Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01031

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,118,736	+				-0.4
1,118,744	-				+0.3
1,118,749	-				+0.2
1,118,767	-				+1.2
1,118,805	-				+0.1
1,118,839	+				+0.5
1,118,846	+				-0.1
1,118,882	+				+0.2
1,118,890	-				-0.1
1,118,890	-				+0.0
1,118,890	-				+0.5
1,118,900	-				+0.2
1,118,900	-				+0.5
1,118,908	-				+0.9
1,118,933	-				+0.4
1,118,994	+		CCNA_01030	0.18	-0.5
1,118,995	+		CCNA_01030	0.18	-0.1
1,118,995	+		CCNA_01030	0.18	-1.0
1,118,995	+		CCNA_01030	0.18	-1.2
1,118,995	+		CCNA_01030	0.18	-0.3
1,119,003	-		CCNA_01030	0.19	-0.8
1,119,003	-		CCNA_01030	0.19	+0.9
1,119,016	+		CCNA_01030	0.21	+0.4
1,119,022	-		CCNA_01030	0.22	+0.1
1,119,024	+		CCNA_01030	0.23	-1.9
1,119,026	+		CCNA_01030	0.23	-0.5
1,119,031	+		CCNA_01030	0.24	-0.2
1,119,031	+		CCNA_01030	0.24	-0.8
1,119,031	+		CCNA_01030	0.24	-0.9
1,119,031	+		CCNA_01030	0.24	+2.9
1,119,031	+		CCNA_01030	0.24	-0.1
1,119,031	+		CCNA_01030	0.24	-0.5
1,119,031	+		CCNA_01030	0.24	-0.0
1,119,031	+		CCNA_01030	0.24	-0.0
1,119,031	+		CCNA_01030	0.24	-0.5
1,119,031	+		CCNA_01030	0.24	-1.4
1,119,031	+		CCNA_01030	0.24	+0.4
1,119,031	+		CCNA_01030	0.24	-0.5
1,119,031	+		CCNA_01030	0.24	-0.5
1,119,031	+		CCNA_01030	0.24	-0.1
1,119,034	-		CCNA_01030	0.24	-1.0
1,119,034	-		CCNA_01030	0.24	+0.9
1,119,039	-		CCNA_01030	0.25	+0.3
1,119,039	-		CCNA_01030	0.25	+0.7
1,119,039	-		CCNA_01030	0.25	+1.3
1,119,039	-		CCNA_01030	0.25	-0.5
1,119,039	-		CCNA_01030	0.25	+0.5
1,119,039	-		CCNA_01030	0.25	-0.4
1,119,039	-		CCNA_01030	0.25	-0.7
1,119,039	-		CCNA_01030	0.25	+0.3
1,119,039	-		CCNA_01030	0.25	+0.7
1,119,039	-		CCNA_01030	0.25	-0.2
1,119,039	-		CCNA_01030	0.25	-0.5
1,119,039	-		CCNA_01030	0.25	+0.0
1,119,049	-		CCNA_01030	0.27	-0.3
1,119,068	+		CCNA_01030	0.30	-0.1
1,119,068	+		CCNA_01030	0.30	-1.2
1,119,068	+		CCNA_01030	0.30	-0.2
1,119,068	+		CCNA_01030	0.30	-0.7
1,119,073	+		CCNA_01030	0.31	-1.8
1,119,081	-		CCNA_01030	0.32	+0.1
1,119,083	-		CCNA_01030	0.32	-1.1
1,119,083	-		CCNA_01030	0.32	-0.4
1,119,115	+		CCNA_01030	0.37	-0.6
1,119,149	+		CCNA_01030	0.43	+0.1
1,119,164	-		CCNA_01030	0.45	-0.3
1,119,215	+		CCNA_01030	0.54	+0.2
1,119,223	-		CCNA_01030	0.55	+1.0
1,119,223	-		CCNA_01030	0.55	-0.7
