Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01356

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,469,370	+				-0.4
1,469,406	-				-0.0
1,469,413	+				-1.1
1,469,480	-		CCNA_01355	0.13	-1.3
1,469,549	+		CCNA_01355	0.21	+0.1
1,469,559	-		CCNA_01355	0.22	-1.9
1,469,603	+		CCNA_01355	0.27	+0.6
1,469,640	+		CCNA_01355	0.31	+0.6
1,469,640	+		CCNA_01355	0.31	+1.2
1,469,640	+		CCNA_01355	0.31	+0.1
1,469,640	+		CCNA_01355	0.31	-1.5
1,469,640	+		CCNA_01355	0.31	+0.3
1,469,650	+		CCNA_01355	0.32	-0.1
1,469,653	-		CCNA_01355	0.33	+0.0
1,469,658	-		CCNA_01355	0.33	-1.7
1,469,658	-		CCNA_01355	0.33	-1.2
1,469,658	-		CCNA_01355	0.33	+0.7
1,469,699	+		CCNA_01355	0.38	-0.2
1,469,707	-		CCNA_01355	0.39	-0.3
1,469,709	+		CCNA_01355	0.39	+0.2
1,469,745	-		CCNA_01355	0.43	-1.1
1,469,760	+		CCNA_01355	0.45	-0.2
1,469,760	+		CCNA_01355	0.45	-0.2
1,469,761	-		CCNA_01355	0.45	-1.4
1,469,901	+		CCNA_01355	0.61	+0.3
1,469,919	-		CCNA_01355	0.63	+0.7
1,469,920	-		CCNA_01355	0.63	-0.8
1,469,995	+		CCNA_01355	0.72	+0.1
1,470,010	-		CCNA_01355	0.74	-0.8
1,470,030	+		CCNA_01355	0.76	-0.1
1,470,047	+		CCNA_01355	0.78	+1.0
1,470,155	+				-1.2
1,470,155	-				-1.7
1,470,160	+				+0.2
1,470,160	+				+1.6
1,470,164	+				+1.1
1,470,165	+				-0.1
1,470,165	+				+1.0
1,470,173	-				-1.2
1,470,178	-				-0.7
1,470,260	-				+0.9
1,470,335	+				-0.5
1,470,380	-				-0.3
1,470,389	+				+0.0
1,470,389	+				+1.2
1,470,389	+				-0.8
1,470,397	-				+2.3
1,470,397	-				-0.4
1,470,397	-				-1.3
1,470,462	-				+0.8
1,470,544	+				+0.2
1,470,544	+				+0.1
1,470,552	-				-0.9
1,470,563	-		CCNA_01356	0.10	+0.4
1,470,563	-		CCNA_01356	0.10	+1.8
1,470,568	-		CCNA_01356	0.10	+0.1
1,470,585	-		CCNA_01356	0.11	-0.4
1,470,630	+		CCNA_01356	0.13	-1.1
1,470,638	-		CCNA_01356	0.14	-0.6
1,470,714	-		CCNA_01356	0.18	-0.6
1,470,714	-		CCNA_01356	0.18	-0.5
1,470,724	-		CCNA_01356	0.18	-3.2
1,470,728	+		CCNA_01356	0.19	-1.8
1,470,728	+		CCNA_01356	0.19	-1.7
1,470,753	+		CCNA_01356	0.20	+0.2
1,470,753	+		CCNA_01356	0.20	-0.1
1,470,763	+		CCNA_01356	0.20	+0.7
1,470,773	+		CCNA_01356	0.21	-0.2
1,470,778	+		CCNA_01356	0.21	-0.3
1,470,778	+		CCNA_01356	0.21	+0.2
1,470,778	+		CCNA_01356	0.21	-0.2
1,470,786	-		CCNA_01356	0.22	-2.9
1,470,786	-		CCNA_01356	0.22	-0.7
