Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01000

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,081,609	+		CCNA_00998	0.58	+0.7
1,081,614	+		CCNA_00998	0.59	-0.9
1,081,622	-		CCNA_00998	0.61	-0.7
1,081,675	+		CCNA_00998	0.73	+0.1
1,081,675	+		CCNA_00998	0.73	+0.5
1,081,675	+		CCNA_00998	0.73	-0.3
1,081,675	+		CCNA_00998	0.73	+0.6
1,081,681	+		CCNA_00998	0.75	-0.3
1,081,683	-		CCNA_00998	0.75	+0.1
1,081,683	-		CCNA_00998	0.75	-1.2
1,081,689	-		CCNA_00998	0.77	+0.8
1,081,694	-		CCNA_00998	0.78	-1.0
1,081,726	-		CCNA_00998	0.85	-0.2
1,081,735	+		CCNA_00998	0.88	+1.3
1,081,843	+				+0.8
1,081,987	-				+0.5
1,082,040	-		CCNA_00999	0.11	-1.9
1,082,132	+		CCNA_00999	0.30	-0.1
1,082,151	+		CCNA_00999	0.34	-0.0
1,082,179	-		CCNA_00999	0.39	+0.2
1,082,199	+		CCNA_00999	0.43	-1.1
1,082,258	-		CCNA_00999	0.55	-0.4
1,082,337	+		CCNA_00999	0.71	-0.4
1,082,350	+		CCNA_00999	0.73	+1.0
1,082,355	+		CCNA_00999	0.74	+0.6
1,082,358	+		CCNA_00999	0.75	-0.9
1,082,368	-		CCNA_00999	0.77	+0.2
1,082,457	-				-0.2
1,082,559	-		CCNA_01000	0.12	+0.1
1,082,582	-		CCNA_01000	0.24	+1.2
1,082,582	-		CCNA_01000	0.24	+0.6
1,082,582	-		CCNA_01000	0.24	-0.2
1,082,582	-		CCNA_01000	0.24	+1.0
1,082,582	-		CCNA_01000	0.24	+0.2
1,082,712	+				+0.6
1,082,732	-				+1.4
1,082,770	+				+1.0
1,082,770	+				-0.0
1,082,770	+				+0.5
1,082,778	-				+0.4
1,082,778	-				+0.2
1,082,778	-				+0.6
1,082,785	+				+0.2
1,082,785	+				+1.8
1,082,800	-				+0.6
1,082,955	+				-0.7
1,082,974	+				-0.3
1,082,983	-				+0.2
1,083,000	+				-0.7
1,083,107	-				-0.4
1,083,213	+		CCNA_01001	0.20	+1.1
1,083,299	-		CCNA_01001	0.30	-0.3
1,083,304	-		CCNA_01001	0.30	-0.9
1,083,309	-		CCNA_01001	0.31	-1.5
1,083,319	-		CCNA_01001	0.32	+0.3
1,083,358	+		CCNA_01001	0.36	-0.6
1,083,369	+		CCNA_01001	0.37	+0.6
1,083,377	-		CCNA_01001	0.38	-0.3
1,083,388	+		CCNA_01001	0.39	+0.3
1,083,438	+		CCNA_01001	0.45	+0.1
1,083,438	+		CCNA_01001	0.45	-0.9
1,083,446	-		CCNA_01001	0.46	+1.6
1,083,547	+		CCNA_01001	0.57	-0.8
1,083,594	+		CCNA_01001	0.62	+0.3
1,083,629	-		CCNA_01001	0.66	+1.0
1,083,641	+		CCNA_01001	0.67	-1.2
1,083,654	+		CCNA_01001	0.69	-0.7
1,083,656	-		CCNA_01001	0.69	-0.0
1,083,667	-		CCNA_01001	0.70	+0.7
1,083,667	-		CCNA_01001	0.70	-1.1
1,083,667	-		CCNA_01001	0.70	+0.3
1,083,667	-		CCNA_01001	0.70	-1.1
1,083,709	-		CCNA_01001	0.75	-0.3
1,083,717	-		CCNA_01001	0.75	-0.9