Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17915 and CA264_17920 are separated by 21 nucleotides CA264_17920 and CA264_17925 are separated by 62 nucleotides CA264_17925 and CA264_17930 are separated by 70 nucleotides
CA264_17915: CA264_17915 - LPS biosynthesis protein WbpP, at 4,164,761 to 4,165,786
_17915
CA264_17920: CA264_17920 - glucose-1-phosphate thymidylyltransferase, at 4,165,808 to 4,166,668
_17920
CA264_17925: CA264_17925 - chromate transporter, at 4,166,731 to 4,167,903
_17925
CA264_17930: CA264_17930 - flavonol synthase, at 4,167,974 to 4,168,957
_17930
Position (kb)
4166
4167
4168 Strain fitness (log2 ratio)
-1
0
1
2 at 4165.751 kb on - strand at 4165.785 kb on - strand at 4165.787 kb on + strand at 4165.804 kb on - strand at 4165.804 kb on - strand at 4165.805 kb on + strand at 4166.675 kb on - strand at 4166.678 kb on - strand at 4166.862 kb on - strand, within CA264_17925 at 4166.911 kb on - strand, within CA264_17925 at 4166.940 kb on - strand, within CA264_17925 at 4167.016 kb on + strand, within CA264_17925 at 4167.070 kb on - strand, within CA264_17925 at 4167.073 kb on + strand, within CA264_17925 at 4167.073 kb on + strand, within CA264_17925 at 4167.073 kb on + strand, within CA264_17925 at 4167.163 kb on - strand, within CA264_17925 at 4167.286 kb on + strand, within CA264_17925 at 4167.315 kb on - strand, within CA264_17925 at 4167.408 kb on + strand, within CA264_17925 at 4167.505 kb on + strand, within CA264_17925 at 4167.519 kb on - strand, within CA264_17925 at 4167.607 kb on - strand, within CA264_17925 at 4167.607 kb on - strand, within CA264_17925 at 4167.628 kb on - strand, within CA264_17925 at 4167.669 kb on - strand, within CA264_17925 at 4167.678 kb on + strand, within CA264_17925 at 4167.693 kb on + strand, within CA264_17925 at 4167.741 kb on + strand, within CA264_17925 at 4167.741 kb on + strand, within CA264_17925 at 4167.781 kb on - strand, within CA264_17925 at 4167.866 kb on - strand at 4167.869 kb on - strand at 4167.886 kb on - strand at 4167.886 kb on - strand at 4167.886 kb on - strand at 4167.887 kb on + strand at 4167.888 kb on - strand at 4167.888 kb on - strand at 4168.018 kb on - strand at 4168.018 kb on - strand at 4168.084 kb on + strand, within CA264_17930 at 4168.085 kb on - strand, within CA264_17930 at 4168.217 kb on - strand, within CA264_17930 at 4168.217 kb on - strand, within CA264_17930 at 4168.224 kb on - strand, within CA264_17930 at 4168.229 kb on + strand, within CA264_17930 at 4168.236 kb on - strand, within CA264_17930 at 4168.336 kb on + strand, within CA264_17930 at 4168.337 kb on - strand, within CA264_17930 at 4168.337 kb on - strand, within CA264_17930 at 4168.402 kb on - strand, within CA264_17930 at 4168.537 kb on + strand, within CA264_17930 at 4168.584 kb on + strand, within CA264_17930 at 4168.641 kb on + strand, within CA264_17930 at 4168.734 kb on + strand, within CA264_17930 at 4168.746 kb on - strand, within CA264_17930 at 4168.785 kb on + strand, within CA264_17930 at 4168.786 kb on - strand, within CA264_17930
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 4,165,751 - -0.2 4,165,785 - +0.2 4,165,787 + -0.1 4,165,804 - -0.6 4,165,804 - -0.5 4,165,805 + +1.8 4,166,675 - -1.0 4,166,678 - +0.2 4,166,862 - CA264_17925 0.11 -0.8 4,166,911 - CA264_17925 0.15 -0.8 4,166,940 - CA264_17925 0.18 +0.1 4,167,016 + CA264_17925 0.24 +0.3 4,167,070 - CA264_17925 0.29 -0.7 4,167,073 + CA264_17925 0.29 -0.4 4,167,073 + CA264_17925 0.29 +0.8 4,167,073 + CA264_17925 0.29 +1.5 4,167,163 - CA264_17925 0.37 +0.0 4,167,286 + CA264_17925 0.47 +0.9 4,167,315 - CA264_17925 0.50 -0.6 4,167,408 + CA264_17925 0.58 +1.0 4,167,505 + CA264_17925 0.66 -0.1 4,167,519 - CA264_17925 0.67 -0.1 4,167,607 - CA264_17925 0.75 -0.3 4,167,607 - CA264_17925 0.75 +0.1 4,167,628 - CA264_17925 0.76 -1.4 4,167,669 - CA264_17925 0.80 -0.1 4,167,678 + CA264_17925 0.81 +0.7 4,167,693 + CA264_17925 0.82 -0.2 4,167,741 + CA264_17925 0.86 +0.7 4,167,741 + CA264_17925 0.86 +0.1 4,167,781 - CA264_17925 0.90 -1.4 4,167,866 - +0.4 4,167,869 - +0.6 4,167,886 - +1.0 4,167,886 - +1.7 4,167,886 - -0.3 4,167,887 + +0.2 4,167,888 - +0.0 4,167,888 - -0.1 4,168,018 - +0.2 4,168,018 - +0.9 4,168,084 + CA264_17930 0.11 +0.0 4,168,085 - CA264_17930 0.11 +0.1 4,168,217 - CA264_17930 0.25 +0.4 4,168,217 - CA264_17930 0.25 +0.1 4,168,224 - CA264_17930 0.25 -0.5 4,168,229 + CA264_17930 0.26 +0.0 4,168,236 - CA264_17930 0.27 -0.7 4,168,336 + CA264_17930 0.37 -0.7 4,168,337 - CA264_17930 0.37 +0.1 4,168,337 - CA264_17930 0.37 +0.4 4,168,402 - CA264_17930 0.43 +1.2 4,168,537 + CA264_17930 0.57 -0.1 4,168,584 + CA264_17930 0.62 +0.7 4,168,641 + CA264_17930 0.68 +0.0 4,168,734 + CA264_17930 0.77 -0.6 4,168,746 - CA264_17930 0.78 -1.6 4,168,785 + CA264_17930 0.82 +0.4 4,168,786 - CA264_17930 0.83 +0.2
Or see this region's nucleotide sequence