Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01373

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,486,564	-		CCNA_01371	0.46	+0.5
1,486,574	+		CCNA_01371	0.50	+0.3
1,486,579	+		CCNA_01371	0.51	+0.2
1,486,705	-				+1.1
1,486,727	+				+0.3
1,486,891	-				-0.2
1,486,896	+		CCNA_01372	0.11	-0.2
1,486,926	-		CCNA_01372	0.16	-0.2
1,486,952	+		CCNA_01372	0.20	+0.7
1,486,960	-		CCNA_01372	0.21	+0.1
1,486,968	+		CCNA_01372	0.22	-0.4
1,486,976	-		CCNA_01372	0.24	+0.4
1,487,057	-		CCNA_01372	0.37	-0.0
1,487,107	+		CCNA_01372	0.45	-0.7
1,487,110	-		CCNA_01372	0.46	+0.4
1,487,131	-		CCNA_01372	0.49	-0.1
1,487,150	-		CCNA_01372	0.52	+0.5
1,487,200	-		CCNA_01372	0.61	-0.9
1,487,229	-		CCNA_01372	0.65	+0.4
1,487,233	+		CCNA_01372	0.66	+1.7
1,487,241	-		CCNA_01372	0.67	-0.3
1,487,246	+		CCNA_01372	0.68	+0.7
1,487,254	+		CCNA_01372	0.69	+0.8
1,487,314	+		CCNA_01372	0.79	-0.3
1,487,314	+		CCNA_01372	0.79	+0.8
1,487,382	+				+1.9
1,487,400	-				+0.2
1,487,419	-				+0.3
1,487,453	+				-0.8
1,487,461	-				-0.1
1,487,461	-				+1.5
1,487,461	-				+0.4
1,487,466	-				+0.0
1,487,466	-				-0.8
1,487,466	-				+0.4
1,487,466	-				+0.6
1,487,466	-				-0.2
1,487,466	-				-1.4
1,487,466	-				+0.7
1,487,492	-				+0.5
1,487,534	+				+1.0
1,487,548	+				-0.1
1,487,582	-				+0.4
1,487,582	-				+0.8
1,487,700	-		CCNA_01373	0.23	+0.4
1,487,706	-		CCNA_01373	0.24	-0.3
1,487,718	+		CCNA_01373	0.26	+0.8
1,487,758	+		CCNA_01373	0.30	+0.6
1,487,766	+		CCNA_01373	0.31	+1.0
1,487,766	+		CCNA_01373	0.31	+0.7
1,487,766	+		CCNA_01373	0.31	+0.8
1,487,774	-		CCNA_01373	0.32	+0.5
1,487,774	-		CCNA_01373	0.32	-0.1
1,487,774	-		CCNA_01373	0.32	+0.6
1,487,774	-		CCNA_01373	0.32	-0.0
1,487,779	-		CCNA_01373	0.33	-0.4
1,487,803	+		CCNA_01373	0.36	+0.8
1,487,803	+		CCNA_01373	0.36	+0.6
1,487,896	-		CCNA_01373	0.48	+0.7
1,487,923	+		CCNA_01373	0.51	+0.2
1,487,945	+		CCNA_01373	0.54	+0.7
1,488,141	-		CCNA_01373	0.78	-0.2
1,488,141	-		CCNA_01373	0.78	+0.5
1,488,142	+		CCNA_01373	0.78	+0.9
1,488,142	+		CCNA_01373	0.78	+0.9
1,488,195	+		CCNA_01373	0.85	+0.8
1,488,202	+		CCNA_01373	0.86	+0.8
1,488,202	+		CCNA_01373	0.86	+0.9
1,488,210	-		CCNA_01373	0.86	-0.1
1,488,210	-		CCNA_01373	0.86	-0.8
1,488,260	+				+0.8
1,488,260	+				+1.0
1,488,288	-				+0.8
1,488,299	+				+1.1
1,488,319	-				-0.3
1,488,321	+				-0.0
1,488,419	+				+0.1
1,488,500	+		CCNA_01374	0.13	+0.3