1,119,223	-		CCNA_01030	0.55	+0.8
1,119,226	+		CCNA_01030	0.55	-0.4
1,119,226	+		CCNA_01030	0.55	+1.1
1,119,232	+		CCNA_01030	0.56	+0.4
1,119,234	-		CCNA_01030	0.57	-0.4
1,119,254	+		CCNA_01030	0.60	-0.4
1,119,254	+		CCNA_01030	0.60	+0.6
1,119,262	-		CCNA_01030	0.61	-0.1
1,119,272	+		CCNA_01030	0.63	+0.3
1,119,496	+				+0.6
1,119,525	-				+1.0
1,119,626	-				-1.0
1,119,633	+				-0.5
1,119,633	+				-1.7
1,119,633	+				+0.9
1,119,665	+				-0.9
1,119,676	+				-0.3
1,119,684	-				+0.3
1,119,694	-				-0.7
1,119,697	+				-0.6
1,119,697	+				+0.0
1,119,704	-				-2.3
1,119,713	+				-0.8
1,119,721	-				-1.6
1,119,721	-				-0.5
1,119,721	-				-4.2
1,119,721	-				-0.5
1,119,750	-				+0.0
1,119,776	+				+0.8
1,119,784	-				+0.4
1,119,784	-				-1.8
1,119,792	+				-1.2
1,119,800	-				-1.0
1,119,858	+				-0.7
1,119,858	-				+0.9
1,119,886	-		CCNA_01031	0.11	-1.9
1,119,891	-		CCNA_01031	0.11	+0.4
1,119,920	+		CCNA_01031	0.13	-0.8
1,119,947	+		CCNA_01031	0.15	+1.5
1,119,958	+		CCNA_01031	0.16	+1.6
1,119,985	+		CCNA_01031	0.17	-0.4
1,119,985	+		CCNA_01031	0.17	-2.0
1,119,986	-		CCNA_01031	0.17	-0.4
1,120,032	-		CCNA_01031	0.20	-0.7
1,120,032	-		CCNA_01031	0.20	-0.6
1,120,036	+		CCNA_01031	0.20	-0.7
1,120,059	+		CCNA_01031	0.22	+0.6
1,120,059	+		CCNA_01031	0.22	+0.4
1,120,079	+		CCNA_01031	0.23	-2.7
1,120,079	+		CCNA_01031	0.23	+0.8
1,120,079	+		CCNA_01031	0.23	+0.3
1,120,079	+		CCNA_01031	0.23	+1.6
1,120,092	-		CCNA_01031	0.24	+0.3
1,120,094	-		CCNA_01031	0.24	-0.1
1,120,094	-		CCNA_01031	0.24	-0.8
1,120,094	-		CCNA_01031	0.24	-2.2
1,120,123	+		CCNA_01031	0.26	+0.9
1,120,191	+		CCNA_01031	0.30	-0.5
1,120,196	+		CCNA_01031	0.30	+0.6
1,120,199	-		CCNA_01031	0.30	-0.5
1,120,209	-		CCNA_01031	0.31	-0.9
1,120,217	-		CCNA_01031	0.31	-0.4
1,120,245	+		CCNA_01031	0.33	-0.3
1,120,263	+		CCNA_01031	0.34	-0.4
1,120,267	+		CCNA_01031	0.34	+0.6
1,120,272	+		CCNA_01031	0.35	-1.1
1,120,288	+		CCNA_01031	0.36	-0.2
1,120,293	+		CCNA_01031	0.36	-0.8
1,120,308	+		CCNA_01031	0.37	-2.5
1,120,316	+		CCNA_01031	0.37	+0.1
1,120,324	-		CCNA_01031	0.38	-1.3
1,120,324	-		CCNA_01031	0.38	-1.2
1,120,326	+		CCNA_01031	0.38	+0.3
1,120,326	+		CCNA_01031	0.38	+0.8
1,120,334	-		CCNA_01031	0.38	+0.1
1,120,334	-		CCNA_01031	0.38	-0.4
1,120,349	+		CCNA_01031	0.39	-1.2
