Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01528

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,635,386	+		CCNA_01527	0.15	+0.2
1,635,386	+		CCNA_01527	0.15	+2.1
1,635,394	-		CCNA_01527	0.16	-1.8
1,635,394	-		CCNA_01527	0.16	-2.5
1,635,407	-		CCNA_01527	0.18	-0.1
1,635,424	-		CCNA_01527	0.20	-0.5
1,635,438	+		CCNA_01527	0.22	-0.8
1,635,438	+		CCNA_01527	0.22	+0.4
1,635,438	+		CCNA_01527	0.22	+0.4
1,635,446	-		CCNA_01527	0.23	-0.5
1,635,499	+		CCNA_01527	0.29	+0.2
1,635,507	-		CCNA_01527	0.30	-1.0
1,635,507	-		CCNA_01527	0.30	+0.2
1,635,509	-		CCNA_01527	0.30	-0.6
1,635,517	-		CCNA_01527	0.31	-1.4
1,635,524	+		CCNA_01527	0.32	+0.4
1,635,546	+		CCNA_01527	0.35	+1.0
1,635,547	-		CCNA_01527	0.35	+0.7
1,635,584	+		CCNA_01527	0.39	+0.9
1,635,600	-		CCNA_01527	0.41	-2.6
1,635,634	-		CCNA_01527	0.45	-0.5
1,635,634	-		CCNA_01527	0.45	-0.0
1,635,653	+		CCNA_01527	0.48	+0.0
1,635,653	+		CCNA_01527	0.48	+1.4
1,635,653	+		CCNA_01527	0.48	+0.6
1,635,660	+		CCNA_01527	0.49	+0.4
1,635,661	-		CCNA_01527	0.49	-1.7
1,635,680	-		CCNA_01527	0.51	+0.7
1,635,732	-		CCNA_01527	0.57	+0.9
1,635,738	+		CCNA_01527	0.58	-1.8
1,635,738	+		CCNA_01527	0.58	-0.7
1,635,746	-		CCNA_01527	0.59	-1.5
1,635,746	-		CCNA_01527	0.59	-0.5
1,635,746	-		CCNA_01527	0.59	-0.4
1,635,746	-		CCNA_01527	0.59	+0.3
1,635,885	+		CCNA_01527	0.76	-0.0
1,635,893	-		CCNA_01527	0.77	+0.4
1,635,897	+		CCNA_01527	0.77	+0.3
1,635,899	+		CCNA_01527	0.78	+0.5
1,635,899	-		CCNA_01527	0.78	+0.8
1,635,905	-		CCNA_01527	0.78	+0.8
1,635,905	-		CCNA_01527	0.78	+0.6
1,635,905	-		CCNA_01527	0.78	+0.1
1,635,918	+		CCNA_01527	0.80	-0.1
1,635,918	+		CCNA_01527	0.80	-0.1
1,635,926	-		CCNA_01527	0.81	-0.3
1,635,926	-		CCNA_01527	0.81	+0.3
1,635,926	-		CCNA_01527	0.81	+0.4
1,635,926	-		CCNA_01527	0.81	-2.0
1,635,936	-		CCNA_01527	0.82	+0.6
1,635,947	-		CCNA_01527	0.83	-0.2
1,635,968	+		CCNA_01527	0.86	+0.3
1,635,971	-		CCNA_01527	0.86	-0.5
1,635,994	-		CCNA_01527	0.89	-0.1
1,635,996	+		CCNA_01527	0.89	-0.1
1,636,010	+				+1.1
1,636,018	-				+0.5
1,636,070	+				+0.6
1,636,078	-				+0.7
1,636,078	-				-0.2
1,636,078	-				-2.2
1,636,078	-				-0.2
1,636,103	+				-0.2
1,636,103	+				-0.2
1,636,103	+				+0.6
1,636,111	-				-0.4
1,636,111	-				+0.1
1,636,111	-				-1.3
1,636,111	-				-0.4
1,636,111	-				-1.4
1,636,251	+				-0.2
1,636,259	-				+0.4
1,636,270	-				+0.7
1,636,275	-				+1.7
1,636,285	+				+0.4
1,636,362	+				+0.0
1,636,370	-				-0.1
1,636,418	-				+0.3
1,636,462	-		CCNA_01528	0.13	+0.1
1,636,521	-		CCNA_01528	0.20	+0.2
1,636,547	-		CCNA_01528	0.23	+0.4
1,636,685	+		CCNA_01528	0.40	+0.9
1,636,754	+		CCNA_01528	0.48	+0.9
1,636,754	+		CCNA_01528	0.48	+0.7
1,636,762	+		CCNA_01528	0.49	-1.6
