Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01371

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,485,448	+		CCNA_01369	0.64	+1.1
1,485,449	+		CCNA_01369	0.64	+0.7
1,485,456	-		CCNA_01369	0.65	+0.1
1,485,456	-		CCNA_01369	0.65	+0.2
1,485,480	-		CCNA_01369	0.67	-1.9
1,485,480	-		CCNA_01369	0.67	+0.2
1,485,487	+		CCNA_01369	0.68	+0.1
1,485,487	+		CCNA_01369	0.68	+1.1
1,485,490	-		CCNA_01369	0.68	+1.1
1,485,491	-		CCNA_01369	0.68	+0.2
1,485,492	+		CCNA_01369	0.68	+0.6
1,485,495	-		CCNA_01369	0.69	-0.2
1,485,495	-		CCNA_01369	0.69	-0.8
1,485,500	-		CCNA_01369	0.69	+0.1
1,485,539	-		CCNA_01369	0.72	-0.2
1,485,540	-		CCNA_01369	0.72	+0.2
1,485,540	-		CCNA_01369	0.72	+0.2
1,485,542	+		CCNA_01369	0.73	+0.5
1,485,550	-		CCNA_01369	0.73	-1.1
1,485,565	-		CCNA_01369	0.75	-2.7
1,485,598	-		CCNA_01369	0.78	+0.2
1,485,615	+		CCNA_01369	0.79	-1.2
1,485,640	+		CCNA_01369	0.81	+0.5
1,485,640	+		CCNA_01369	0.81	+0.2
1,485,648	-		CCNA_01369	0.82	-0.8
1,485,648	-		CCNA_01369	0.82	+3.0
1,485,707	+		CCNA_01369	0.87	-0.8
1,485,715	-		CCNA_01369	0.88	+0.2
1,485,785	+				+0.2
1,485,835	-				-0.3
1,485,848	+				+1.1
1,485,848	+				-0.2
1,485,934	+				-0.6
1,485,942	-				+1.2
1,485,942	-				+0.4
1,486,002	+				-1.0
1,486,006	+				-0.8
1,486,047	-				-0.4
1,486,090	-				+1.1
1,486,121	-				+0.3
1,486,152	+				+0.1
1,486,157	-				-0.5
1,486,177	-				+1.0
1,486,195	-				+0.1
1,486,207	+				+0.7
1,486,213	-				-1.6
1,486,215	-				-0.0
1,486,215	-				+1.1
1,486,229	-		CCNA_03948	0.14	-0.7
1,486,231	-		CCNA_03948	0.16	+0.5
1,486,254	-		CCNA_03948	0.33	-2.0
1,486,259	-		CCNA_03948	0.36	-1.5
1,486,264	-		CCNA_03948	0.40	-0.5
1,486,266	+		CCNA_03948	0.41	-0.1
1,486,274	-		CCNA_03948	0.47	-1.4
1,486,288	+		CCNA_03948	0.57	+0.3
1,486,310	+		CCNA_03948	0.73	+0.7
1,486,419	+				+0.5
1,486,440	+				-0.4
1,486,456	+		CCNA_01371	0.11	-0.3
1,486,463	+		CCNA_01371	0.14	+0.5
1,486,474	-		CCNA_01371	0.17	+1.3
1,486,564	-		CCNA_01371	0.46	+0.5
1,486,574	+		CCNA_01371	0.50	+0.3
1,486,579	+		CCNA_01371	0.51	+0.2
1,486,705	-				+1.1
1,486,727	+				+0.3
1,486,891	-				-0.2
1,486,896	+		CCNA_01372	0.11	-0.2
1,486,926	-		CCNA_01372	0.16	-0.2
1,486,952	+		CCNA_01372	0.20	+0.7
1,486,960	-		CCNA_01372	0.21	+0.1
1,486,968	+		CCNA_01372	0.22	-0.4
1,486,976	-		CCNA_01372	0.24	+0.4
1,487,057	-		CCNA_01372	0.37	-0.0
1,487,107	+		CCNA_01372	0.45	-0.7
1,487,110	-		CCNA_01372	0.46	+0.4
1,487,131	-		CCNA_01372	0.49	-0.1
1,487,150	-		CCNA_01372	0.52	+0.5
1,487,200	-		CCNA_01372	0.61	-0.9
1,487,229	-		CCNA_01372	0.65	+0.4
1,487,233	+		CCNA_01372	0.66	+1.7
1,487,241	-		CCNA_01372	0.67	-0.3
1,487,246	+		CCNA_01372	0.68	+0.7
1,487,254	+		CCNA_01372	0.69	+0.8
1,487,314	+		CCNA_01372	0.79	-0.3
1,487,314	+		CCNA_01372	0.79	+0.8
1,487,382	+				+1.9
1,487,400	-				+0.2
1,487,419	-				+0.3
1,487,453	+				-0.8
1,487,461	-				-0.1
1,487,461	-				+1.5
1,487,461	-				+0.4
1,487,466	-				+0.0
1,487,466	-				-0.8
1,487,466	-				+0.4
1,487,466	-				+0.6
1,487,466	-				-0.2
1,487,466	-				-1.4
1,487,466	-				+0.7
1,487,492	-				+0.5
1,487,534	+				+1.0
1,487,548	+				-0.1
1,487,582	-				+0.4
1,487,582	-				+0.8
1,487,700	-		CCNA_01373	0.23	+0.4
1,487,706	-		CCNA_01373	0.24	-0.3
1,487,718	+		CCNA_01373	0.26	+0.8