Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01530

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,636,852	-		CCNA_01528	0.60	+0.9
1,636,886	-		CCNA_01528	0.64	-0.8
1,636,924	-		CCNA_01528	0.69	-0.9
1,636,935	+		CCNA_01528	0.70	+0.7
1,636,940	+		CCNA_01528	0.71	+0.1
1,636,943	-		CCNA_01528	0.71	-1.5
1,636,972	+		CCNA_01528	0.75	+0.2
1,636,986	+		CCNA_01528	0.76	+0.6
1,636,986	+		CCNA_01528	0.76	+0.6
1,636,998	+		CCNA_01528	0.78	+0.5
1,636,998	+		CCNA_01528	0.78	+0.4
1,637,006	-		CCNA_01528	0.79	-0.6
1,637,006	-		CCNA_01528	0.79	-2.3
1,637,006	-		CCNA_01528	0.79	+2.3
1,637,006	-		CCNA_01528	0.79	+0.3
1,637,019	+		CCNA_01528	0.80	+0.4
1,637,019	+		CCNA_01528	0.80	+1.3
1,637,019	+		CCNA_01528	0.80	+0.6
1,637,019	+		CCNA_01528	0.80	+0.9
1,637,019	+		CCNA_01528	0.80	+0.5
1,637,029	+		CCNA_01528	0.82	+0.4
1,637,029	+		CCNA_01528	0.82	+0.9
1,637,037	-		CCNA_01528	0.82	-0.5
1,637,043	-		CCNA_01528	0.83	-0.3
1,637,048	-		CCNA_01528	0.84	-0.5
1,637,048	-		CCNA_01528	0.84	+0.6
1,637,088	-		CCNA_01528	0.89	-1.3
1,637,130	+				-0.0
1,637,155	-				-0.6
1,637,168	-				+0.2
1,637,193	+				+0.6
1,637,203	+				+0.2
1,637,252	+				+1.0
1,637,298	+				+0.6
1,637,338	-		CCNA_01529	0.12	+0.3
1,637,355	-		CCNA_01529	0.17	+2.5
1,637,357	+		CCNA_01529	0.17	+0.6
1,637,365	-		CCNA_01529	0.20	-0.2
1,637,369	-		CCNA_01529	0.21	-0.2
1,637,391	+		CCNA_01529	0.27	+0.3
1,637,405	+		CCNA_01529	0.30	+0.9
1,637,427	+		CCNA_01529	0.36	+0.7
1,637,438	+		CCNA_01529	0.39	-0.5
1,637,488	-		CCNA_01529	0.53	-0.2
1,637,533	-		CCNA_01529	0.65	-0.4
1,637,539	+		CCNA_01529	0.67	+0.6
1,637,547	-		CCNA_01529	0.69	-0.3
1,637,574	-		CCNA_01529	0.76	+0.4
1,637,618	+		CCNA_01529	0.88	-1.6
1,637,623	+		CCNA_01529	0.89	+0.8
1,637,631	-				-0.4
1,637,655	+				+1.1
1,637,656	+				+0.5
1,637,663	-				+1.4
1,637,663	-				+2.1
1,637,664	-				+0.3
1,637,696	-				-0.6
1,637,762	+				+0.5
1,637,874	-				-1.2
1,637,890	+				+0.4
1,637,897	-				-0.2
1,637,922	+				-0.5
1,637,951	-		CCNA_01530	0.13	+3.1
1,637,961	+		CCNA_01530	0.14	+0.6
1,637,961	+		CCNA_01530	0.14	+0.9
1,637,969	-		CCNA_01530	0.15	-0.8
1,637,969	-		CCNA_01530	0.15	-0.2
1,637,974	-		CCNA_01530	0.16	+0.0
1,637,974	-		CCNA_01530	0.16	-1.9
1,637,987	-		CCNA_01530	0.17	-0.5
1,638,009	+		CCNA_01530	0.20	+0.5
1,638,024	-		CCNA_01530	0.22	-0.5
1,638,038	-		CCNA_01530	0.24	-0.6
1,638,039	+		CCNA_01530	0.24	+0.1
1,638,043	-		CCNA_01530	0.24	-0.1
1,638,104	+		CCNA_01530	0.31	+0.6
1,638,104	+		CCNA_01530	0.31	-1.1
1,638,104	+		CCNA_01530	0.31	+0.1
1,638,104	+		CCNA_01530	0.31	-0.7
1,638,111	-		CCNA_01530	0.32	-0.4
1,638,133	-		CCNA_01530	0.35	+0.4
1,638,152	+		CCNA_01530	0.37	+1.9
1,638,152	+		CCNA_01530	0.37	+0.5
1,638,160	-		CCNA_01530	0.38	+0.9
1,638,185	+		CCNA_01530	0.41	+0.7
1,638,185	+		CCNA_01530	0.41	+0.7
1,638,185	+		CCNA_01530	0.41	+0.1
1,638,193	-		CCNA_01530	0.42	-2.2
1,638,195	-		CCNA_01530	0.42	+0.3
1,638,218	+		CCNA_01530	0.45	+0.2
1,638,224	-		CCNA_01530	0.46	+1.9
1,638,224	-		CCNA_01530	0.46	+0.7
1,638,227	-		CCNA_01530	0.46	+0.4