1,488,538	-		CCNA_01374	0.15	-1.4
1,488,542	+		CCNA_01374	0.15	-0.3
1,488,558	+		CCNA_01374	0.16	+0.6
1,488,566	-		CCNA_01374	0.17	+0.7
1,488,597	+		CCNA_01374	0.18	-0.3
1,488,687	+		CCNA_01374	0.23	-0.1
1,488,687	+		CCNA_01374	0.23	-1.5
1,488,687	+		CCNA_01374	0.23	+0.3
1,488,687	+		CCNA_01374	0.23	+0.3
1,488,687	+		CCNA_01374	0.23	+0.4
1,488,687	+		CCNA_01374	0.23	-0.7
1,488,687	+		CCNA_01374	0.23	-0.4
1,488,687	+		CCNA_01374	0.23	-1.1
1,488,695	-		CCNA_01374	0.23	-0.7
1,488,695	-		CCNA_01374	0.23	+0.2
1,488,695	-		CCNA_01374	0.23	+0.4
1,488,695	-		CCNA_01374	0.23	-2.1
1,488,695	-		CCNA_01374	0.23	-0.3
1,488,695	-		CCNA_01374	0.23	+1.1
1,488,695	-		CCNA_01374	0.23	-0.0
1,488,695	-		CCNA_01374	0.23	-1.4
1,488,695	-		CCNA_01374	0.23	+0.2
1,488,695	-		CCNA_01374	0.23	-0.8
1,488,712	-		CCNA_01374	0.24	+0.3
1,488,712	-		CCNA_01374	0.24	+0.1
1,488,712	-		CCNA_01374	0.24	-0.4
1,488,713	-		CCNA_01374	0.24	-0.3
1,488,828	+		CCNA_01374	0.30	+0.6
1,488,830	+		CCNA_01374	0.30	+0.9
1,488,856	+		CCNA_01374	0.32	-0.1
1,488,868	-		CCNA_01374	0.32	-2.1
1,488,871	+		CCNA_01374	0.32	+1.0
1,488,884	-		CCNA_01374	0.33	+0.0
1,488,887	+		CCNA_01374	0.33	+0.0
1,488,887	+		CCNA_01374	0.33	+2.4
1,488,889	-		CCNA_01374	0.33	+0.4
1,488,889	-		CCNA_01374	0.33	-1.0
1,488,889	-		CCNA_01374	0.33	-0.3
1,488,895	-		CCNA_01374	0.34	-0.9
1,488,909	+		CCNA_01374	0.34	-1.8
1,488,941	-		CCNA_01374	0.36	-1.1
1,488,941	-		CCNA_01374	0.36	+1.0
1,488,997	-		CCNA_01374	0.39	-0.7
1,488,999	+		CCNA_01374	0.39	-0.1
1,489,035	+		CCNA_01374	0.41	+0.3
1,489,035	+		CCNA_01374	0.41	+0.2
1,489,035	+		CCNA_01374	0.41	+2.5
1,489,035	+		CCNA_01374	0.41	-1.1
1,489,043	-		CCNA_01374	0.41	-0.3
1,489,066	+		CCNA_01374	0.42	-1.2
1,489,083	+		CCNA_01374	0.43	+0.7
1,489,111	+		CCNA_01374	0.45	+0.7
1,489,111	+		CCNA_01374	0.45	+0.4
1,489,111	+		CCNA_01374	0.45	-1.5
1,489,119	-		CCNA_01374	0.45	+0.2
1,489,119	-		CCNA_01374	0.45	-1.7
1,489,119	-		CCNA_01374	0.45	+1.5
1,489,119	-		CCNA_01374	0.45	-1.6
1,489,119	-		CCNA_01374	0.45	-0.1
1,489,121	+		CCNA_01374	0.45	+0.7
1,489,177	+		CCNA_01374	0.48	+0.0
1,489,183	+		CCNA_01374	0.48	-0.5
1,489,183	+		CCNA_01374	0.48	+0.5
1,489,183	+		CCNA_01374	0.48	-0.6
1,489,183	+		CCNA_01374	0.48	-0.4
1,489,190	-		CCNA_01374	0.49	-0.2
1,489,191	-		CCNA_01374	0.49	-0.5
1,489,196	-		CCNA_01374	0.49	+0.4
1,489,197	-		CCNA_01374	0.49	-0.6
1,489,283	+		CCNA_01374	0.54	+0.7