1,470,786	-		CCNA_01356	0.22	-1.7
1,470,799	-		CCNA_01356	0.22	+0.4
1,470,807	+		CCNA_01356	0.23	-0.6
1,470,807	+		CCNA_01356	0.23	-1.0
1,470,813	+		CCNA_01356	0.23	+1.4
1,470,827	+		CCNA_01356	0.24	+0.1
1,470,827	+		CCNA_01356	0.24	+0.4
1,470,890	+		CCNA_01356	0.27	-0.7
1,470,903	-		CCNA_01356	0.28	+0.6
1,470,974	-		CCNA_01356	0.31	-1.8
1,470,974	-		CCNA_01356	0.31	+1.0
1,470,976	+		CCNA_01356	0.31	-0.5
1,471,027	-		CCNA_01356	0.34	-0.3
1,471,068	+		CCNA_01356	0.36	-0.3
1,471,087	+		CCNA_01356	0.37	+1.4
1,471,087	-		CCNA_01356	0.37	-0.8
1,471,092	+		CCNA_01356	0.37	+0.2
1,471,103	-		CCNA_01356	0.38	-0.2
1,471,107	+		CCNA_01356	0.38	+0.9
1,471,152	+		CCNA_01356	0.41	-0.5
1,471,175	+		CCNA_01356	0.42	-1.1
1,471,183	-		CCNA_01356	0.42	-0.5
1,471,189	-		CCNA_01356	0.42	-0.0
1,471,193	+		CCNA_01356	0.43	+0.3
1,471,229	+		CCNA_01356	0.45	-0.3
1,471,261	+		CCNA_01356	0.46	-0.3
1,471,269	-		CCNA_01356	0.47	-2.1
1,471,282	+		CCNA_01356	0.47	-0.4
1,471,317	+		CCNA_01356	0.49	-0.8
1,471,319	+		CCNA_01356	0.49	+0.7
1,471,319	+		CCNA_01356	0.49	-0.4
1,471,319	+		CCNA_01356	0.49	-0.5
1,471,327	-		CCNA_01356	0.50	-1.2
1,471,327	-		CCNA_01356	0.50	+0.7
1,471,327	-		CCNA_01356	0.50	-0.5
1,471,327	-		CCNA_01356	0.50	-1.1
1,471,327	-		CCNA_01356	0.50	+1.2
1,471,327	-		CCNA_01356	0.50	+0.9
1,471,333	+		CCNA_01356	0.50	-0.8
1,471,368	-		CCNA_01356	0.52	-1.4
1,471,382	+		CCNA_01356	0.52	-1.8
1,471,414	-		CCNA_01356	0.54	+0.0
1,471,453	-		CCNA_01356	0.56	+0.9
1,471,488	+		CCNA_01356	0.58	+0.4
1,471,503	-		CCNA_01356	0.59	-2.5
1,471,528	-		CCNA_01356	0.60	-1.1
1,471,535	-		CCNA_01356	0.60	-1.2
1,471,547	-		CCNA_01356	0.61	+1.0
1,471,552	+		CCNA_01356	0.61	+0.7
1,471,552	+		CCNA_01356	0.61	-1.1
1,471,560	-		CCNA_01356	0.62	-1.1
1,471,640	-		CCNA_01356	0.66	-0.3
1,471,659	-		CCNA_01356	0.67	-1.1
1,471,700	-		CCNA_01356	0.69	-0.8
1,471,700	-		CCNA_01356	0.69	-0.6
1,471,707	-		CCNA_01356	0.69	-0.8
1,471,709	-		CCNA_01356	0.69	+1.7
1,471,751	+		CCNA_01356	0.72	+0.5
1,471,758	-		CCNA_01356	0.72	-1.0
1,471,788	+		CCNA_01356	0.74	-2.4
1,471,831	+		CCNA_01356	0.76	-0.3
1,471,865	+		CCNA_01356	0.78	+0.9
1,471,873	-		CCNA_01356	0.78	-0.2
1,471,873	-		CCNA_01356	0.78	+1.3
1,471,888	+		CCNA_01356	0.79	-0.4
