Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20675 and CA264_20680 are separated by 62 nucleotides CA264_20680 and CA264_20685 are separated by 138 nucleotides CA264_20685 and CA264_20690 are separated by 218 nucleotides
CA264_20675: CA264_20675 - trehalase, at 4,759,738 to 4,761,375
_20675
CA264_20680: CA264_20680 - hypothetical protein, at 4,761,438 to 4,761,833
_20680
CA264_20685: CA264_20685 - transposase, at 4,761,972 to 4,762,514
_20685
CA264_20690: CA264_20690 - methylmalonyl-CoA mutase, at 4,762,733 to 4,764,877
_20690
Position (kb)
4761
4762 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4760.448 kb on + strand, within CA264_20675 at 4760.449 kb on - strand, within CA264_20675 at 4760.492 kb on - strand, within CA264_20675 at 4760.492 kb on - strand, within CA264_20675 at 4760.544 kb on - strand, within CA264_20675 at 4760.706 kb on + strand, within CA264_20675 at 4760.748 kb on + strand, within CA264_20675 at 4760.748 kb on + strand, within CA264_20675 at 4760.749 kb on - strand, within CA264_20675 at 4760.757 kb on - strand, within CA264_20675 at 4760.757 kb on - strand, within CA264_20675 at 4760.786 kb on + strand, within CA264_20675 at 4760.787 kb on - strand, within CA264_20675 at 4760.806 kb on + strand, within CA264_20675 at 4760.807 kb on - strand, within CA264_20675 at 4760.851 kb on - strand, within CA264_20675 at 4760.891 kb on - strand, within CA264_20675 at 4760.898 kb on + strand, within CA264_20675 at 4760.899 kb on - strand, within CA264_20675 at 4760.919 kb on - strand, within CA264_20675 at 4760.949 kb on + strand, within CA264_20675 at 4760.950 kb on - strand, within CA264_20675 at 4760.950 kb on - strand, within CA264_20675 at 4760.950 kb on - strand, within CA264_20675 at 4760.950 kb on - strand, within CA264_20675 at 4760.950 kb on - strand, within CA264_20675 at 4760.950 kb on - strand, within CA264_20675 at 4761.004 kb on - strand, within CA264_20675 at 4761.007 kb on + strand, within CA264_20675 at 4761.025 kb on + strand, within CA264_20675 at 4761.025 kb on + strand, within CA264_20675 at 4761.026 kb on - strand, within CA264_20675 at 4761.061 kb on - strand, within CA264_20675 at 4761.086 kb on - strand, within CA264_20675 at 4761.126 kb on + strand, within CA264_20675 at 4761.126 kb on + strand, within CA264_20675 at 4761.126 kb on + strand, within CA264_20675 at 4761.126 kb on + strand, within CA264_20675 at 4761.127 kb on - strand, within CA264_20675 at 4761.127 kb on - strand, within CA264_20675 at 4761.232 kb on + strand at 4761.272 kb on + strand at 4761.273 kb on - strand at 4761.357 kb on - strand at 4761.376 kb on - strand at 4761.434 kb on + strand at 4761.435 kb on - strand at 4761.435 kb on - strand at 4761.435 kb on - strand at 4761.437 kb on - strand at 4761.439 kb on + strand at 4761.440 kb on - strand at 4761.440 kb on - strand at 4761.440 kb on - strand at 4761.503 kb on + strand, within CA264_20680 at 4761.505 kb on + strand, within CA264_20680 at 4761.505 kb on + strand, within CA264_20680 at 4761.584 kb on - strand, within CA264_20680 at 4761.584 kb on - strand, within CA264_20680 at 4761.601 kb on + strand, within CA264_20680 at 4761.620 kb on + strand, within CA264_20680 at 4761.648 kb on + strand, within CA264_20680 at 4761.673 kb on + strand, within CA264_20680 at 4761.674 kb on - strand, within CA264_20680 at 4761.728 kb on + strand, within CA264_20680 at 4761.751 kb on - strand, within CA264_20680 at 4761.799 kb on - strand at 4761.826 kb on - strand at 4761.826 kb on - strand at 4761.826 kb on - strand at 4761.844 kb on - strand at 4761.844 kb on - strand at 4761.851 kb on + strand at 4761.859 kb on + strand at 4761.921 kb on + strand at 4761.922 kb on - strand at 4761.922 kb on - strand at 4761.922 kb on - strand at 4761.966 kb on - strand at 4761.974 kb on - strand at 4761.986 kb on + strand at 4761.987 kb on - strand at 4762.129 kb on - strand, within CA264_20685 at 4762.129 kb on - strand, within CA264_20685 at 4762.160 kb on + strand, within CA264_20685 at 4762.161 kb on - strand, within CA264_20685 at 4762.181 kb on + strand, within CA264_20685 at 4762.203 kb on + strand, within CA264_20685 at 4762.203 kb on + strand, within CA264_20685 at 