Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01013

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,092,724	-		CCNA_01012	0.28	+0.3
1,092,732	-		CCNA_01012	0.28	-1.1
1,092,808	+		CCNA_01012	0.34	-0.2
1,092,808	+		CCNA_01012	0.34	+2.3
1,092,808	+		CCNA_01012	0.34	-0.4
1,092,811	-		CCNA_01012	0.34	-1.2
1,092,813	+		CCNA_01012	0.34	-1.8
1,092,813	+		CCNA_01012	0.34	+0.2
1,092,814	+		CCNA_01012	0.34	+1.2
1,092,814	+		CCNA_01012	0.34	-1.3
1,092,816	-		CCNA_01012	0.35	+0.3
1,092,816	-		CCNA_01012	0.35	+0.8
1,092,816	-		CCNA_01012	0.35	-1.3
1,092,816	-		CCNA_01012	0.35	-1.6
1,092,821	-		CCNA_01012	0.35	-0.5
1,092,953	+		CCNA_01012	0.44	+0.1
1,092,958	+		CCNA_01012	0.45	+1.1
1,092,965	+		CCNA_01012	0.45	+0.9
1,093,010	+		CCNA_01012	0.49	-0.2
1,093,018	-		CCNA_01012	0.49	-1.9
1,093,047	+		CCNA_01012	0.51	-2.0
1,093,136	+		CCNA_01012	0.58	-0.9
1,093,136	+		CCNA_01012	0.58	-0.1
1,093,144	-		CCNA_01012	0.58	-1.6
1,093,151	+		CCNA_01012	0.59	-1.7
1,093,173	+		CCNA_01012	0.60	+0.9
1,093,173	+		CCNA_01012	0.60	+0.9
1,093,223	+		CCNA_01012	0.64	-0.2
1,093,336	-		CCNA_01012	0.72	+0.3
1,093,368	-		CCNA_01012	0.75	+0.3
1,093,368	-		CCNA_01012	0.75	-0.4
1,093,439	+		CCNA_01012	0.80	-0.2
1,093,536	-		CCNA_01012	0.87	-0.2
1,093,550	-		CCNA_01012	0.88	-0.7
1,093,553	+		CCNA_01012	0.88	+0.4
1,093,561	+		CCNA_01012	0.89	+0.2
1,093,566	+		CCNA_01012	0.89	+0.3
1,093,597	-				-0.7
1,093,615	-				-0.8
1,093,659	-				+1.1
1,093,674	+				-1.2
1,093,706	-				+0.6
1,093,707	+				-0.7
1,093,715	-				-0.8
1,093,801	+		CCNA_01013	0.12	-0.8
1,093,809	-		CCNA_01013	0.13	+1.8
1,093,855	+		CCNA_01013	0.20	+0.6
1,093,855	+		CCNA_01013	0.20	+0.6
1,093,870	+		CCNA_01013	0.22	+0.8
1,093,870	+		CCNA_01013	0.22	+0.6
1,093,878	-		CCNA_01013	0.23	-1.8
1,093,894	+		CCNA_01013	0.25	+0.8
1,093,902	+		CCNA_01013	0.26	+0.2
1,093,951	-		CCNA_01013	0.33	-2.5
1,093,998	-		CCNA_01013	0.40	+0.7
1,094,006	-		CCNA_01013	0.41	-2.3
1,094,019	+		CCNA_01013	0.43	-0.7
1,094,043	+		CCNA_01013	0.46	+0.5
1,094,117	+		CCNA_01013	0.57	+0.7
1,094,196	-		CCNA_01013	0.68	+0.9
1,094,199	+		CCNA_01013	0.68	+0.3
1,094,221	+		CCNA_01013	0.71	+0.3
1,094,248	-		CCNA_01013	0.75	-0.6
1,094,293	+		CCNA_01013	0.82	+0.4
1,094,331	-		CCNA_01013	0.87	+0.1
1,094,342	+		CCNA_01013	0.89	+0.9
1,094,376	-				+0.6
1,094,411	+				+0.2
1,094,425	+				+1.4
1,094,435	+				+0.5
1,094,435	+				+0.9
1,094,502	+		CCNA_R0023	0.66	+1.6
1,094,524	+				+0.2
1,094,544	+				+1.6
1,094,618	+				+0.6
1,094,635	+				+0.0
1,094,648	-				-0.7
1,094,648	-				-0.6
1,094,685	+				-0.8
1,094,687	+				+0.6
1,094,708	-				+0.3
1,094,743	-				+0.4
1,094,778	+				+0.3
1,094,786	-				+0.8
1,094,796	-				-1.3
1,094,852	+		CCNA_01014	0.13	+0.5
1,094,859	+		CCNA_01014	0.14	-0.9
1,094,879	+		CCNA_01014	0.18	-0.1
1,094,884	+		CCNA_01014	0.19	+1.2
1,094,887	-		CCNA_01014	0.20	+0.3
1,094,887	-		CCNA_01014	0.20	-0.1
1,094,898	-		CCNA_01014	0.22	-1.8
1,094,993	+		CCNA_01014	0.42	+1.6
1,095,015	-		CCNA_01014	0.47	+0.3
1,095,068	-		CCNA_01014	0.58	+0.1
1,095,073	+		CCNA_01014	0.59	-0.5
1,095,081	-		CCNA_01014	0.61	-0.1
1,095,095	+		CCNA_01014	0.64	+0.1
1,095,119	+		CCNA_01014	0.69	-0.1
1,095,127	-		CCNA_01014	0.70	+0.1
1,095,127	-		CCNA_01014	0.70	-0.3
1,095,127	-		CCNA_01014	0.70	+0.6
1,095,186	-		CCNA_01014	0.83	-0.5
1,095,199	+		CCNA_01014	0.86	-0.5
1,095,221	+				+0.3
1,095,227	+				+1.0
1,095,240	-				-0.4
1,095,254	-				+0.0
1,095,265	-				-0.7
1,095,265	-				+1.8
1,095,281	+				+0.1
1,095,355	+				-0.6
1,095,355	-				-0.9
1,095,357	+				-0.5
1,095,357	+				-0.6
1,095,361	-				-1.1
1,095,365	-				-0.3