1,471,922	-		CCNA_01356	0.80	-1.7
1,471,922	-		CCNA_01356	0.80	-1.4
1,471,927	-		CCNA_01356	0.81	+0.7
1,471,944	+		CCNA_01356	0.82	+1.0
1,471,951	+		CCNA_01356	0.82	-0.7
1,471,952	-		CCNA_01356	0.82	-0.7
1,471,952	-		CCNA_01356	0.82	-0.7
1,471,972	-		CCNA_01356	0.83	-1.4
1,471,987	-		CCNA_01356	0.84	-0.8
1,472,065	-		CCNA_01356	0.88	-1.1
1,472,105	+		CCNA_01356	0.90	+0.4
1,472,105	+		CCNA_01356	0.90	+0.4
1,472,113	-				-1.5
1,472,123	-				+1.0
1,472,124	+				+1.2
1,472,132	-				+0.8
1,472,197	-				-1.5
1,472,238	+				-0.4
1,472,238	+				+0.7
1,472,245	+				-0.3
1,472,246	-				+0.9
1,472,287	-				-0.7
1,472,303	+				+0.3
1,472,351	+				+0.1
1,472,356	+				+0.7
1,472,359	-				+0.3
1,472,389	-				-1.7
1,472,389	-				-1.2
1,472,398	+				-0.9
1,472,416	-				-0.8
1,472,416	-				+1.4
1,472,427	+				+0.4
1,472,427	-				+0.0
1,472,440	-				-0.7
1,472,444	+				-0.8
1,472,444	+				+0.0
1,472,462	-				+0.6
1,472,492	+		CCNA_01357	0.10	+0.1
1,472,499	+		CCNA_01357	0.11	-0.1
1,472,521	-		CCNA_01357	0.12	+0.1
1,472,533	+		CCNA_01357	0.13	-0.3
1,472,555	-		CCNA_01357	0.14	+0.4
1,472,596	-		CCNA_01357	0.16	+2.3
1,472,614	-		CCNA_01357	0.17	+0.1
1,472,619	-		CCNA_01357	0.17	-1.4
1,472,671	+		CCNA_01357	0.20	+1.4
1,472,678	-		CCNA_01357	0.20	-1.0
1,472,701	-		CCNA_01357	0.22	-0.1
1,472,782	+		CCNA_01357	0.26	+0.8
1,472,785	+		CCNA_01357	0.26	+1.0
1,472,867	+		CCNA_01357	0.31	-0.2
1,472,887	-		CCNA_01357	0.32	-1.0
1,472,887	-		CCNA_01357	0.32	+0.2
1,472,922	-		CCNA_01357	0.34	-1.4
1,472,922	-		CCNA_01357	0.34	-0.8
1,472,923	+		CCNA_01357	0.34	+1.1
1,472,982	-		CCNA_01357	0.37	+1.4
1,472,996	+		CCNA_01357	0.38	+0.4
1,473,002	-		CCNA_01357	0.38	-0.5
1,473,017	+		CCNA_01357	0.39	-0.5
1,473,027	-		CCNA_01357	0.39	-1.7
1,473,099	+		CCNA_01357	0.43	+0.2
1,473,109	+		CCNA_01357	0.44	+0.2
1,473,109	+		CCNA_01357	0.44	-0.3
1,473,122	+		CCNA_01357	0.45	+1.3
1,473,123	+		CCNA_01357	0.45	-0.4
1,473,131	-		CCNA_01357	0.45	-0.9
1,473,193	+		CCNA_01357	0.48	+0.4
1,473,220	-		CCNA_01357	0.50	-2.2
1,473,255	-		CCNA_01357	0.52	-1.7
1,473,267	+		CCNA_01357	0.52	-1.0
1,473,277	+		CCNA_01357	0.53	+1.0
1,473,285	-		CCNA_01357	0.53	-1.6
1,473,285	-		CCNA_01357	0.53	+0.0
1,473,285	-		CCNA_01357	0.53	-1.6
1,473,285	-		CCNA_01357	0.53	-1.5