.5
1,714,753	-				-0.4
1,714,755	+				-0.2
1,714,791	-				-0.5
1,714,820	+				+0.6
1,714,841	-				-0.1
1,714,853	-				-1.4
1,714,853	-				+0.7
1,714,870	+				-1.1
1,714,887	+				-0.1
1,714,895	-				+1.5
1,714,895	-				-1.1
1,714,896	+				+0.5
1,714,910	+				+1.9
1,714,910	-				+0.9
1,714,949	+				-1.1
1,714,957	-				-0.7
1,714,976	-				+0.1
1,715,049	+				-1.2
1,715,091	+				-1.2
1,715,091	+				-0.8
1,715,130	+		CCNA_01594	0.11	+0.3
1,715,194	+		CCNA_01594	0.18	+0.2
1,715,197	-		CCNA_01594	0.19	-0.2
1,715,202	-		CCNA_01594	0.19	+0.2
1,715,207	-		CCNA_01594	0.20	+0.7
1,715,221	+		CCNA_01594	0.21	-0.2
1,715,229	-		CCNA_01594	0.22	+0.4
1,715,239	+		CCNA_01594	0.24	+0.4
1,715,244	+		CCNA_01594	0.24	+0.8
1,715,247	-		CCNA_01594	0.24	+0.4
1,715,291	-		CCNA_01594	0.30	+1.0
1,715,291	-		CCNA_01594	0.30	+1.4
1,715,305	+		CCNA_01594	0.31	+1.3
1,715,313	-		CCNA_01594	0.32	-0.3
1,715,353	+		CCNA_01594	0.37	+1.4
1,715,418	-		CCNA_01594	0.44	+0.2
1,715,426	-		CCNA_01594	0.45	-0.5
1,715,445	-		CCNA_01594	0.47	+0.5
1,715,496	+		CCNA_01594	0.53	+0.5
1,715,517	-		CCNA_01594	0.56	+0.5
1,715,662	+		CCNA_01594	0.72	-0.4
1,715,688	+		CCNA_01594	0.75	-0.0
1,715,688	+		CCNA_01594	0.75	+1.0
1,715,735	+		CCNA_01594	0.81	+0.5
1,715,765	+		CCNA_01594	0.84	+1.0
1,715,829	-				+0.2
1,715,842	+				-0.6
1,715,849	+				+0.3
1,715,869	+				-0.5
1,715,886	-				+1.2
1,715,893	-				-0.4
1,715,893	-				-0.4
1,715,949	+				+0.5
1,715,979	+				+0.5
1,715,983	-				-0.1
1,715,987	-				+0.4
1,715,987	-				-0.6
1,716,042	+		CCNA_01595	0.20	+0.3
1,716,099	+		CCNA_01595	0.32	-0.2
1,716,115	-		CCNA_01595	0.35	-1.3
1,716,133	+		CCNA_01595	0.39	+1.1
1,716,166	+		CCNA_01595	0.45	-0.2
1,716,246	+		CCNA_01595	0.62	-2.2
1,716,265	-		CCNA_01595	0.65	-1.1
1,716,307	-		CCNA_01595	0.74	-0.7
1,716,311	+		CCNA_01595	0.75	+1.8
1,716,312	-		CCNA_01595	0.75	+0.1
1,716,358	+		CCNA_01595	0.84	+0.5
1,716,358	+		CCNA_01595	0.84	-0.4
1,716,366	-		CCNA_01595	0.86	-0.1
1,716,366	-		CCNA_01595	0.86	+0.1
1,716,366	-		CCNA_01595	0.86	+0.2
1,716,375	-		CCNA_01595	0.88	+0.2
1,716,397	+				+1.1
1,716,398	+				+1.5
1,716,398	+				+0.1
1,716,398	+				-1.6
1,716,406	-				+0.3
1,716,408	+				+1.1
1,716,416	-				+1.1
1,716,416	-				+1.8
1,716,416	-				-0.2
1,716,448	-				-0.2
1,716,507	-				+0.3
1,716,567	+				+0.1
1,716,575	-				-0.9
1,716,575	-				-1.0
1,716,612	-				-0.7
1,716,667	-				+1.2
1,716,748	-		CCNA_01596	0.11	-0.2
1,716,815	-		CCNA_01596	0.14	+0.6
1,716,833	+		CCNA_01596	0.15	-0.4
1,716,892	-		CCNA_01596	0.17	-1.3