Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01024

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,110,620	-		CCNA_01023	0.46	-0.8
1,110,623	+		CCNA_01023	0.46	+0.2
1,110,682	+		CCNA_01023	0.50	+0.1
1,110,687	+		CCNA_01023	0.50	+0.1
1,110,687	+		CCNA_01023	0.50	+1.8
1,110,687	+		CCNA_01023	0.50	+0.4
1,110,687	+		CCNA_01023	0.50	+0.0
1,110,687	+		CCNA_01023	0.50	-0.2
1,110,687	+		CCNA_01023	0.50	+0.4
1,110,687	+		CCNA_01023	0.50	+0.8
1,110,687	+		CCNA_01023	0.50	-1.3
1,110,687	+		CCNA_01023	0.50	+0.7
1,110,688	-		CCNA_01023	0.50	-0.7
1,110,695	-		CCNA_01023	0.51	+0.6
1,110,695	-		CCNA_01023	0.51	-0.4
1,110,695	-		CCNA_01023	0.51	-1.1
1,110,695	-		CCNA_01023	0.51	+0.5
1,110,695	-		CCNA_01023	0.51	-0.7
1,110,695	-		CCNA_01023	0.51	-0.3
1,110,695	-		CCNA_01023	0.51	+0.0
1,110,695	-		CCNA_01023	0.51	-0.4
1,110,695	-		CCNA_01023	0.51	+0.2
1,110,695	-		CCNA_01023	0.51	+0.1
1,110,695	-		CCNA_01023	0.51	+0.4
1,110,695	-		CCNA_01023	0.51	-0.4
1,110,695	-		CCNA_01023	0.51	-1.7
1,110,695	-		CCNA_01023	0.51	-0.6
1,110,695	-		CCNA_01023	0.51	+0.5
1,110,695	-		CCNA_01023	0.51	-0.6
1,110,695	-		CCNA_01023	0.51	-1.1
1,110,695	-		CCNA_01023	0.51	+0.7
1,110,695	-		CCNA_01023	0.51	-0.4
1,110,695	-		CCNA_01023	0.51	-1.0
1,110,695	-		CCNA_01023	0.51	+0.3
1,110,695	-		CCNA_01023	0.51	-1.7
1,110,695	-		CCNA_01023	0.51	-0.4
1,110,695	-		CCNA_01023	0.51	-0.4
1,110,695	-		CCNA_01023	0.51	-0.4
1,110,695	-		CCNA_01023	0.51	-0.2
1,110,695	-		CCNA_01023	0.51	+1.0
1,110,697	-		CCNA_01023	0.51	+0.0
1,110,699	+		CCNA_01023	0.51	+0.1
1,110,705	+		CCNA_01023	0.51	-0.4
1,110,707	-		CCNA_01023	0.52	-0.2
1,110,724	+		CCNA_01023	0.53	+1.1
1,110,739	+		CCNA_01023	0.54	-0.1
1,110,747	-		CCNA_01023	0.54	+0.6
1,110,747	-		CCNA_01023	0.54	+0.4
1,110,758	+		CCNA_01023	0.55	-0.3
1,110,766	+		CCNA_01023	0.55	+0.6
1,110,766	+		CCNA_01023	0.55	-0.6
1,110,768	-		CCNA_01023	0.55	-1.5
1,110,773	+		CCNA_01023	0.56	+1.6
1,110,840	+		CCNA_01023	0.60	+0.1
1,110,859	+		CCNA_01023	0.61	-0.4
1,110,894	+		CCNA_01023	0.64	-0.8
1,110,908	+		CCNA_01023	0.64	+0.4
1,110,916	-		CCNA_01023	0.65	-0.5
1,110,916	-		CCNA_01023	0.65	+0.3
1,110,926	-		CCNA_01023	0.66	-2.3
1,110,953	-		CCNA_01023	0.67	+0.5
1,110,960	-		CCNA_01023	0.68	+1.4
1,110,960	-		CCNA_01023	0.68	-0.5
1,110,961	-		CCNA_01023	0.68	-0.9
1,110,993	+		CCNA_01023	0.70	+2.6
1,111,018	-		CCNA_01023	0.72	+1.5
1,111,084	+		CCNA_01023	0.76	+0.9
1,111,084	+		CCNA_01023	0.76	+0.9
1,111,100	-		CCNA_01023	0.77	-0.0
1,111,105	-		CCNA_01023	0.77	+0.1
1,111,112	+		CCNA_01023	0.78	-0.9
1,111,130	-		CCNA_01023	0.79	+0.6
1,111,144	+		CCNA_01023	0.80	+1.4
1,111,160	+		CCNA_01023	0.81	+0.4
1,111,177	+		CCNA_01023	0.82	+0.9
1,111,182	+		CCNA_01023	0.82	-0.6
1,111,182	+		CCNA_01023	0.82	+0.9
1,111,182	+		CCNA_01023	0.82	+0.1
1,111,182	+		CCNA_01023	0.82	+0.6
1,111,190	-		CCNA_01023	0.83	+0.7
1,111,190	-		CCNA_01023	0.83	-0.3
1,111,196	-		CCNA_01023	0.83	+0.1
1,111,211	-		CCNA_01023	0.84	+1.4
1,111,257	+		CCNA_01023	0.87	+0.9
1,111,265	-		CCNA_01023	0.87	+0.7
1,111,265	-		CCNA_01023	0.87	-1.3
1,111,283	+		CCNA_01023	0.89	-2.5