1,638,231	+		CCNA_01530	0.47	+0.4
1,638,239	-		CCNA_01530	0.48	-1.2
1,638,241	+		CCNA_01530	0.48	+0.4
1,638,249	-		CCNA_01530	0.49	+0.7
1,638,249	-		CCNA_01530	0.49	+2.7
1,638,273	+		CCNA_01530	0.52	+0.5
1,638,305	-		CCNA_01530	0.55	+0.7
1,638,310	+		CCNA_01530	0.56	-0.0
1,638,316	+		CCNA_01530	0.57	+0.8
1,638,332	-		CCNA_01530	0.59	-1.1
1,638,350	+		CCNA_01530	0.61	+0.4
1,638,358	+		CCNA_01530	0.62	+0.9
1,638,365	-		CCNA_01530	0.63	-0.7
1,638,384	+		CCNA_01530	0.65	+1.0
1,638,405	+		CCNA_01530	0.67	+1.2
1,638,429	-		CCNA_01530	0.70	-0.3
1,638,440	+		CCNA_01530	0.72	-0.2
1,638,444	-		CCNA_01530	0.72	+0.3
1,638,444	-		CCNA_01530	0.72	+0.1
1,638,470	+		CCNA_01530	0.75	-0.6
1,638,499	-		CCNA_01530	0.79	+0.1
1,638,578	+		CCNA_01530	0.88	-1.5
1,638,578	+		CCNA_01530	0.88	+0.5
1,638,578	+		CCNA_01530	0.88	+0.0
1,638,578	+		CCNA_01530	0.88	+1.1
1,638,586	-		CCNA_01530	0.89	+0.8
1,638,586	-		CCNA_01530	0.89	+0.8
1,638,586	-		CCNA_01530	0.89	+0.5
1,638,600	-				+0.9
1,638,606	-				+0.4
1,638,612	+				+0.1
1,638,642	+				+0.4
1,638,652	+				+0.5
1,638,656	+				-0.3
1,638,662	+				+0.3
1,638,662	+				+0.8
1,638,662	+				-0.2
1,638,670	-				-0.9
1,638,670	-				+1.1
1,638,670	-				-0.2
1,638,678	+				+0.3
1,638,680	-				-0.1
1,638,681	-				-2.0
1,638,686	-				-1.2
1,638,700	+				-1.5
1,638,708	-				+0.8
1,638,823	+		CCNA_01531	0.14	+0.1
1,638,868	+		CCNA_01531	0.23	-0.4
1,638,868	+		CCNA_01531	0.23	+0.1
1,638,878	-		CCNA_01531	0.24	-1.2
1,638,928	+		CCNA_01531	0.33	+0.4
1,638,930	+		CCNA_01531	0.34	+1.3
1,638,930	+		CCNA_01531	0.34	+0.6
1,638,971	-		CCNA_01531	0.41	+1.1
1,639,012	-		CCNA_01531	0.48	+0.1
1,639,037	+		CCNA_01531	0.53	+0.1
1,639,042	+		CCNA_01531	0.54	-1.5
1,639,042	+		CCNA_01531	0.54	+1.7
1,639,042	+		CCNA_01531	0.54	+0.6
1,639,045	-		CCNA_01531	0.54	+0.7
1,639,057	-		CCNA_01531	0.57	-2.7
1,639,065	+		CCNA_01531	0.58	+0.3
1,639,084	-		CCNA_01531	0.61	+0.0
1,639,089	-		CCNA_01531	0.62	-0.1
1,639,089	-		CCNA_01531	0.62	-0.0
1,639,107	-		CCNA_01531	0.66	-0.7
1,639,129	-		CCNA_01531	0.70	-1.5
1,639,129	-		CCNA_01531	0.70	-0.2
1,639,129	-		CCNA_01531	0.70	+0.9
1,639,173	+		CCNA_01531	0.77	+0.2
1,639,178	+		CCNA_01531	0.78	+0.4
1,639,178	+		CCNA_01531	0.78	+0.7
1,639,178	+		CCNA_01531	0.78	+0.8
1,639,186	-		CCNA_01531	0.80	-0.1
1,639,186	-		CCNA_01531	0.80	+1.7
1,639,186	-		CCNA_01531	0.80	+1.5
1,639,235	-		CCNA_01531	0.89	-1.1
1,639,236	+		CCNA_01531	0.89	+0.7
1,639,244	-				+0.5
1,639,270	+				+0.6
1,639,282	+				+0.1
1,639,282	+				+0.4
1,639,290	-				-1.1
1,639,290	-				-0.1
1,639,290	-				+0.1
1,639,336	+				+0.4
1,639,336	+				+0.7
1,639,344	-				-0.3
1,639,344	-				-0.9
1,639,345	-				+0.0
1,639,345	-				-1.9
1,639,363	+				+0.6
1,639,408	+				+1.3
1,639,408	+				+0.3
1,639,411	-				-0.7
1,639,423	+				+0.2
1,639,428	+				+0.3
1,639,431	-				+1.0
1,639,436	-				+0.6
1,639,441	-				-0.2
1,639,483	-				-0.5
1,639,516	-				+0.2
1,639,529	-				-2.8
1,639,538	+				-1.8
1,639,538	+				+0.5
1,639,566	-				-2.0
1,639,601	-				+2.6
1,639,644	-				+0.2
1,639,647	+				+0.9