Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01184

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,302,676	+				+0.1
1,302,676	+				+0.2
1,302,676	+				-0.9
1,302,676	+				+1.2
1,302,676	+				+0.1
1,302,684	-				+0.5
1,302,684	-				-0.2
1,302,684	-				+0.1
1,302,684	-				-0.4
1,302,684	-				-0.2
1,302,721	-		CCNA_01183	0.11	-0.3
1,302,805	+		CCNA_01183	0.19	+0.7
1,302,829	-		CCNA_01183	0.22	+1.0
1,302,834	+		CCNA_01183	0.22	+0.3
1,302,846	+		CCNA_01183	0.23	+0.5
1,302,866	-		CCNA_01183	0.25	-0.1
1,302,896	+		CCNA_01183	0.28	+0.2
1,302,935	+		CCNA_01183	0.32	+0.2
1,302,935	+		CCNA_01183	0.32	+1.5
1,302,935	+		CCNA_01183	0.32	+0.7
1,302,937	+		CCNA_01183	0.32	+0.6
1,302,937	+		CCNA_01183	0.32	-1.3
1,302,943	-		CCNA_01183	0.33	+0.1
1,302,945	-		CCNA_01183	0.33	-0.0
1,302,945	-		CCNA_01183	0.33	-0.4
1,302,945	-		CCNA_01183	0.33	+2.0
1,302,945	-		CCNA_01183	0.33	-2.0
1,302,970	-		CCNA_01183	0.35	-0.0
1,302,970	-		CCNA_01183	0.35	+0.2
1,302,986	+		CCNA_01183	0.37	+0.1
1,302,986	+		CCNA_01183	0.37	+0.3
1,302,991	+		CCNA_01183	0.38	+0.3
1,302,999	-		CCNA_01183	0.38	-0.6
1,303,025	+		CCNA_01183	0.41	+1.2
1,303,031	+		CCNA_01183	0.41	+0.1
1,303,083	+		CCNA_01183	0.46	-0.3
1,303,099	+		CCNA_01183	0.48	+0.7
1,303,099	+		CCNA_01183	0.48	-1.3
1,303,099	+		CCNA_01183	0.48	-0.2
1,303,099	+		CCNA_01183	0.48	+0.3
1,303,099	+		CCNA_01183	0.48	+0.9
1,303,107	-		CCNA_01183	0.49	+0.2
1,303,107	-		CCNA_01183	0.49	-1.6
1,303,119	+		CCNA_01183	0.50	+0.2
1,303,130	-		CCNA_01183	0.51	-0.1
1,303,157	+		CCNA_01183	0.54	+0.6
1,303,189	+		CCNA_01183	0.57	-0.1
1,303,197	-		CCNA_01183	0.58	-0.3
1,303,214	-		CCNA_01183	0.59	-0.4
1,303,237	+		CCNA_01183	0.61	-0.0
1,303,237	+		CCNA_01183	0.61	+0.5
1,303,245	-		CCNA_01183	0.62	-1.6
1,303,261	-		CCNA_01183	0.64	-0.7
1,303,278	-		CCNA_01183	0.65	-0.3
1,303,285	+		CCNA_01183	0.66	+0.4
1,303,285	+		CCNA_01183	0.66	+0.6
1,303,288	-		CCNA_01183	0.66	-0.9
1,303,325	-		CCNA_01183	0.70	-1.1
1,303,355	+		CCNA_01183	0.73	+0.3
1,303,397	-		CCNA_01183	0.77	-2.2
1,303,415	-		CCNA_01183	0.79	-0.2
1,303,477	-		CCNA_01183	0.85	-0.1
1,303,522	+		CCNA_01183	0.89	+0.0
1,303,580	+				+0.6
1,303,580	+				+0.6
1,303,580	+				-0.6
1,303,605	-				-0.2
1,303,627	+				+1.0
1,303,640	-				-2.1
1,303,640	-				-1.3
1,303,640	-				+0.4
1,303,676	-				+1.4
1,303,681	-				-1.0
1,303,687	+		CCNA_01184	0.10	-0.7
