Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18000 and CA264_18005 are separated by 114 nucleotides CA264_18005 and CA264_18010 are separated by 349 nucleotides
CA264_18000: CA264_18000 - short-chain dehydrogenase, at 4,185,308 to 4,186,096
_18000
CA264_18005: CA264_18005 - 3-hydroxyanthranilate 3,4-dioxygenase, at 4,186,211 to 4,186,735
_18005
CA264_18010: CA264_18010 - 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase, at 4,187,085 to 4,188,122
_18010
Position (kb)
4186
4187 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4185.218 kb on + strand at 4185.228 kb on + strand at 4185.228 kb on + strand at 4185.243 kb on + strand at 4185.243 kb on + strand at 4185.244 kb on - strand at 4185.247 kb on - strand at 4185.247 kb on - strand at 4185.253 kb on + strand at 4185.336 kb on - strand at 4185.360 kb on + strand at 4185.458 kb on + strand, within CA264_18000 at 4185.505 kb on + strand, within CA264_18000 at 4185.505 kb on + strand, within CA264_18000 at 4185.511 kb on + strand, within CA264_18000 at 4185.512 kb on - strand, within CA264_18000 at 4185.512 kb on - strand, within CA264_18000 at 4185.552 kb on - strand, within CA264_18000 at 4185.560 kb on - strand, within CA264_18000 at 4185.657 kb on - strand, within CA264_18000 at 4185.706 kb on + strand, within CA264_18000 at 4185.706 kb on + strand, within CA264_18000 at 4185.708 kb on + strand, within CA264_18000 at 4185.708 kb on + strand, within CA264_18000 at 4185.709 kb on - strand, within CA264_18000 at 4185.792 kb on - strand, within CA264_18000 at 4185.792 kb on - strand, within CA264_18000 at 4185.835 kb on + strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.848 kb on + strand, within CA264_18000 at 4185.915 kb on + strand, within CA264_18000 at 4185.915 kb on + strand, within CA264_18000 at 4185.995 kb on - strand, within CA264_18000 at 4186.007 kb on + strand, within CA264_18000 at 4186.102 kb on - strand at 4186.158 kb on + strand at 4186.188 kb on - strand at 4186.198 kb on + strand at 4186.198 kb on + strand at 4186.199 kb on - strand at 4186.210 kb on + strand at 4186.210 kb on + strand at 4186.211 kb on - strand at 4186.324 kb on - strand, within CA264_18005 at 4186.329 kb on + strand, within CA264_18005 at 4186.329 kb on + strand, within CA264_18005 at 4186.342 kb on + strand, within CA264_18005 at 4186.343 kb on - strand, within CA264_18005 at 4186.405 kb on + strand, within CA264_18005 at 4186.603 kb on - strand, within CA264_18005 at 4186.603 kb on - strand, within CA264_18005 at 4186.603 kb on - strand, within CA264_18005 at 4186.603 kb on - strand, within CA264_18005 at 4186.624 kb on - strand, within CA264_18005 at 4186.624 kb on - strand, within CA264_18005 at 4186.789 kb on + strand at 4186.790 kb on - strand at 4186.850 kb on - strand at 4186.870 kb on - strand at 4186.870 kb on - strand at 4186.871 kb on + strand at 4186.900 kb on - strand at 4186.919 kb on + strand at 4186.920 kb on - strand at 4186.920 kb on - strand at 4186.920 kb on - strand at 4186.926 kb on + strand at 4186.926 kb on + strand at 4186.953 kb on + strand at 4186.954 kb on - strand at 4186.954 kb on - strand at 4186.963 kb on + strand at 4186.984 kb on - strand at 4186.984 kb on - strand at 4186.986 kb on - strand at 4187.004 kb on - strand at 4187.019 kb on - strand at 4187.021 kb on - strand at 4187.021 kb on - strand at 4187.027 kb on - strand at 4187.041 kb on - strand at 4187.065 kb on + strand at 4187.066 kb on - strand at 4187.098 kb on + strand at 4187.098 kb on + strand at 4187.099 kb on - strand at 4187.099 kb on - strand at 4187.099 kb on - strand at 4187.099 kb on - strand at 4187.099 kb on - strand at 4187.099 kb on - strand at 4187.099 kb on - strand at 4187.099 kb on - strand at 4187.213 