1,636,808	-		CCNA_01528	0.55	-0.8
1,636,833	+		CCNA_01528	0.58	+1.5
1,636,852	-		CCNA_01528	0.60	+0.9
1,636,886	-		CCNA_01528	0.64	-0.8
1,636,924	-		CCNA_01528	0.69	-0.9
1,636,935	+		CCNA_01528	0.70	+0.7
1,636,940	+		CCNA_01528	0.71	+0.1
1,636,943	-		CCNA_01528	0.71	-1.5
1,636,972	+		CCNA_01528	0.75	+0.2
1,636,986	+		CCNA_01528	0.76	+0.6
1,636,986	+		CCNA_01528	0.76	+0.6
1,636,998	+		CCNA_01528	0.78	+0.5
1,636,998	+		CCNA_01528	0.78	+0.4
1,637,006	-		CCNA_01528	0.79	-0.6
1,637,006	-		CCNA_01528	0.79	-2.3
1,637,006	-		CCNA_01528	0.79	+2.3
1,637,006	-		CCNA_01528	0.79	+0.3
1,637,019	+		CCNA_01528	0.80	+0.4
1,637,019	+		CCNA_01528	0.80	+1.3
1,637,019	+		CCNA_01528	0.80	+0.6
1,637,019	+		CCNA_01528	0.80	+0.9
1,637,019	+		CCNA_01528	0.80	+0.5
1,637,029	+		CCNA_01528	0.82	+0.4
1,637,029	+		CCNA_01528	0.82	+0.9
1,637,037	-		CCNA_01528	0.82	-0.5
1,637,043	-		CCNA_01528	0.83	-0.3
1,637,048	-		CCNA_01528	0.84	-0.5
1,637,048	-		CCNA_01528	0.84	+0.6
1,637,088	-		CCNA_01528	0.89	-1.3
1,637,130	+				-0.0
1,637,155	-				-0.6
1,637,168	-				+0.2
1,637,193	+				+0.6
1,637,203	+				+0.2
1,637,252	+				+1.0
1,637,298	+				+0.6
1,637,338	-		CCNA_01529	0.12	+0.3
1,637,355	-		CCNA_01529	0.17	+2.5
1,637,357	+		CCNA_01529	0.17	+0.6
1,637,365	-		CCNA_01529	0.20	-0.2
1,637,369	-		CCNA_01529	0.21	-0.2
1,637,391	+		CCNA_01529	0.27	+0.3
1,637,405	+		CCNA_01529	0.30	+0.9
1,637,427	+		CCNA_01529	0.36	+0.7
1,637,438	+		CCNA_01529	0.39	-0.5
1,637,488	-		CCNA_01529	0.53	-0.2
1,637,533	-		CCNA_01529	0.65	-0.4
1,637,539	+		CCNA_01529	0.67	+0.6
1,637,547	-		CCNA_01529	0.69	-0.3
1,637,574	-		CCNA_01529	0.76	+0.4
1,637,618	+		CCNA_01529	0.88	-1.6
1,637,623	+		CCNA_01529	0.89	+0.8
1,637,631	-				-0.4
1,637,655	+				+1.1
1,637,656	+				+0.5
1,637,663	-				+1.4
1,637,663	-				+2.1
1,637,664	-				+0.3
1,637,696	-				-0.6
1,637,762	+				+0.5
1,637,874	-				-1.2
1,637,890	+				+0.4
1,637,897	-				-0.2
1,637,922	+				-0.5
1,637,951	-		CCNA_01530	0.13	+3.1
1,637,961	+		CCNA_01530	0.14	+0.6
1,637,961	+		CCNA_01530	0.14	+0.9
1,637,969	-		CCNA_01530	0.15	-0.8
1,637,969	-		CCNA_01530	0.15	-0.2
1,637,974	-		CCNA_01530	0.16	+0.0
1,637,974	-		CCNA_01530	0.16	-1.9
1,637,987	-		CCNA_01530	0.17	-0.5
1,638,009	+		CCNA_01530	0.20	+0.5
1,638,024	-		CCNA_01530	0.22	-0.5
1,638,038	-		CCNA_01530	0.24	-0.6
1,638,039	+		CCNA_01530	0.24	+0.1
1,638,043	-		CCNA_01530	0.24	-0.1
1,638,104	+		CCNA_01530	0.31	+0.6
1,638,104	+		CCNA_01530	0.31	-1.1
1,638,104	+		CCNA_01530	0.31	+0.1
1,638,104	+		CCNA_01530	0.31	-0.7
1,638,111	-		CCNA_01530	0.32	-0.4
1,638,133	-		CCNA_01530	0.35	+0.4
1,638,152	+		CCNA_01530	0.37	+1.9
1,638,152	+		CCNA_01530	0.37	+0.5
1,638,160	-		CCNA_01530	0.38	+0.9