Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01573

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,688,773	+		CCNA_01571	0.21	+1.3
1,688,773	+		CCNA_01571	0.21	+0.3
1,688,781	-		CCNA_01571	0.23	+0.8
1,688,781	-		CCNA_01571	0.23	-0.4
1,688,781	-		CCNA_01571	0.23	+0.8
1,688,815	-		CCNA_01571	0.32	-1.0
1,688,846	+		CCNA_01571	0.39	+0.8
1,688,853	+		CCNA_01571	0.41	+1.6
1,688,885	-		CCNA_01571	0.49	-0.7
1,688,948	+		CCNA_01571	0.64	+1.8
1,688,995	+		CCNA_01571	0.75	+2.3
1,689,028	-		CCNA_01571	0.83	-0.5
1,689,033	+		CCNA_01571	0.84	+1.0
1,689,033	+		CCNA_01571	0.84	-0.8
1,689,041	-		CCNA_01571	0.86	+0.9
1,689,091	-				+1.5
1,689,211	+		CCNA_01572	0.17	-0.1
1,689,264	-		CCNA_01572	0.25	-0.6
1,689,286	+		CCNA_01572	0.28	+1.1
1,689,385	+		CCNA_01572	0.43	-0.6
1,689,388	-		CCNA_01572	0.44	-0.6
1,689,401	+		CCNA_01572	0.45	-0.4
1,689,401	+		CCNA_01572	0.45	+0.2
1,689,403	-		CCNA_01572	0.46	+0.6
1,689,453	-		CCNA_01572	0.53	-1.3
1,689,476	+		CCNA_01572	0.57	-0.5
1,689,484	-		CCNA_01572	0.58	+0.6
1,689,489	-		CCNA_01572	0.59	-1.0
1,689,494	+		CCNA_01572	0.59	-0.8
1,689,499	+		CCNA_01572	0.60	+1.3
1,689,504	+		CCNA_01572	0.61	+1.2
1,689,510	+		CCNA_01572	0.62	+1.3
1,689,512	-		CCNA_01572	0.62	-0.8
1,689,518	-		CCNA_01572	0.63	-0.7
1,689,522	+		CCNA_01572	0.63	-1.4
1,689,522	+		CCNA_01572	0.63	+1.1
1,689,548	-		CCNA_01572	0.67	-0.1
1,689,565	-		CCNA_01572	0.70	-0.7
1,689,565	-		CCNA_01572	0.70	+0.3
1,689,579	-		CCNA_01572	0.72	-0.6
1,689,584	-		CCNA_01572	0.73	+1.8
1,689,589	+		CCNA_01572	0.73	+0.3
1,689,603	-		CCNA_01572	0.75	+0.1
1,689,603	-		CCNA_01572	0.75	+0.8
1,689,604	+		CCNA_01572	0.76	-1.0
1,689,604	+		CCNA_01572	0.76	+0.2
1,689,612	-		CCNA_01572	0.77	-0.4
1,689,617	-		CCNA_01572	0.77	+2.1
1,689,637	-		CCNA_01572	0.80	+0.5
1,689,670	+		CCNA_01572	0.85	-1.0
1,689,721	+				-0.8
1,689,721	+				-1.4
1,689,727	-				-0.2
1,689,729	-				+0.2
1,689,796	+				+0.1
1,689,798	+				-1.8
1,689,808	+		CCNA_01573	0.12	+1.1
1,689,811	-		CCNA_01573	0.13	+0.3
1,689,828	-		CCNA_01573	0.18	+2.0
1,689,850	+		CCNA_01573	0.24	+0.3
1,689,933	+		CCNA_01573	0.47	+2.7
1,689,933	+		CCNA_01573	0.47	-0.1
1,689,938	+		CCNA_01573	0.49	-0.7
1,689,941	-		CCNA_01573	0.50	+0.5
1,689,943	+		CCNA_01573	0.50	+0.8
1,689,946	-		CCNA_01573	0.51	+0.4
1,689,946	-		CCNA_01573	0.51	+1.3
1,689,951	-		CCNA_01573	0.53	+0.1
1,689,976	+		CCNA_01573	0.60	-0.5
1,689,976	+		CCNA_01573	0.60	+0.5
1,689,984	-		CCNA_01573	0.62	-0.5
1,690,085	-				+0.2
1,690,087	+				-0.6
1,690,273	-		CCNA_01574	0.14	-1.1
1,690,283	-		CCNA_01574	0.15	+0.6
1,690,283	-		CCNA_01574	0.15	-0.4
1,690,344	+		CCNA_01574	0.23	+1.3
1,690,346	-		CCNA_01574	0.24	-0.2
1,690,374	-		CCNA_01574	0.27	+0.3
1,690,374	-		CCNA_01574	0.27	+0.3
1,690,389	-		CCNA_01574	0.29	-1.4
1,690,405	+		CCNA_01574	0.32	+3.1
1,690,423	-		CCNA_01574	0.34	+0.2
1,690,438	-		CCNA_01574	0.36	+0.1
1,690,463	+		CCNA_01574	0.39	-0.6
1,690,471	-		CCNA_01574	0.41	-0.6
1,690,471	-		CCNA_01574	0.41	-0.3
1,690,474	+		CCNA_01574	0.41	-0.1
1,690,474	+		CCNA_01574	0.41	+1.7
1,690,474	+		CCNA_01574	0.41	+0.9
1,690,492	-		CCNA_01574	0.43	-0.5
1,690,544	-		CCNA_01574	0.50	+0.1
1,690,551	+		CCNA_01574	0.51	+0.9
1,690,562	+		CCNA_01574	0.53	+0.0
1,690,562	+		CCNA_01574	0.53	-0.1
1,690,562	+		CCNA_01574	0.53	+0.8
1,690,562	+		CCNA_01574	0.53	+0.4
1,690,570	-		CCNA_01574	0.54	+0.1
1,690,594	-		CCNA_01574	0.57	+0.7
1,690,682	+		CCNA_01574	0.69	+0.5
1,690,774	+		CCNA_01574	0.82	+0.8
1,690,774	+		CCNA_01574	0.82	+0.3
1,690,849	+				-0.1
1,690,851	+				+1.8
1,690,857	-				+0.2
1,690,893	+				-0.2
1,690,913	+				+0.7
1,690,940	-				+1.0
1,690,950	-				+0.1
1,690,960	-				+0.9
1,690,960	-				+0.4
1,691,053	-				+1.1
1,691,112	+		CCNA_01575	0.12	-0.9