kb on + strand, within CA264_18010 at 4187.294 kb on - strand, within CA264_18010 at 4187.324 kb on + strand, within CA264_18010 at 4187.325 kb on - strand, within CA264_18010 at 4187.329 kb on - strand, within CA264_18010 at 4187.352 kb on + strand, within CA264_18010 at 4187.352 kb on + strand, within CA264_18010 at 4187.353 kb on - strand, within CA264_18010 at 4187.353 kb on - strand, within CA264_18010 at 4187.353 kb on - strand, within CA264_18010 at 4187.506 kb on + strand, within CA264_18010 at 4187.616 kb on - strand, within CA264_18010 at 4187.643 kb on + strand, within CA264_18010 at 4187.684 kb on + strand, within CA264_18010 at 4187.685 kb on - strand, within CA264_18010 at 4187.685 kb on - strand, within CA264_18010 at 4187.685 kb on - strand, within CA264_18010
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 4,185,218 + -0.5 4,185,228 + -0.5 4,185,228 + -0.3 4,185,243 + -0.0 4,185,243 + -1.7 4,185,244 - -0.1 4,185,247 - +0.4 4,185,247 - +0.6 4,185,253 + +1.2 4,185,336 - -0.9 4,185,360 + -0.4 4,185,458 + CA264_18000 0.19 -0.2 4,185,505 + CA264_18000 0.25 -0.5 4,185,505 + CA264_18000 0.25 +0.5 4,185,511 + CA264_18000 0.26 -0.8 4,185,512 - CA264_18000 0.26 -0.3 4,185,512 - CA264_18000 0.26 -0.1 4,185,552 - CA264_18000 0.31 -1.1 4,185,560 - CA264_18000 0.32 -0.0 4,185,657 - CA264_18000 0.44 -1.0 4,185,706 + CA264_18000 0.50 +0.4 4,185,706 + CA264_18000 0.50 +0.3 4,185,708 + CA264_18000 0.51 -1.1 4,185,708 + CA264_18000 0.51 +0.4 4,185,709 - CA264_18000 0.51 -0.9 4,185,792 - CA264_18000 0.61 -0.2 4,185,792 - CA264_18000 0.61 -0.8 4,185,835 + CA264_18000 0.67 +0.1 4,185,836 - CA264_18000 0.67 +0.5 4,185,836 - CA264_18000 0.67 -1.2 4,185,836 - CA264_18000 0.67 +0.7 4,185,836 - CA264_18000 0.67 -1.1 4,185,848 + CA264_18000 0.68 -0.0 4,185,915 + CA264_18000 0.77 -0.0 4,185,915 + CA264_18000 0.77 -1.4 4,185,995 - CA264_18000 0.87 +0.9 4,186,007 + CA264_18000 0.89 -0.4 4,186,102 - -0.3 4,186,158 + -0.5 4,186,188 - -0.0 4,186,198 + +0.2 4,186,198 + -0.4 4,186,199 - -0.0 4,186,210 + +1.8 4,186,210 + +0.5 4,186,211 - +0.5 4,186,324 - CA264_18005 0.22 -0.1 4,186,329 + CA264_18005 0.22 +0.3 4,186,329 + CA264_18005 0.22 -0.1 4,186,342 + CA264_18005 0.25 +1.5 4,186,343 - CA264_18005 0.25 +0.4 4,186,405 + CA264_18005 0.37 +1.2 4,186,603 - CA264_18005 0.75 -2.0 4,186,603 - CA264_18005 0.75 +0.1 4,186,603 - CA264_18005 0.75 -0.6 4,186,603 - CA264_18005 0.75 +0.8 4,186,624 - CA264_18005 0.79 +1.8 4,186,624 - CA264_18005 0.79 +0.3 4,186,789 + -0.0 4,186,790 - +0.1 4,186,850 - -0.5 4,186,870 - +0.4 4,186,870 - -0.8 4,186,871 + +0.5 4,186,900 - +0.8 4,186,919 + +0.1 4,186,920 - +0.1 4,186,920 - +0.8 4,186,920 - +0.2 4,186,926 + +1.6 4,186,926 + +0.1 4,186,953 + +0.3 4,186,954 - -1.1 4,186,954 - +0.6 4,186,963 + +0.0 4,186,984 - -0.3 4,186,984 - +1.2 4,186,986 - +0.0 4,187,004 - +1.0 4,187,019 - -0.3 4,187,021 - -0.1 4,187,021 - +0.2 4,187,027 - +0.1 4,187,041 - -0.6 4,187,065 + -0.1 4,187,066 - +0.1 4,187,098 + +0.2 4,187,098 + -0.1 4,187,099 - -0.4 4,187,099 - +0.7 4,187,099 - -0.0 4,187,099 - -0.3 4,187,099 - +0.6 4,187,099 - -0.4 4,187,099 - +1.5 4,187,099 - -0.7 4,187,213 + CA264_18010 0.12 +1.1 4,187,294 - CA264_18010 0.20 +1.0 4,187,324 + CA264_18010 0.23 -0.7 4,187,325 - CA264_18010 0.23 -1.5 4,187,329 - CA264_18010 0.24 +0.1 4,187,352 + CA264_18010 0.26 +0.4 4,187,352 + CA264_18010 0.26 +0.0 4,187,353 - CA264_18010 0.26 -0.1 4,187,353 - CA264_18010 0.26 -0.8 4,187,353 - CA264_18010 0.26 -0.1 4,187,506 + CA264_18010 0.41 +0.1 4,187,616 - CA264_18010 0.51 +0.3 4,187,643 + CA264_18010 0.54 -0.0 4,187,684 + CA264_18010 0.58 +0.2 4,187,685 - CA264_18010 0.58 +3.4 4,187,685 - CA264_18010 0.58 +0.4 4,187,685 - CA264_18010 0.58 +0.0
Or see this region's nucleotide sequence