4762.258 kb on + strand, within CA264_20685 at 4762.259 kb on - strand, within CA264_20685 at 4762.261 kb on - strand, within CA264_20685 at 4762.296 kb on - strand, within CA264_20685 at 4762.360 kb on + strand, within CA264_20685 at 4762.361 kb on - strand, within CA264_20685 at 4762.368 kb on + strand, within CA264_20685 at 4762.390 kb on + strand, within CA264_20685 at 4762.437 kb on + strand, within CA264_20685 at 4762.467 kb on - strand at 4762.475 kb on - strand at 4762.502 kb on - strand at 4762.516 kb on + strand at 4762.517 kb on - strand at 4762.517 kb on - strand at 4762.517 kb on - strand at 4762.517 kb on - strand at 4762.521 kb on - strand at 4762.541 kb on - strand at 4762.541 kb on - strand at 4762.542 kb on + strand at 4762.542 kb on + strand at 4762.543 kb on - strand at 4762.582 kb on + strand at 4762.640 kb on - strand at 4762.641 kb on + strand at 4762.641 kb on + strand at 4762.680 kb on + strand at 4762.681 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 4,760,448 + CA264_20675 0.43 -2.2 4,760,449 - CA264_20675 0.43 -1.1 4,760,492 - CA264_20675 0.46 -0.4 4,760,492 - CA264_20675 0.46 -0.5 4,760,544 - CA264_20675 0.49 +2.2 4,760,706 + CA264_20675 0.59 +0.2 4,760,748 + CA264_20675 0.62 -0.2 4,760,748 + CA264_20675 0.62 -0.5 4,760,749 - CA264_20675 0.62 +1.9 4,760,757 - CA264_20675 0.62 -0.6 4,760,757 - CA264_20675 0.62 -2.0 4,760,786 + CA264_20675 0.64 -0.4 4,760,787 - CA264_20675 0.64 -1.0 4,760,806 + CA264_20675 0.65 +0.2 4,760,807 - CA264_20675 0.65 -1.0 4,760,851 - CA264_20675 0.68 -0.1 4,760,891 - CA264_20675 0.70 +0.7 4,760,898 + CA264_20675 0.71 +0.3 4,760,899 - CA264_20675 0.71 -0.4 4,760,919 - CA264_20675 0.72 -0.0 4,760,949 + CA264_20675 0.74 -0.1 4,760,950 - CA264_20675 0.74 -0.2 4,760,950 - CA264_20675 0.74 +0.3 4,760,950 - CA264_20675 0.74 +0.7 4,760,950 - CA264_20675 0.74 +0.7 4,760,950 - CA264_20675 0.74 -0.1 4,760,950 - CA264_20675 0.74 +1.0 4,761,004 - CA264_20675 0.77 +0.5 4,761,007 + CA264_20675 0.77 +0.2 4,761,025 + CA264_20675 0.79 +0.2 4,761,025 + CA264_20675 0.79 +0.0 4,761,026 - CA264_20675 0.79 +0.7 4,761,061 - CA264_20675 0.81 +0.7 4,761,086 - CA264_20675 0.82 +0.0 4,761,126 + CA264_20675 0.85 -1.5 4,761,126 + CA264_20675 0.85 -0.8 4,761,126 + CA264_20675 0.85 -0.8 4,761,126 + CA264_20675 0.85 +0.7 4,761,127 - CA264_20675 0.85 -0.0 4,761,127 - CA264_20675 0.85 +0.3 4,761,232 + +0.9 4,761,272 + +0.2 4,761,273 - +1.1 4,761,357 - +0.1 4,761,376 - +0.7 4,761,434 + +0.8 4,761,435 - -0.5 4,761,435 - +1.3 4,761,435 - -0.1 4,761,437 - -0.2 4,761,439 + +0.3 4,761,440 - +0.1 4,761,440 - +0.0 4,761,440 - -0.5 4,761,503 + CA264_20680 0.16 -0.1 4,761,505 + CA264_20680 0.17 -0.1 4,761,505 + CA264_20680 0.17 +1.1 4,761,584 - CA264_20680 0.37 +0.2 4,761,584 - CA264_20680 0.37 -0.1 4,761,601 + CA264_20680 0.41 +0.1 4,761,620 + CA264_20680 0.46 -1.7 4,761,648 + CA264_20680 0.53 +0.1 4,761,673 + CA264_20680 0.59 +0.9 4,761,674 - CA264_20680 0.60 -0.4 4,761,728 + CA264_20680 0.73 -0.1 4,761,751 - CA264_20680 0.79 +0.3 4,761,799 - +2.1 4,761,826 - +0.1 4,761,826 - -0.2 4,761,826 - +0.6 4,761,844 - +0.3 4,761,844 - +0.4 4,761,851 + +1.7 4,761,859 + -0.2 4,761,921 + +0.1 4,761,922 - -0.1 4,761,922 - +0.3 4,761,922 - +0.2 4,761,966 - +0.9 4,761,974 - -1.1 4,761,986 + -0.5 4,761,987 - +1.1 4,762,129 - CA264_20685 0.29 -0.6 4,762,129 - CA264_20685 0.29 -1.3 4,762,160 + CA264_20685 0.35 +0.1 4,762,161 - CA264_20685 0.35 -0.4 4,762,181 + CA264_20685 0.38 -0.4 4,762,203 + CA264_20685 0.43 +0.8 4,762,203 + CA264_20685 0.43 -0.1 4,762,258 + CA264_20685 0.53 -0.7 4,762,259 - CA264_20685 0.53 +0.3 4,762,261 - CA264_20685 0.53 +1.2 4,762,296 - CA264_20685 0.60 -0.0 4,762,360 + CA264_20685 0.71 +0.2 4,762,361 - CA264_20685 0.72 +1.2 4,762,368 + CA264_20685 0.73 -2.1 4,762,390 + CA264_20685 0.77 -0.7 4,762,437 + CA264_20685 0.86 +1.1 4,762,467 - -0.2 4,762,475 - -0.1 4,762,502 - +0.3 4,762,516 + +0.3 4,762,517 - -2.5 4,762,517 - +0.4 4,762,517 - +0.2 4,762,517 - -0.6 4,762,521 - -0.4 4,762,541 - +0.3 4,762,541 - +0.4 4,762,542 + +0.9 4,762,542 + -0.9 4,762,543 - -0.8 4,762,582 + +0.1 4,762,640 - +0.3 4,762,641 + -0.2 4,762,641 + +1.0 4,762,680 + -1.1 4,762,681 - -0.1
Or see this region's nucleotide sequence