Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18315 and CA264_18320 are separated by 91 nucleotides CA264_18320 and CA264_18325 are separated by 52 nucleotides CA264_18325 and CA264_18330 are separated by 169 nucleotides CA264_18330 and CA264_18335 are separated by 160 nucleotides
CA264_18315: CA264_18315 - alkene reductase, at 4,258,804 to 4,259,907
_18315
CA264_18320: CA264_18320 - 2,5-didehydrogluconate reductase, at 4,259,999 to 4,260,817
_18320
CA264_18325: CA264_18325 - MarR family transcriptional regulator, at 4,260,870 to 4,261,319
_18325
CA264_18330: CA264_18330 - hypothetical protein, at 4,261,489 to 4,261,938
_18330
CA264_18335: CA264_18335 - peptidase M16, at 4,262,099 to 4,263,358
_18335
Position (kb)
4260
4261
4262 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4259.887 kb on + strand at 4259.887 kb on + strand at 4259.888 kb on - strand at 4259.890 kb on + strand at 4259.891 kb on - strand at 4259.891 kb on - strand at 4259.970 kb on - strand at 4260.062 kb on + strand at 4260.062 kb on + strand at 4260.155 kb on + strand, within CA264_18320 at 4260.211 kb on - strand, within CA264_18320 at 4260.306 kb on + strand, within CA264_18320 at 4260.306 kb on + strand, within CA264_18320 at 4260.312 kb on + strand, within CA264_18320 at 4260.342 kb on + strand, within CA264_18320 at 4260.435 kb on + strand, within CA264_18320 at 4260.471 kb on + strand, within CA264_18320 at 4260.471 kb on + strand, within CA264_18320 at 4260.472 kb on - strand, within CA264_18320 at 4260.472 kb on - strand, within CA264_18320 at 4260.599 kb on + strand, within CA264_18320 at 4260.678 kb on + strand, within CA264_18320 at 4260.678 kb on + strand, within CA264_18320 at 4260.678 kb on + strand, within CA264_18320 at 4260.691 kb on + strand, within CA264_18320 at 4260.696 kb on - strand, within CA264_18320 at 4260.728 kb on + strand, within CA264_18320 at 4260.728 kb on + strand, within CA264_18320 at 4260.739 kb on - strand at 4261.299 kb on + strand at 4261.312 kb on - strand at 4261.334 kb on - strand at 4261.399 kb on - strand at 4261.399 kb on - strand at 4261.399 kb on - strand at 4261.402 kb on + strand at 4261.403 kb on - strand at 4261.404 kb on + strand at 4261.422 kb on - strand at 4261.467 kb on + strand at 4261.574 kb on - strand, within CA264_18330 at 4261.603 kb on + strand, within CA264_18330 at 4261.603 kb on + strand, within CA264_18330 at 4261.661 kb on - strand, within CA264_18330 at 4261.661 kb on - strand, within CA264_18330 at 4261.661 kb on - strand, within CA264_18330 at 4261.694 kb on + strand, within CA264_18330 at 4261.739 kb on + strand, within CA264_18330 at 4261.772 kb on + strand, within CA264_18330 at 4261.853 kb on - strand, within CA264_18330 at 4261.953 kb on - strand at 4262.031 kb on + strand at 4262.031 kb on + strand at 4262.031 kb on + strand at 4262.031 kb on + strand at 4262.080 kb on + strand at 4262.080 kb on + strand at 4262.081 kb on - strand at 4262.081 kb on - strand at 4262.136 kb on + strand at 4262.265 kb on + strand, within CA264_18335
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 4,259,887 + -0.6 4,259,887 + +0.5 4,259,888 - -0.3 4,259,890 + +0.1 4,259,891 - +0.1 4,259,891 - +0.6 4,259,970 - -0.4 4,260,062 + -0.9 4,260,062 + -0.0 4,260,155 + CA264_18320 0.19 -1.5 4,260,211 - CA264_18320 0.26 -0.2 4,260,306 + CA264_18320 0.37 +0.6 4,260,306 + CA264_18320 0.37 +0.2 4,260,312 + CA264_18320 0.38 -0.1 4,260,342 + CA264_18320 0.42 -0.3 4,260,435 + CA264_18320 0.53 -0.2 4,260,471 + CA264_18320 0.58 +0.9 4,260,471 + CA264_18320 0.58 -1.7 4,260,472 - CA264_18320 0.58 -0.2 4,260,472 - CA264_18320 0.58 -0.3 4,260,599 + CA264_18320 0.73 -1.1 4,260,678 + CA264_18320 0.83 +0.4 4,260,678 + CA264_18320 0.83 -0.6 4,260,678 + CA264_18320 0.83 -0.7 4,260,691 + CA264_18320 0.84 -0.2 4,260,696 - CA264_18320 0.85 +0.0 4,260,728 + CA264_18320 0.89 -0.1 4,260,728 + CA264_18320 0.89 -1.8 4,260,739 - -0.6 4,261,299 + -0.5 4,261,312 - -0.7 4,261,334 - -0.7 4,261,399 - -0.4 4,261,399 - -0.4 4,261,399 - -1.2 4,261,402 + -0.5 4,261,403 - -0.9 4,261,404 + -1.0 4,261,422 - -0.5 4,261,467 + -0.7 4,261,574 - CA264_18330 0.19 -0.2 4,261,603 + CA264_18330 0.25 -0.0 4,261,603 + CA264_18330 0.25 +0.2 4,261,661 - CA264_18330 0.38 +0.4 4,261,661 - CA264_18330 0.38 +2.0 4,261,661 - CA264_18330 0.38 +0.4 4,261,694 + CA264_18330 0.46 -0.0 4,261,739 + CA264_18330 0.56 -0.3 4,261,772 + CA264_18330 0.63 +0.3 4,261,853 - CA264_18330 0.81 -0.9 4,261,953 - +1.3 4,262,031 + +1.1 4,262,031 + -1.7 4,262,031 + -0.9 4,262,031 + -1.9 4,262,080 + -0.5 4,262,080 + -0.7 4,262,081 - -0.2 4,262,081 - -0.6 4,262,136 + -0.2 4,262,265 + CA264_18335 0.13 -0.1
Or see this region's nucleotide sequence