Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01490

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,597,349	+		CCNA_01489	0.40	+0.5
1,597,351	+		CCNA_01489	0.40	-0.1
1,597,359	-		CCNA_01489	0.41	+1.2
1,597,367	-		CCNA_01489	0.41	+0.3
1,597,455	+		CCNA_01489	0.47	+1.1
1,597,458	-		CCNA_01489	0.47	+0.9
1,597,510	+		CCNA_01489	0.50	+1.3
1,597,510	+		CCNA_01489	0.50	-1.5
1,597,510	+		CCNA_01489	0.50	-1.8
1,597,518	-		CCNA_01489	0.51	-1.4
1,597,518	-		CCNA_01489	0.51	-1.7
1,597,528	-		CCNA_01489	0.52	+0.5
1,597,579	+		CCNA_01489	0.55	+1.2
1,597,600	-		CCNA_01489	0.56	+1.1
1,597,645	-		CCNA_01489	0.59	-0.3
1,597,645	-		CCNA_01489	0.59	+1.5
1,597,668	-		CCNA_01489	0.61	-0.9
1,597,671	+		CCNA_01489	0.61	-0.1
1,597,679	-		CCNA_01489	0.61	-1.4
1,597,712	-		CCNA_01489	0.63	-0.1
1,597,741	+		CCNA_01489	0.65	-0.2
1,597,780	-		CCNA_01489	0.68	+0.7
1,597,807	+		CCNA_01489	0.70	-0.5
1,597,834	+		CCNA_01489	0.71	+1.3
1,597,836	+		CCNA_01489	0.71	+0.7
1,597,872	-		CCNA_01489	0.74	+0.2
1,597,872	-		CCNA_01489	0.74	+0.5
1,597,902	-		CCNA_01489	0.76	-0.3
1,597,907	+		CCNA_01489	0.76	+0.7
1,597,923	-		CCNA_01489	0.77	+1.1
1,597,999	+		CCNA_01489	0.82	+1.3
1,598,063	+		CCNA_01489	0.86	-0.5
1,598,073	+		CCNA_01489	0.87	-0.7
1,598,087	-		CCNA_01489	0.88	-1.2
1,598,107	+		CCNA_01489	0.89	-0.1
1,598,115	-		CCNA_01489	0.89	-1.1
1,598,115	-		CCNA_01489	0.89	-1.8
1,598,132	-				+0.1
1,598,185	+				-0.4
1,598,300	+				-0.9
1,598,324	-				+0.0
1,598,407	+				+0.9
1,598,510	+				+1.1
1,598,526	+		CCNA_01490	0.11	-0.2
1,598,539	+		CCNA_01490	0.12	+0.3
1,598,558	+		CCNA_01490	0.13	+0.1
1,598,558	+		CCNA_01490	0.13	+0.1
1,598,558	+		CCNA_01490	0.13	+1.2
1,598,606	-		CCNA_01490	0.16	-2.1
1,598,659	+		CCNA_01490	0.19	+1.7
1,598,672	-		CCNA_01490	0.20	+0.5
1,598,676	-		CCNA_01490	0.20	+0.5
1,598,685	+		CCNA_01490	0.20	-0.7
1,598,707	+		CCNA_01490	0.22	-0.2
1,598,714	+		CCNA_01490	0.22	+0.6
1,598,715	-		CCNA_01490	0.22	+1.2
1,598,717	+		CCNA_01490	0.22	-0.9
1,598,772	+		CCNA_01490	0.26	+1.1
1,598,864	+		CCNA_01490	0.31	+1.0
1,598,864	+		CCNA_01490	0.31	+0.5
1,598,872	-		CCNA_01490	0.32	-0.1
1,598,887	+		CCNA_01490	0.33	+1.7
1,598,890	+		CCNA_01490	0.33	+0.5
1,598,915	+		CCNA_01490	0.34	+0.8
1,598,985	+		CCNA_01490	0.39	+0.6
1,599,013	-		CCNA_01490	0.40	-0.3
1,599,028	+		CCNA_01490	0.41	+0.8
1,599,046	-		CCNA_01490	0.42	-1.6
1,599,089	+		CCNA_01490	0.45	-0.1
1,599,096	+		CCNA_01490	0.46	+0.6
1,599,096	+		CCNA_01490	0.46	+1.9
1,599,096	+		CCNA_01490	0.46	+0.1
1,599,096	+		CCNA_01490	0.46	-0.1
1,599,104	-		CCNA_01490	0.46	+0.4