1,120,372	+		CCNA_01031	0.41	-0.9
1,120,372	+		CCNA_01031	0.41	-1.2
1,120,378	+		CCNA_01031	0.41	-0.1
1,120,380	-		CCNA_01031	0.41	+0.5
1,120,381	-		CCNA_01031	0.41	-2.7
1,120,429	-		CCNA_01031	0.44	-0.9
1,120,457	+		CCNA_01031	0.46	-1.4
1,120,464	-		CCNA_01031	0.46	+0.4
1,120,487	+		CCNA_01031	0.48	-2.4
1,120,492	+		CCNA_01031	0.48	-1.8
1,120,492	+		CCNA_01031	0.48	-0.9
1,120,492	+		CCNA_01031	0.48	-2.3
1,120,495	-		CCNA_01031	0.48	+0.3
1,120,500	-		CCNA_01031	0.48	-2.2
1,120,507	-		CCNA_01031	0.49	+0.8
1,120,529	-		CCNA_01031	0.50	-0.9
1,120,543	+		CCNA_01031	0.51	+0.5
1,120,551	-		CCNA_01031	0.51	+0.7
1,120,551	-		CCNA_01031	0.51	+0.1
1,120,551	-		CCNA_01031	0.51	-1.1
1,120,580	+		CCNA_01031	0.53	+2.2
1,120,620	-		CCNA_01031	0.56	-0.2
1,120,640	+		CCNA_01031	0.57	-0.8
1,120,669	-		CCNA_01031	0.59	-2.9
1,120,681	+		CCNA_01031	0.59	-1.9
1,120,702	+		CCNA_01031	0.61	-0.5
1,120,702	+		CCNA_01031	0.61	+0.5
1,120,715	-		CCNA_01031	0.61	+0.3
1,120,717	+		CCNA_01031	0.61	-1.1
1,120,717	+		CCNA_01031	0.61	-0.1
1,120,717	+		CCNA_01031	0.61	+0.1
1,120,717	+		CCNA_01031	0.61	+0.2
1,120,717	+		CCNA_01031	0.61	+0.1
1,120,717	+		CCNA_01031	0.61	+1.1
1,120,717	+		CCNA_01031	0.61	+0.0
1,120,717	+		CCNA_01031	0.61	+0.0
1,120,717	+		CCNA_01031	0.61	+0.3
1,120,717	+		CCNA_01031	0.61	+0.3
1,120,717	+		CCNA_01031	0.61	-1.0
1,120,725	-		CCNA_01031	0.62	-0.2
1,120,725	-		CCNA_01031	0.62	-0.2
1,120,725	-		CCNA_01031	0.62	-2.3
1,120,725	-		CCNA_01031	0.62	+0.1
1,120,725	-		CCNA_01031	0.62	-0.5
1,120,725	-		CCNA_01031	0.62	-0.5
1,120,725	-		CCNA_01031	0.62	-0.6
1,120,773	-		CCNA_01031	0.65	-0.1
1,120,774	+		CCNA_01031	0.65	+0.6
1,120,779	+		CCNA_01031	0.65	+0.1
1,120,789	+		CCNA_01031	0.66	+0.5
1,120,804	+		CCNA_01031	0.67	+0.3
1,120,812	-		CCNA_01031	0.67	-1.5
1,120,825	+		CCNA_01031	0.68	+1.8
1,120,846	+		CCNA_01031	0.69	+0.6
1,120,848	-		CCNA_01031	0.69	-0.4
1,120,857	+		CCNA_01031	0.70	-0.4
1,120,863	-		CCNA_01031	0.70	+0.5
1,120,863	-		CCNA_01031	0.70	+0.6
1,120,863	-		CCNA_01031	0.70	+0.6
1,120,925	-		CCNA_01031	0.74	-1.4
1,120,925	-		CCNA_01031	0.74	-0.4
1,120,957	-		CCNA_01031	0.76	-0.5
1,120,957	-		CCNA_01031	0.76	-0.2
1,120,962	-		CCNA_01031	0.76	-0.0
1,120,969	+		CCNA_01031	0.77	+1.1
1,120,974	+		CCNA_01031	0.77	-0.8
1,120,975	+		CCNA_01031	0.77	-0.5
