Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01057

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,156,581	+		CCNA_01056	0.32	-0.2
1,156,589	-		CCNA_01056	0.33	+1.2
1,156,725	-		CCNA_01056	0.43	+0.2
1,156,735	+		CCNA_01056	0.44	-0.6
1,156,763	-		CCNA_01056	0.46	+0.5
1,156,784	+		CCNA_01056	0.48	-1.2
1,156,807	+		CCNA_01056	0.50	-0.4
1,156,807	+		CCNA_01056	0.50	+0.3
1,156,896	+		CCNA_01056	0.56	+0.7
1,157,007	-		CCNA_01056	0.65	-1.7
1,157,023	-		CCNA_01056	0.66	+0.7
1,157,040	+		CCNA_01056	0.67	+1.3
1,157,087	-		CCNA_01056	0.71	-1.2
1,157,101	+		CCNA_01056	0.72	+0.6
1,157,126	+		CCNA_01056	0.74	-1.2
1,157,139	-		CCNA_01056	0.75	-0.1
1,157,165	+		CCNA_01056	0.77	-1.0
1,157,226	+		CCNA_01056	0.82	-1.1
1,157,260	+		CCNA_01056	0.84	+0.1
1,157,263	-		CCNA_01056	0.84	+0.6
1,157,446	+				+0.3
1,157,446	+				-0.1
1,157,470	+				+0.6
1,157,518	+				+0.1
1,157,557	-				+0.5
1,157,660	+				+0.3
1,157,670	+				-0.9
1,157,763	-		CCNA_01057	0.14	+0.5
1,157,810	+		CCNA_01057	0.17	+0.3
1,157,818	-		CCNA_01057	0.18	+0.3
1,157,940	+		CCNA_01057	0.26	-0.6
1,157,950	-		CCNA_01057	0.27	+0.6
1,157,952	-		CCNA_01057	0.27	+0.5
1,158,024	-		CCNA_01057	0.32	+0.5
1,158,073	+		CCNA_01057	0.35	-0.8
1,158,095	-		CCNA_01057	0.36	+0.6
1,158,123	+		CCNA_01057	0.38	-0.2
1,158,131	-		CCNA_01057	0.39	+0.6
1,158,135	-		CCNA_01057	0.39	+0.2
1,158,136	-		CCNA_01057	0.39	+0.5
1,158,159	+		CCNA_01057	0.41	-0.4
1,158,192	-		CCNA_01057	0.43	+0.8
1,158,206	-		CCNA_01057	0.44	+0.4
1,158,221	+		CCNA_01057	0.45	+1.4
1,158,221	+		CCNA_01057	0.45	-2.8
1,158,229	-		CCNA_01057	0.45	+0.6
1,158,229	-		CCNA_01057	0.45	+0.6
1,158,244	-		CCNA_01057	0.46	+1.0
1,158,385	+		CCNA_01057	0.56	-1.2
1,158,385	+		CCNA_01057	0.56	-2.9
1,158,385	+		CCNA_01057	0.56	+0.1
1,158,393	-		CCNA_01057	0.56	+0.5
1,158,393	-		CCNA_01057	0.56	+0.3
1,158,414	+		CCNA_01057	0.58	-2.7
1,158,417	-		CCNA_01057	0.58	+0.4
1,158,513	+		CCNA_01057	0.64	+0.8
1,158,513	+		CCNA_01057	0.64	+1.0
1,158,513	+		CCNA_01057	0.64	-0.1
1,158,521	-		CCNA_01057	0.65	+0.3
1,158,521	-		CCNA_01057	0.65	-0.0
1,158,563	+		CCNA_01057	0.68	-0.6
1,158,576	-		CCNA_01057	0.68	+0.8
1,158,578	+		CCNA_01057	0.69	+1.0
1,158,599	+		CCNA_01057	0.70	-0.5
1,158,604	+		CCNA_01057	0.70	+1.3
1,158,612	-		CCNA_01057	0.71	-0.0
1,158,612	-		CCNA_01057	0.71	+0.5
1,158,697	-		CCNA_01057	0.77	+0.0
1,158,765	+		CCNA_01057	0.81	-1.0
1,158,773	-		CCNA_01057	0.82	-0.2
1,158,773	-		CCNA_01057	0.82	+0.8
1,158,889	-		CCNA_01057	0.89	+0.6
1,158,934	+				+0.0
1,158,934	+				-0.2
1,158,934	+				+0.9
1,158,942	-				-0.3
1,158,942	-				+0.4
1,158,953	+				+0.5
1,159,093	-				+0.4
1,159,150	-				+0.3
1,159,173	-		CCNA_01058	0.14	-0.1
1,159,204	-		CCNA_01058	0.25	-0.1
1,159,218	-		CCNA_01058	0.29	+0.2
1,159,219	-		CCNA_01058	0.30	+1.4
1,159,274	-		CCNA_01058	0.48	+1.1
1,159,297	-		CCNA_01058	0.56	+0.5
1,159,307	-		CCNA_01058	0.59	+0.8
1,159,362	-		CCNA_01058	0.77	-0.5
1,159,362	-		CCNA_01058	0.77	+0.1
1,159,393	+		CCNA_01058	0.88	+0.9
1,159,429	+				-1.5
1,159,437	-				+0.5
1,159,462	-				+0.1
1,159,462	-				+0.2
1,159,462	-				+0.6
1,159,483	+				-0.0
1,159,557	+				+0.6
1,159,697	-				-0.4
1,159,698	+				+0.4
1,159,713	+				+0.9
1,159,723	+				+1.0
1,159,823	+				+0.9
1,159,823	+				+0.7
1,159,823	+				+1.0
1,159,828	+				+0.8
1,159,841	+				+0.8
1,159,841	+				+1.0
1,159,841	+				+0.9
1,159,841	+				+1.1
1,159,841	+				+0.8
1,159,841	+				+1.0
1,159,901	+				+0.6
1,159,921	+				+0.6
1,159,921	+				+0.5
1,159,955	+				+0.7