1,599,104	-		CCNA_01490	0.46	+0.7
1,599,106	+		CCNA_01490	0.46	+1.2
1,599,106	+		CCNA_01490	0.46	+0.4
1,599,160	-		CCNA_01490	0.49	-0.0
1,599,180	+		CCNA_01490	0.51	-0.3
1,599,181	-		CCNA_01490	0.51	-1.1
1,599,271	+		CCNA_01490	0.56	+0.4
1,599,288	+		CCNA_01490	0.57	+0.9
1,599,296	-		CCNA_01490	0.58	+0.3
1,599,305	-		CCNA_01490	0.58	-0.7
1,599,351	+		CCNA_01490	0.61	+1.4
1,599,351	+		CCNA_01490	0.61	-0.5
1,599,358	-		CCNA_01490	0.61	-0.2
1,599,359	-		CCNA_01490	0.62	-0.5
1,599,359	-		CCNA_01490	0.62	-2.9
1,599,359	-		CCNA_01490	0.62	-0.0
1,599,425	-		CCNA_01490	0.66	-0.4
1,599,511	+		CCNA_01490	0.71	+0.8
1,599,557	-		CCNA_01490	0.74	+2.4
1,599,623	+		CCNA_01490	0.78	+0.9
1,599,623	+		CCNA_01490	0.78	+0.4
1,599,662	+		CCNA_01490	0.80	+0.9
1,599,722	+		CCNA_01490	0.84	+0.7
1,599,760	+		CCNA_01490	0.86	-0.8
1,599,788	-		CCNA_01490	0.88	+0.0
1,599,791	+		CCNA_01490	0.88	+0.5
1,599,791	+		CCNA_01490	0.88	+0.4
1,599,882	+				+0.3
1,599,925	+				+2.1
1,599,933	-				-0.1
1,599,997	+				-0.2
1,600,005	-				-0.2
1,600,005	-				+0.6
1,600,045	+				+0.8
1,600,045	+				-0.8
1,600,053	-				+0.5
1,600,053	-				+0.2
1,600,072	-				+3.1
1,600,143	+		CCNA_01491	0.12	-0.8
1,600,151	-		CCNA_01491	0.13	-1.4
1,600,184	+		CCNA_01491	0.16	+0.6
1,600,192	-		CCNA_01491	0.17	-0.0
1,600,193	+		CCNA_01491	0.17	+1.7
1,600,257	-		CCNA_01491	0.22	-0.0
1,600,360	-		CCNA_01491	0.31	+0.2
1,600,375	+		CCNA_01491	0.32	-0.5
1,600,404	+		CCNA_01491	0.35	-0.9
1,600,406	+		CCNA_01491	0.35	-0.4
1,600,433	-		CCNA_01491	0.37	+1.3
1,600,435	+		CCNA_01491	0.38	+0.1
1,600,435	+		CCNA_01491	0.38	-0.6
1,600,435	+		CCNA_01491	0.38	-1.7
1,600,435	+		CCNA_01491	0.38	+0.5
1,600,443	-		CCNA_01491	0.38	+0.5
1,600,443	-		CCNA_01491	0.38	+0.7
1,600,491	+		CCNA_01491	0.42	+0.0
1,600,568	+		CCNA_01491	0.49	-0.3
1,600,568	+		CCNA_01491	0.49	-0.5
1,600,581	+		CCNA_01491	0.50	-0.6
1,600,611	-		CCNA_01491	0.53	-0.0
1,600,632	-		CCNA_01491	0.55	+0.2
1,600,681	+		CCNA_01491	0.59	+0.6
1,600,704	+		CCNA_01491	0.61	+0.4
1,600,738	-		CCNA_01491	0.64	+0.5
1,600,739	-		CCNA_01491	0.64	-0.3
1,600,756	+		CCNA_01491	0.65	+0.4
1,600,782	-		CCNA_01491	0.67	+0.3
1,600,787	-		CCNA_01491	0.68	+0.3
1,600,795	-		CCNA_01491	0.69	+0.8
1,600,795	-		CCNA_01491	0.69	+0.6
1,600,795	-		CCNA_01491	0.69	+0.3
1,600,795	-		CCNA_01491	0.69	-0.2
1,600,869	+		CCNA_01491	0.75	+0.8
1,600,888	+		CCNA_01491	0.77	-0.7
1,600,899	+		CCNA_01491	0.78	-1.3
1,600,907	-		CCNA_01491	0.78	-0.0
1,600,942	+		CCNA_01491	0.81	+0.7
1,600,944	-		CCNA_01491	0.81	+0.3
1,600,986	-		CCNA_01491	0.85	-0.2