Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01211

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,336,842	-				-2.1
1,336,859	+				+0.2
1,336,880	+				-2.3
1,336,888	-				-3.2
1,336,897	+				-3.1
1,336,905	-				-0.6
1,336,905	-				-0.9
1,336,941	+		CCNA_01210	0.10	-4.2
1,336,942	-		CCNA_01210	0.10	-2.7
1,337,028	-		CCNA_01210	0.22	-1.2
1,337,032	+		CCNA_01210	0.22	-2.2
1,337,055	+		CCNA_01210	0.25	-1.9
1,337,090	-		CCNA_01210	0.30	-0.5
1,337,101	+		CCNA_01210	0.31	-0.3
1,337,103	+		CCNA_01210	0.31	-2.6
1,337,103	+		CCNA_01210	0.31	+0.6
1,337,103	+		CCNA_01210	0.31	-0.0
1,337,103	+		CCNA_01210	0.31	-1.2
1,337,111	-		CCNA_01210	0.32	-1.8
1,337,111	-		CCNA_01210	0.32	-3.0
1,337,195	+		CCNA_01210	0.43	+0.2
1,337,240	-		CCNA_01210	0.49	-2.4
1,337,308	-		CCNA_01210	0.58	+1.0
1,337,315	-		CCNA_01210	0.59	-0.2
1,337,354	-		CCNA_01210	0.64	-1.5
1,337,396	+		CCNA_01210	0.70	-1.3
1,337,396	-		CCNA_01210	0.70	-2.4
1,337,423	+		CCNA_01210	0.73	-3.3
1,337,431	-		CCNA_01210	0.74	-1.3
1,337,452	+		CCNA_01210	0.77	-1.9
1,337,452	+		CCNA_01210	0.77	-2.8
1,337,460	-		CCNA_01210	0.78	-3.4
1,337,530	+		CCNA_01210	0.87	-1.7
1,337,538	-		CCNA_01210	0.88	-2.7
1,337,538	-		CCNA_01210	0.88	-1.6
1,337,538	-		CCNA_01210	0.88	-1.0
1,337,545	+		CCNA_01210	0.89	-1.2
1,337,577	-				-1.2
1,337,610	+				+1.2
1,337,610	-				-1.2
1,337,626	+				+0.2
1,337,642	+				+0.2
1,337,642	+				+1.6
1,337,707	+				+1.3
1,337,905	+		CCNA_01211	0.13	-1.9
1,337,905	-		CCNA_01211	0.13	-0.6
1,337,923	+		CCNA_01211	0.16	-2.1
1,337,941	+		CCNA_01211	0.18	+0.2
1,337,945	+		CCNA_01211	0.18	+0.4
1,337,985	+		CCNA_01211	0.23	-0.3
1,338,010	+		CCNA_01211	0.25	-0.3
1,338,149	-		CCNA_01211	0.41	-2.2
1,338,225	-		CCNA_01211	0.50	-0.3
1,338,229	-		CCNA_01211	0.50	+0.2
1,338,230	-		CCNA_01211	0.51	-1.3
1,338,230	-		CCNA_01211	0.51	-0.2
1,338,249	-		CCNA_01211	0.53	-0.9
1,338,344	-		CCNA_01211	0.64	-1.9
1,338,349	-		CCNA_01211	0.64	+0.4
1,338,370	+		CCNA_01211	0.67	-0.2
1,338,479	-		CCNA_01211	0.79	-2.0
1,338,503	-		CCNA_01211	0.82	-1.1
1,338,559	+		CCNA_01211	0.88	-0.9
1,338,582	-				+0.1
1,338,594	+				-1.0
1,338,594	+				-3.7
1,338,602	-				-2.1
1,338,602	-				-1.4
1,338,602	-				-2.6
1,338,602	-				-2.0
1,338,602	-				-2.8
1,338,602	-				-3.6
1,338,632	+				-3.0
1,338,641	-				-1.8
1,338,678	+				-2.3
1,338,728	-		CCNA_01212	0.14	-1.8
1,338,805	-		CCNA_01212	0.21	-3.7
1,338,812	-		CCNA_01212	0.21	-1.8
1,338,899	+		CCNA_01212	0.29	-3.7
1,339,058	+		CCNA_01212	0.43	-0.6
1,339,066	-		CCNA_01212	0.43	-1.2
1,339,066	-		CCNA_01212	0.43	-2.1
1,339,066	-		CCNA_01212	0.43	-2.9
1,339,066	-		CCNA_01212	0.43	-1.6
1,339,067	+		CCNA_01212	0.43	-0.1
1,339,087	+		CCNA_01212	0.45	-2.3
1,339,095	-		CCNA_01212	0.46	-3.4
1,339,095	-		CCNA_01212	0.46	-3.1
1,339,097	+		CCNA_01212	0.46	-2.5
1,339,105	-		CCNA_01212	0.47	-2.8
1,339,110	+		CCNA_01212	0.47	-3.1
1,339,118	-		CCNA_01212	0.48	-1.9
1,339,118	-		CCNA_01212	0.48	-3.1
1,339,131	+		CCNA_01212	0.49	+0.1
1,339,131	+		CCNA_01212	0.49	-3.2
1,339,190	+		CCNA_01212	0.54	+0.1
1,339,197	-		CCNA_01212	0.55	-3.7
1,339,197	-		CCNA_01212	0.55	-2.7
1,339,198	-		CCNA_01212	0.55	-3.6
1,339,203	+		CCNA_01212	0.55	-3.5
1,339,203	+		CCNA_01212	0.55	-3.0
1,339,203	+		CCNA_01212	0.55	-3.0
1,339,211	-		CCNA_01212	0.56	-1.5
1,339,232	+		CCNA_01212	0.58	-1.1
1,339,236	-		CCNA_01212	0.58	-2.9
1,339,241	-		CCNA_01212	0.58	-3.0
1,339,241	-		CCNA_01212	0.58	-3.3
1,339,272	-		CCNA_01212	0.61	-3.0
1,339,325	-		CCNA_01212	0.66	-1.1
1,339,353	-		CCNA_01212	0.68	-5.8
1,339,364	+		CCNA_01212	0.69	-0.7
1,339,364	+		CCNA_01212	0.69	-3.5
1,339,372	-		CCNA_01212	0.70	-1.3
1,339,382	-		CCNA_01212	0.71	-0.0
1,339,394	-		CCNA_01212	0.72	-3.1
1,339,396	-		CCNA_01212	0.72	-1.8
1,339,435	-		CCNA_01212	0.75	-2.7
1,339,457	-		CCNA_01212	0.77	-2.6
1,339,462	+		CCNA_01212	0.78	-3.8
1,339,490	-		CCNA_01212	0.80	-2.2
1,339,555	+		CCNA_01212	0.86	-1.2
1,339,608	-				-1.2
1,339,610	+				-2.2
1,339,653	+				-2.8
1,339,661	-				-1.0