1,111,291	-		CCNA_01023	0.89	-0.0
1,111,291	-		CCNA_01023	0.89	+1.1
1,111,293	+		CCNA_01023	0.89	-1.8
1,111,293	+		CCNA_01023	0.89	+1.4
1,111,293	+		CCNA_01023	0.89	+0.4
1,111,328	+				-1.3
1,111,328	+				+0.6
1,111,328	+				-0.4
1,111,328	+				-0.6
1,111,329	-				+0.5
1,111,336	-				+0.7
1,111,336	-				-0.3
1,111,336	-				+1.1
1,111,336	-				+0.2
1,111,337	+				+0.5
1,111,337	+				+1.4
1,111,381	-				+1.2
1,111,409	-				-1.2
1,111,440	+				-1.3
1,111,440	+				-1.1
1,111,448	-				+0.6
1,111,529	+				-0.6
1,111,537	-				+1.5
1,111,537	-				+0.4
1,111,538	+				-0.1
1,111,660	+				-0.2
1,111,668	-		CCNA_01024	0.10	+1.4
1,111,673	-		CCNA_01024	0.11	+0.5
1,111,673	-		CCNA_01024	0.11	+0.6
1,111,748	-		CCNA_01024	0.26	+0.4
1,111,791	-		CCNA_01024	0.35	+0.3
1,111,792	+		CCNA_01024	0.35	+0.6
1,111,799	-		CCNA_01024	0.37	+0.7
1,111,839	+		CCNA_01024	0.45	-1.1
1,111,844	+		CCNA_01024	0.46	-0.1
1,111,862	-		CCNA_01024	0.49	+0.4
1,111,873	+		CCNA_01024	0.52	-1.3
1,111,881	+		CCNA_01024	0.53	-0.2
1,111,966	-		CCNA_01024	0.71	+0.3
1,112,028	+		CCNA_01024	0.83	+0.2
1,112,028	+		CCNA_01024	0.83	+0.6
1,112,028	+		CCNA_01024	0.83	-1.6
1,112,028	+		CCNA_01024	0.83	-0.4
1,112,036	-		CCNA_01024	0.85	+0.5
1,112,036	-		CCNA_01024	0.85	+0.7
1,112,036	-		CCNA_01024	0.85	+1.2
1,112,036	-		CCNA_01024	0.85	-0.2
1,112,036	-		CCNA_01024	0.85	+0.5
1,112,048	+		CCNA_01024	0.87	+2.3
1,112,056	-		CCNA_01024	0.89	+0.3
1,112,056	-		CCNA_01024	0.89	-0.6
1,112,068	-				+0.6
1,112,083	+				-0.7
1,112,103	+				+1.7
1,112,106	-				+0.5
1,112,111	-				+0.2
1,112,111	-				+0.3
1,112,111	-				+0.1
1,112,121	-				+1.2
1,112,194	+		CCNA_01025	0.11	-1.6
1,112,194	+		CCNA_01025	0.11	-0.0
1,112,194	+		CCNA_01025	0.11	-0.4
1,112,201	+		CCNA_01025	0.12	-1.9
1,112,317	-		CCNA_01025	0.31	+0.1
1,112,344	-		CCNA_01025	0.35	+0.3
1,112,363	-		CCNA_01025	0.38	+0.3
1,112,386	-		CCNA_01025	0.42	-0.2
1,112,389	+		CCNA_01025	0.42	-0.6
1,112,397	-		CCNA_01025	0.44	+0.2
1,112,399	+		CCNA_01025	0.44	-0.8
1,112,407	-		CCNA_01025	0.45	+0.4
1,112,420	-		CCNA_01025	0.47	-0.3
1,112,474	+		CCNA_01025	0.56	+0.3
1,112,501	+		CCNA_01025	0.60	-0.6
1,112,508	-		CCNA_01025	0.62	-0.1
1,112,517	+		CCNA_01025	0.63	-1.0
1,112,517	+		CCNA_01025	0.63	+0.6
1,112,525	+		CCNA_01025	0.64	+0.9
1,112,542	-		CCNA_01025	0.67	+0.2
1,112,667	+		CCNA_01025	0.87	+0.6
1,112,667	+		CCNA_01025	0.87	-1.7
1,112,667	+		CCNA_01025	0.87	-0.9
1,112,667	+		CCNA_01025	0.87	-0.8
1,112,667	+		CCNA_01025	0.87	+0.6
1,112,667	+		CCNA_01025	0.87	-0.8
1,112,670	-		CCNA_01025	0.88	+0.5
1,112,675	-		CCNA_01025	0.88	+0.6
1,112,688	-				+0.0
1,112,688	-				+0.3
1,112,688	-				+0.8
1,112,693	+				+0.9
1,112,700	-				+0.8
1,112,750	+				-1.1
1,112,758	-				+0.1
1,112,808	+		CCNA_01026	0.11	-1.8
1,112,816	-		CCNA_01026	0.12	-0.4
1,112,878	+		CCNA_01026	0.20	+0.1
1,112,883	-		CCNA_01026	0.21	+0.3
1,112,891	-		CCNA_01026	0.22	+0.2
1,112,896	+		CCNA_01026	0.23	+1.0
1,112,947	-		CCNA_01026	0.30	+1.6
1,112,967	+		CCNA_01026	0.33	+0.8
1,112,980	-		CCNA_01026	0.35	-0.3
1,113,091	+		CCNA_01026	0.50	+2.9
1,113,109	-		CCNA_01026	0.53	+0.4
1,113,109	-		CCNA_01026	0.53	-0.2