Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01195

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,317,185	-		CCNA_01194	0.69	-0.1
1,317,195	+		CCNA_01194	0.69	-0.6
1,317,204	-		CCNA_01194	0.69	-0.7
1,317,210	-		CCNA_01194	0.70	-0.4
1,317,253	+		CCNA_01194	0.71	-0.3
1,317,253	+		CCNA_01194	0.71	+1.7
1,317,261	-		CCNA_01194	0.72	-0.4
1,317,261	-		CCNA_01194	0.72	+1.0
1,317,261	-		CCNA_01194	0.72	-0.9
1,317,261	-		CCNA_01194	0.72	+0.2
1,317,261	-		CCNA_01194	0.72	-0.2
1,317,280	+		CCNA_01194	0.73	-1.8
1,317,309	-		CCNA_01194	0.74	+1.2
1,317,341	+		CCNA_01194	0.75	-1.7
1,317,351	-		CCNA_01194	0.75	+0.5
1,317,356	-		CCNA_01194	0.76	-1.6
1,317,366	+		CCNA_01194	0.76	+2.0
1,317,372	+		CCNA_01194	0.76	-0.7
1,317,377	+		CCNA_01194	0.76	-0.0
1,317,381	+		CCNA_01194	0.77	-0.2
1,317,400	+		CCNA_01194	0.77	-0.3
1,317,400	+		CCNA_01194	0.77	-1.9
1,317,408	-		CCNA_01194	0.78	-0.0
1,317,408	-		CCNA_01194	0.78	-0.1
1,317,424	+		CCNA_01194	0.78	-0.0
1,317,432	-		CCNA_01194	0.79	+0.4
1,317,494	-		CCNA_01194	0.81	+0.7
1,317,494	-		CCNA_01194	0.81	-2.1
1,317,536	-		CCNA_01194	0.83	+0.2
1,317,536	-		CCNA_01194	0.83	-0.3
1,317,536	-		CCNA_01194	0.83	-1.7
1,317,557	-		CCNA_01194	0.84	-1.2
1,317,621	-		CCNA_01194	0.86	+1.1
1,317,638	-		CCNA_01194	0.87	-0.1
1,317,742	+				-0.7
1,317,749	-				+0.1
1,317,752	+				-1.3
1,317,789	-				-0.9
1,317,873	+				-0.0
1,317,929	-				-0.6
1,317,948	+				-1.2
1,317,948	+				-0.3
1,317,948	+				-0.1
1,318,055	-				+0.8
1,318,108	-				+1.3
1,318,111	-				+0.9
1,318,150	+				+2.5
1,318,153	-				+0.6
1,318,158	-				+0.6
1,318,184	+				+0.3
1,318,225	+		CCNA_01195	0.12	-0.2
1,318,233	-		CCNA_01195	0.13	+0.8
1,318,233	-		CCNA_01195	0.13	+0.3
1,318,242	+		CCNA_01195	0.13	+0.8
1,318,248	-		CCNA_01195	0.14	+0.1
1,318,323	+		CCNA_01195	0.21	+0.7
1,318,346	+		CCNA_01195	0.24	+0.1
1,318,346	+		CCNA_01195	0.24	-0.1
1,318,346	+		CCNA_01195	0.24	-1.1
1,318,346	+		CCNA_01195	0.24	+2.6
1,318,346	+		CCNA_01195	0.24	-0.3
1,318,349	-		CCNA_01195	0.24	-0.3
1,318,354	-		CCNA_01195	0.24	+1.1
1,318,354	-		CCNA_01195	0.24	-0.4
1,318,354	-		CCNA_01195	0.24	+0.5
1,318,354	-		CCNA_01195	0.24	-1.0
1,318,354	-		CCNA_01195	0.24	+0.3
1,318,354	-		CCNA_01195	0.24	+0.3
1,318,415	-		CCNA_01195	0.30	-0.8
1,318,456	-		CCNA_01195	0.34	-0.9
1,318,469	-		CCNA_01195	0.36	+0.8
1,318,492	-		CCNA_01195	0.38	+0.1
1,318,496	-		CCNA_01195	0.38	+1.6
1,318,516	-		CCNA_01195	0.40	+1.1
1,318,516	-		CCNA_01195	0.40	+1.4
1,318,516	-		CCNA_01195	0.40	-0.0
1,318,516	-		CCNA_01195	0.40	+1.4
1,318,565	-		CCNA_01195	0.45	-0.1
1,318,565	-		CCNA_01195	0.45	+1.1
1,318,567	+		CCNA_01195	0.45	+0.8
1,318,575	-		CCNA_01195	0.46	+1.7
1,318,575	-		CCNA_01195	0.46	-0.0
1,318,580	-		CCNA_01195	0.46	-2.3
1,318,694	-		CCNA_01195	0.58	+0.1
1,318,756	-		CCNA_01195	0.64	+0.7
1,318,757	+		CCNA_01195	0.64	+0.3
1,318,802	+		CCNA_01195	0.68	+0.2
1,318,802	+		CCNA_01195	0.68	-0.6
1,318,810	-		CCNA_01195	0.69	-0.5
1,318,867	+		CCNA_01195	0.74	+1.1
1,318,877	+		CCNA_01195	0.75	-1.2
1,318,938	+		CCNA_01195	0.81	-0.9
1,318,938	+		CCNA_01195	0.81	+0.0
1,318,972	+		CCNA_01195	0.85	-0.9
1,319,031	-				+0.6
1,319,114	-				-0.5
1,319,153	+				+0.3
1,319,167	-				-0.4
1,319,174	-				-1.3
1,319,196	+				-0.6
1,319,200	-				-1.6
1,319,212	+				+0.7
1,319,212	-				+0.3
1,319,220	-				-1.9
1,319,252	+				+0.2
1,319,260	+				+0.6
1,319,268	-				+0.8
1,319,292	-				-0.2
1,319,294	+				+0.5
1,319,300	+				-0.1
1,319,305	+				-0.0
1,319,305	+				+0.3
1,319,308	-				+0.3
1,319,350	-				-0.7
1,319,350	-				-1.2
1,319,418	+				-0.1
1,319,423	+				+0.2
1,319,442	+				+1.0
1,319,490	-		CCNA_01196	0.11	+0.3
1,319,498	-		CCNA_01196	0.12	+0.9
1,319,508	+		CCNA_01196	0.12	-0.2
1,319,546	-		CCNA_01196	0.14	-0.5
1,319,577	+		CCNA_01196	0.16	+0.3
1,319,623	-		CCNA_01196	0.18	+0.8
1,319,686	-		CCNA_01196	0.21	-0.8
1,319,727	+		CCNA_01196	0.23	-0.7
1,319,729	-		CCNA_01196	0.23	-0.8
1,319,755	+		CCNA_01196	0.25	-0.7
1,319,813	+		CCNA_01196	0.27	+0.3
1,319,813	+		CCNA_01196	0.27	-0.5
1,319,821	-		CCNA_01196	0.28	-0.4
1,319,885	+		CCNA_01196	0.31	+0.3
1,319,916	+		CCNA_01196	0.33	+0.1
1,320,004	+		CCNA_01196	0.37	-0.7
1,320,004	+		CCNA_01196	0.37	+0.2
1,320,009	+		CCNA_01196	0.37	-0.4
1,320,104	-		CCNA_01196	0.42	+1.8