1,303,702	+		CCNA_01184	0.14	+0.5
1,303,707	+		CCNA_01184	0.15	+1.0
1,303,712	+		CCNA_01184	0.16	-0.2
1,303,717	+		CCNA_01184	0.17	+0.4
1,303,725	-		CCNA_01184	0.19	+0.4
1,303,730	-		CCNA_01184	0.20	+1.0
1,303,731	+		CCNA_01184	0.20	+1.1
1,303,731	+		CCNA_01184	0.20	+0.6
1,303,750	-		CCNA_01184	0.24	-1.5
1,303,768	+		CCNA_01184	0.28	-0.0
1,303,823	+		CCNA_01184	0.41	+1.1
1,303,910	+		CCNA_01184	0.60	-0.9
1,303,928	-		CCNA_01184	0.64	-0.2
1,303,952	+		CCNA_01184	0.70	+0.2
1,303,973	+		CCNA_01184	0.74	+0.7
1,303,973	+		CCNA_01184	0.74	+1.6
1,303,979	+		CCNA_01184	0.76	+1.0
1,303,979	-		CCNA_01184	0.76	-0.0
1,303,980	+		CCNA_01184	0.76	+0.2
1,303,998	-		CCNA_01184	0.80	-0.4
1,304,005	+		CCNA_01184	0.81	+0.0
1,304,005	+		CCNA_01184	0.81	+0.1
1,304,008	-		CCNA_01184	0.82	+0.8
1,304,008	-		CCNA_01184	0.82	-0.4
1,304,008	-		CCNA_01184	0.82	-0.2
1,304,013	-		CCNA_01184	0.83	+1.1
1,304,036	+		CCNA_01184	0.88	+0.6
1,304,036	+		CCNA_01184	0.88	+0.6
1,304,047	-				-1.4
1,304,059	-				-1.1
1,304,059	-				+1.3
1,304,107	+				+1.7
1,304,115	-				+0.2
1,304,136	+		CCNA_01185	0.12	+0.2
1,304,137	+		CCNA_01185	0.13	+0.8
1,304,144	-		CCNA_01185	0.15	-0.7
1,304,144	-		CCNA_01185	0.15	-1.2
1,304,145	-		CCNA_01185	0.15	-0.3
1,304,171	+		CCNA_01185	0.22	+0.5
1,304,194	+		CCNA_01185	0.29	-0.3
1,304,202	-		CCNA_01185	0.31	-0.4
1,304,227	-		CCNA_01185	0.38	-0.7
1,304,229	+		CCNA_01185	0.39	-1.3
1,304,229	+		CCNA_01185	0.39	+0.3
1,304,229	+		CCNA_01185	0.39	-1.7
1,304,229	+		CCNA_01185	0.39	-1.2
1,304,237	-		CCNA_01185	0.41	-1.8
1,304,253	+		CCNA_01185	0.46	+0.3
1,304,272	+		CCNA_01185	0.51	+0.4
1,304,327	-		CCNA_01185	0.67	-2.0
1,304,327	-		CCNA_01185	0.67	-2.7
1,304,367	+		CCNA_01185	0.78	+0.1
1,304,394	+		CCNA_01185	0.86	+0.4
1,304,399	+		CCNA_01185	0.87	-1.0
1,304,399	+		CCNA_01185	0.87	-0.8
1,304,406	-		CCNA_01185	0.89	-0.5
1,304,407	-		CCNA_01185	0.89	-0.8
1,304,412	-				+0.2
1,304,497	-				+0.4
1,304,527	-				+2.0
1,304,586	-				-0.6
1,304,661	-				+0.7
1,304,765	+		CCNA_01186	0.19	+0.3
1,304,773	-		CCNA_01186	0.22	-1.9
1,304,832	+		CCNA_01186	0.41	+0.6
1,304,842	+		CCNA_01186	0.44	+0.6
1,304,850	-		CCNA_01186	0.46	-1.9
1,304,850	-		CCNA_01186	0.46	-2.0
1,304,850	-		CCNA_01186	0.46	-3.1
1,304,854	+		CCNA_01186	0.48	+0.4
1,304,876	+		CCNA_01186	0.55	+0.4
1,304,884	+		CCNA_01186	0.57	+0.4
1,304,899	+		CCNA_01186	0.62	-0.1
1,305,078	+				-0.7