Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01483

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,589,878	+		CCNA_01481	0.58	+0.9
1,589,878	+		CCNA_01481	0.58	+0.1
1,589,878	+		CCNA_01481	0.58	+0.7
1,589,878	+		CCNA_01481	0.58	+0.4
1,589,886	-		CCNA_01481	0.59	-0.5
1,589,886	-		CCNA_01481	0.59	-0.9
1,589,887	+		CCNA_01481	0.59	-0.4
1,589,909	-		CCNA_01481	0.60	+0.4
1,589,968	+		CCNA_01481	0.64	-0.0
1,589,996	-		CCNA_01481	0.65	-0.2
1,590,044	-		CCNA_01481	0.68	-0.6
1,590,053	+		CCNA_01481	0.68	+0.1
1,590,152	+		CCNA_01481	0.74	+0.2
1,590,152	+		CCNA_01481	0.74	-0.0
1,590,160	-		CCNA_01481	0.75	-0.9
1,590,160	-		CCNA_01481	0.75	-0.1
1,590,239	-		CCNA_01481	0.79	-0.0
1,590,314	+		CCNA_01481	0.83	+0.2
1,590,322	-		CCNA_01481	0.84	-1.3
1,590,322	-		CCNA_01481	0.84	-1.8
1,590,322	-		CCNA_01481	0.84	-1.8
1,590,324	+		CCNA_01481	0.84	+0.1
1,590,332	+		CCNA_01481	0.84	-0.3
1,590,332	+		CCNA_01481	0.84	-0.4
1,590,332	+		CCNA_01481	0.84	-0.6
1,590,332	-		CCNA_01481	0.84	+0.1
1,590,340	-		CCNA_01481	0.85	-0.7
1,590,340	-		CCNA_01481	0.85	+0.6
1,590,350	-		CCNA_01481	0.85	-1.0
1,590,356	+		CCNA_01481	0.86	-2.1
1,590,357	+		CCNA_01481	0.86	+0.6
1,590,367	+		CCNA_01481	0.86	-0.3
1,590,380	+		CCNA_01481	0.87	-0.3
1,590,406	+		CCNA_01481	0.89	+0.2
1,590,421	-		CCNA_01481	0.90	+0.0
1,590,424	+		CCNA_01481	0.90	-0.1
1,590,437	+				-0.0
1,590,445	-				+0.8
1,590,466	+				+0.5
1,590,468	-				-0.7
1,590,474	-				-0.6
1,590,527	+				+0.9
1,590,567	-				-0.1
1,590,583	+				+0.4
1,590,583	+				+0.4
1,590,583	+				+0.9
1,590,583	+				-0.0
1,590,591	-				-0.9
1,590,654	-				-1.3
1,590,663	+				+0.8
1,590,663	+				+2.2
1,590,671	-				-0.5
1,590,757	-				-0.1
1,590,758	-				-0.7
1,590,823	+				+0.2
1,590,930	+		CCNA_01483	0.28	+0.5
1,590,938	-		CCNA_01483	0.32	-1.5
1,590,958	-		CCNA_01483	0.41	-1.3
1,590,992	-		CCNA_01483	0.56	-0.7
1,591,023	+		CCNA_01483	0.70	-0.3
1,591,036	-		CCNA_01483	0.76	-2.3
1,591,089	+				+2.3
1,591,089	+				-1.3
1,591,089	-				-0.4
1,591,090	-				-0.7
1,591,099	+				+0.2
1,591,104	+				+0.7
1,591,104	+				-0.3
1,591,112	-				-0.4
1,591,112	-				-0.2
1,591,112	-				+0.6
1,591,112	-				+0.6
1,591,112	-				+0.6
1,591,117	-				-1.4
1,591,139	+				-0.2
1,591,144	-				+0.5
1,591,146	+				+0.0
1,591,199	-		CCNA_01484	0.21	-2.0
1,591,199	-		CCNA_01484	0.21	+2.2
1,591,259	+		CCNA_01484	0.35	+0.4
1,591,267	-		CCNA_01484	0.37	-0.8
1,591,291	+		CCNA_01484	0.43	+1.9
1,591,316	-		CCNA_01484	0.49	-1.7
1,591,352	+		CCNA_01484	0.57	+0.1
1,591,352	+		CCNA_01484	0.57	-1.2
1,591,360	-		CCNA_01484	0.59	-0.7
1,591,362	-		CCNA_01484	0.60	-0.4
1,591,367	-		CCNA_01484	0.61	-1.1
1,591,418	-		CCNA_01484	0.73	+0.5
1,591,418	-		CCNA_01484	0.73	-1.7
1,591,437	+		CCNA_01484	0.78	-2.0
1,591,442	+		CCNA_01484	0.79	-0.6
1,591,450	-		CCNA_01484	0.81	+0.5
1,591,467	-		CCNA_01484	0.85	-0.3
1,591,467	-		CCNA_01484	0.85	+0.3
1,591,491	+				-1.8
1,591,501	+				-0.9
1,591,520	-				-0.4
1,591,546	-				+2.8
1,591,583	+				-0.4
1,591,583	+				-2.0
1,591,590	+				-0.0
1,591,591	-				-0.0
1,591,687	+		CCNA_01485	0.13	+0.5
1,591,697	+		CCNA_01485	0.14	-0.2
1,591,697	+		CCNA_01485	0.14	+0.2
1,591,697	+		CCNA_01485	0.14	-1.0
1,591,697	+		CCNA_01485	0.14	-1.8
1,591,697	+		CCNA_01485	0.14	+1.8
1,591,705	-		CCNA_01485	0.15	+1.0
1,591,705	-		CCNA_01485	0.15	+1.0
1,591,705	-		CCNA_01485	0.15	+0.8
1,591,731	-		CCNA_01485	0.17	+0.1
1,591,773	-		CCNA_01485	0.21	-1.4
1,591,823	-		CCNA_01485	0.25	+0.7
1,591,827	+		CCNA_01485	0.26	-0.3
1,591,902	+		CCNA_01485	0.32	+0.4
1,591,930	-		CCNA_01485	0.35	+1.0
1,591,948	-		CCNA_01485	0.36	+0.2
1,591,953	-		CCNA_01485	0.37	+0.7
1,591,960	+		CCNA_01485	0.37	-0.5
1,591,970	+		CCNA_01485	0.38	-1.3
1,591,978	-		CCNA_01485	0.39	+0.0
1,591,978	-		CCNA_01485	0.39	+0.0
1,591,978	-		CCNA_01485	0.39	+0.6
1,592,007	+		CCNA_01485	0.41	-0.4
1,592,012	+		CCNA_01485	0.42	+1.3
1,592,040	+		CCNA_01485	0.44	-2.2
1,592,053	+		CCNA_01485	0.45	+0.2
1,592,055	+		CCNA_01485	0.46	-0.8
1,592,055	+		CCNA_01485	0.46	-0.7
1,592,055	+		CCNA_01485	0.46	+0.2
1,592,055	+		CCNA_01485	0.46	-1.2
1,592,061	-		CCNA_01485	0.46	-0.3
1,592,061	-		CCNA_01485	0.46	+0.7
1,592,063	-		CCNA_01485	0.46	-2.4
1,592,071	-		CCNA_01485	0.47	-0.6
1,592,078	+		CCNA_01485	0.48	+0.7
1,592,081	-		CCNA_01485	0.48	+0.1