1,121,002	+		CCNA_01031	0.79	-1.0
1,121,003	-		CCNA_01031	0.79	+0.0
1,121,003	-		CCNA_01031	0.79	+0.4
1,121,010	-		CCNA_01031	0.79	-0.4
1,121,010	-		CCNA_01031	0.79	+0.2
1,121,024	+		CCNA_01031	0.80	+0.8
1,121,088	-		CCNA_01031	0.84	+1.1
1,121,104	-		CCNA_01031	0.85	+0.3
1,121,118	+		CCNA_01031	0.86	+0.9
1,121,129	+		CCNA_01031	0.86	-1.1
1,121,136	-		CCNA_01031	0.87	+0.5
1,121,145	-		CCNA_01031	0.87	-1.1
1,121,145	-		CCNA_01031	0.87	-1.2
1,121,320	-				-1.2
1,121,356	-				+0.3
1,121,361	-				+2.1
1,121,396	+				-0.8
1,121,425	+				-2.7
1,121,425	+				-2.0
1,121,433	-				+0.5
1,121,433	-				-0.4
1,121,433	-				-1.6
1,121,435	-				+0.5
1,121,491	-				-1.6
1,121,500	-		CCNA_01032	0.10	-0.9
1,121,529	+		CCNA_01032	0.15	-0.6
1,121,542	+		CCNA_01032	0.17	-0.4
1,121,547	+		CCNA_01032	0.18	+0.8
1,121,550	-		CCNA_01032	0.19	+0.2
1,121,575	+		CCNA_01032	0.23	-0.9
1,121,575	+		CCNA_01032	0.23	-0.5
1,121,575	+		CCNA_01032	0.23	-0.5
1,121,583	-		CCNA_01032	0.24	-0.1
1,121,583	-		CCNA_01032	0.24	+0.4
1,121,621	+		CCNA_01032	0.30	+0.0
1,121,647	-		CCNA_01032	0.35	-0.5
1,121,686	+		CCNA_01032	0.41	-0.4
1,121,686	+		CCNA_01032	0.41	-0.1
1,121,686	+		CCNA_01032	0.41	-1.1
1,121,686	+		CCNA_01032	0.41	+0.1
1,121,686	+		CCNA_01032	0.41	-0.5
1,121,686	+		CCNA_01032	0.41	-0.3
1,121,686	+		CCNA_01032	0.41	-1.7
1,121,694	-		CCNA_01032	0.43	+0.5
1,121,696	+		CCNA_01032	0.43	-0.4
1,121,704	-		CCNA_01032	0.44	+2.1
1,121,706	+		CCNA_01032	0.45	-0.9
1,121,728	-		CCNA_01032	0.48	-1.8
1,121,785	-		CCNA_01032	0.58	-0.7
1,121,815	+		CCNA_01032	0.63	+0.7
1,121,820	+		CCNA_01032	0.64	-1.1
1,121,830	-		CCNA_01032	0.66	-0.6
1,121,831	+		CCNA_01032	0.66	+1.3
1,121,839	-		CCNA_01032	0.67	+0.5
1,121,848	+		CCNA_01032	0.69	-0.6
1,121,857	-		CCNA_01032	0.70	-0.4
1,121,863	-		CCNA_01032	0.71	+0.1
1,121,870	+		CCNA_01032	0.72	+0.6
1,121,882	+		CCNA_01032	0.74	+0.1
1,121,973	+		CCNA_01032	0.90	+0.5
1,121,981	-				-1.5
1,122,002	-				-0.2
1,122,028	+				-0.1
1,122,028	-				-0.2
1,122,036	-				-1.8
1,122,036	-				-0.2
1,122,062	+				-0.0
1,122,077	+				+0.4
1,122,188	-		CCNA_01033	0.19	+2.2
1,122,252	-		CCNA_01033	0.26	-0.7
1,122,257	-		CCNA_01033	0.26	-1.1
1,122,306	-		CCNA_01033	0.31	+0.3
1,122,308	+		CCNA_01033	0.31	+0.4
1,122,351	+		CCNA_01033	0.36	+0.2