Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01138

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,239,946	+		CCNA_01136	0.61	+0.6
1,239,974	-		CCNA_01136	0.64	-1.1
1,239,976	+		CCNA_01136	0.65	-0.5
1,239,976	+		CCNA_01136	0.65	-1.2
1,239,976	+		CCNA_01136	0.65	+0.6
1,239,976	+		CCNA_01136	0.65	-1.5
1,239,976	+		CCNA_01136	0.65	-1.6
1,239,984	-		CCNA_01136	0.66	+0.1
1,239,984	-		CCNA_01136	0.66	+0.9
1,239,984	-		CCNA_01136	0.66	-0.4
1,239,984	-		CCNA_01136	0.66	+0.9
1,239,984	-		CCNA_01136	0.66	+0.1
1,239,984	-		CCNA_01136	0.66	-0.7
1,239,984	-		CCNA_01136	0.66	-0.3
1,240,000	-		CCNA_01136	0.67	-1.3
1,240,000	-		CCNA_01136	0.67	-1.4
1,240,058	+		CCNA_01136	0.74	-0.6
1,240,084	+		CCNA_01136	0.77	-1.5
1,240,123	-		CCNA_01136	0.81	-1.0
1,240,138	-		CCNA_01136	0.83	-0.1
1,240,145	+		CCNA_01136	0.84	-0.6
1,240,145	+		CCNA_01136	0.84	-1.2
1,240,153	-		CCNA_01136	0.85	-0.0
1,240,194	+		CCNA_01136	0.89	-1.0
1,240,203	-				+0.5
1,240,203	-				-1.0
1,240,218	-				-0.8
1,240,249	+				+1.6
1,240,262	+				+0.1
1,240,262	-				-0.1
1,240,272	-				+0.6
1,240,342	+				-1.5
1,240,374	+				-0.7
1,240,467	+		CCNA_01137	0.23	-0.1
1,240,475	+		CCNA_01137	0.25	+0.1
1,240,503	+		CCNA_01137	0.30	-0.1
1,240,506	-		CCNA_01137	0.30	+0.1
1,240,536	+		CCNA_01137	0.36	+0.3
1,240,538	-		CCNA_01137	0.37	-1.3
1,240,544	-		CCNA_01137	0.38	-1.1
1,240,569	+		CCNA_01137	0.43	-0.5
1,240,570	-		CCNA_01137	0.43	-0.1
1,240,598	+		CCNA_01137	0.48	+0.4
1,240,659	+		CCNA_01137	0.60	-1.0
1,240,659	+		CCNA_01137	0.60	-0.3
1,240,700	-		CCNA_01137	0.68	-0.5
1,240,749	-		CCNA_01137	0.77	+0.9
1,240,763	+		CCNA_01137	0.80	+2.2
1,240,796	+		CCNA_01137	0.86	+0.0
1,240,833	+				+0.5
1,240,853	+				-1.1
1,240,856	-				-0.4
1,240,861	-				-0.4
1,240,861	-				+0.1
1,240,864	+				-1.0
1,240,907	+				-0.3
1,240,911	-				+1.1
1,240,915	-				-0.2
1,240,942	-				-0.5
1,240,946	+				-0.6
1,241,050	-		CCNA_01138	0.30	-0.0
1,241,069	-		CCNA_01138	0.35	-0.1
1,241,074	-		CCNA_01138	0.36	-0.1
1,241,086	+		CCNA_01138	0.39	-0.7
1,241,095	-		CCNA_01138	0.42	-2.7
1,241,125	-		CCNA_01138	0.50	+0.9
1,241,147	+		CCNA_01138	0.56	+0.8
1,241,155	-		CCNA_01138	0.58	-0.1
1,241,175	-		CCNA_01138	0.63	+0.3
1,241,204	+		CCNA_01138	0.71	+0.8
1,241,210	-		CCNA_01138	0.72	-0.6
1,241,225	+		CCNA_01138	0.76	-0.0
1,241,231	-		CCNA_01138	0.78	+2.2
1,241,233	+		CCNA_01138	0.78	-0.7
1,241,233	+		CCNA_01138	0.78	-0.8
1,241,253	+		CCNA_01138	0.84	-0.7
1,241,311	-				+0.4
1,241,316	-				-0.2
1,241,381	+				-0.1
1,241,382	+				-0.0
1,241,383	-				+0.6
1,241,408	+				-0.5
1,241,476	-				-0.1
1,241,487	+				+1.2
1,241,501	-				-0.9
1,241,517	+				+0.3
1,241,522	+				+0.2
1,241,529	+				+0.2
1,241,530	-				-1.5
1,241,530	-				-0.1
1,241,534	+				+0.3
1,241,552	-				-0.6
1,241,615	-		CCNA_01139	0.11	-0.0
1,241,618	+		CCNA_01139	0.11	+0.1
1,241,618	+		CCNA_01139	0.11	+0.1
1,241,620	-		CCNA_01139	0.11	+2.0
1,241,626	-		CCNA_01139	0.11	-0.0
1,241,626	-		CCNA_01139	0.11	+0.9
1,241,633	-		CCNA_01139	0.12	-1.1
1,241,633	-		CCNA_01139	0.12	-1.1
1,241,659	+		CCNA_01139	0.13	-0.5
1,241,704	+		CCNA_01139	0.16	+0.1
1,241,726	+		CCNA_01139	0.17	+0.3
1,241,726	+		CCNA_01139	0.17	+1.0
1,241,739	+		CCNA_01139	0.18	+0.4
1,241,832	+		CCNA_01139	0.23	+0.2
1,241,883	+		CCNA_01139	0.25	+1.0
1,241,891	-		CCNA_01139	0.26	-0.2
1,241,928	-		CCNA_01139	0.28	-0.6
1,241,986	-		CCNA_01139	0.31	-1.3
1,241,992	-		CCNA_01139	0.31	-2.0
1,241,992	-		CCNA_01139	0.31	+0.7
1,242,036	+		CCNA_01139	0.34	-0.0
1,242,049	-		CCNA_01139	0.35	-0.3
1,242,078	+		CCNA_01139	0.36	-0.5
1,242,110	+		CCNA_01139	0.38	+1.0
1,242,154	-		CCNA_01139	0.40	+0.6
1,242,169	-		CCNA_01139	0.41	+1.0
1,242,177	+		CCNA_01139	0.42	+0.2
1,242,193	-		CCNA_01139	0.42	+0.3
1,242,198	+		CCNA_01139	0.43	+0.0
1,242,200	+		CCNA_01139	0.43	+0.9
1,242,200	+		CCNA_01139	0.43	+0.5
1,242,200	+		CCNA_01139	0.43	+0.1
1,242,204	-		CCNA_01139	0.43	-0.8
1,242,208	-		CCNA_01139	0.43	+0.2
1,242,245	-		CCNA_01139	0.45	+0.4
1,242,256	-		CCNA_01139	0.46	-0.5
1,242,274	-		CCNA_01139	0.47	-1.4