Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17720 and CA264_17725 are separated by 147 nucleotides CA264_17725 and CA264_17730 are separated by 20 nucleotides
CA264_17720: CA264_17720 - beta-ketoadipyl CoA thiolase, at 4,122,624 to 4,123,823
_17720
CA264_17725: CA264_17725 - tRNA pseudouridine synthase A, at 4,123,971 to 4,124,723
_17725
CA264_17730: CA264_17730 - methionine gamma-lyase, at 4,124,744 to 4,126,051
_17730
Position (kb)
4123
4124
4125 Strain fitness (log2 ratio)
-1
0
1
2 at 4122.981 kb on - strand, within CA264_17720 at 4123.023 kb on + strand, within CA264_17720 at 4123.045 kb on - strand, within CA264_17720 at 4123.071 kb on - strand, within CA264_17720 at 4123.080 kb on - strand, within CA264_17720 at 4123.089 kb on - strand, within CA264_17720 at 4123.182 kb on - strand, within CA264_17720 at 4123.182 kb on - strand, within CA264_17720 at 4123.182 kb on - strand, within CA264_17720 at 4123.193 kb on - strand, within CA264_17720 at 4123.197 kb on + strand, within CA264_17720 at 4123.197 kb on + strand, within CA264_17720 at 4123.388 kb on - strand, within CA264_17720 at 4123.443 kb on - strand, within CA264_17720 at 4123.443 kb on - strand, within CA264_17720 at 4123.490 kb on - strand, within CA264_17720 at 4123.555 kb on + strand, within CA264_17720 at 4123.556 kb on - strand, within CA264_17720 at 4123.585 kb on + strand, within CA264_17720 at 4123.612 kb on + strand, within CA264_17720 at 4123.658 kb on - strand, within CA264_17720 at 4123.658 kb on - strand, within CA264_17720 at 4123.658 kb on - strand, within CA264_17720 at 4123.670 kb on + strand, within CA264_17720 at 4123.670 kb on + strand, within CA264_17720 at 4123.704 kb on - strand at 4123.765 kb on + strand at 4123.804 kb on + strand at 4123.810 kb on - strand at 4123.820 kb on - strand at 4123.821 kb on + strand at 4123.822 kb on - strand at 4123.822 kb on - strand at 4123.822 kb on - strand at 4123.960 kb on - strand at 4123.990 kb on + strand at 4124.071 kb on + strand, within CA264_17725 at 4124.075 kb on + strand, within CA264_17725 at 4124.080 kb on + strand, within CA264_17725 at 4124.080 kb on + strand, within CA264_17725 at 4124.124 kb on - strand, within CA264_17725 at 4124.192 kb on - strand, within CA264_17725 at 4124.244 kb on + strand, within CA264_17725 at 4124.245 kb on - strand, within CA264_17725 at 4124.301 kb on + strand, within CA264_17725 at 4124.337 kb on + strand, within CA264_17725 at 4124.340 kb on + strand, within CA264_17725 at 4124.341 kb on - strand, within CA264_17725 at 4124.397 kb on - strand, within CA264_17725 at 4124.397 kb on - strand, within CA264_17725 at 4124.397 kb on - strand, within CA264_17725 at 4124.405 kb on + strand, within CA264_17725 at 4124.406 kb on - strand, within CA264_17725 at 4124.543 kb on + strand, within CA264_17725 at 4124.544 kb on - strand, within CA264_17725 at 4124.634 kb on - strand, within CA264_17725 at 4124.671 kb on + strand at 4124.672 kb on - strand at 4124.673 kb on + strand at 4124.674 kb on - strand at 4124.702 kb on + strand at 4124.702 kb on + strand at 4124.703 kb on - strand at 4124.708 kb on - strand at 4124.734 kb on - strand at 4124.739 kb on + strand at 4124.740 kb on - strand at 4124.740 kb on - strand at 4124.740 kb on - strand at 4124.740 kb on - strand at 4124.743 kb on + strand at 4124.744 kb on - strand at 4124.751 kb on + strand at 4124.751 kb on + strand at 4124.778 kb on + strand at 4124.786 kb on - strand at 4124.808 kb on + strand at 4124.863 kb on + strand at 4124.863 kb on + strand at 4124.864 kb on - strand at 4124.864 kb on - strand at 4124.867 kb on + strand at 4124.930 kb on + strand, within CA264_17730 at 4124.964 kb on + strand, within CA264_17730 at 4124.964 kb on + strand, within CA264_17730 at 4124.964 kb on + strand, within CA264_17730 at 4124.965 kb on - strand, within CA264_17730 at 4125.006 kb on + strand, within CA264_17730 at 4125.118 kb on + strand, within CA264_17730 at 4125.136 kb on + strand, within CA264_17730 at 4125.136 kb on + strand, within CA264_17730 at 4125.137 kb on - strand, within CA264_17730 at 4125.140 kb on + strand, within CA264_17730 at 4125.140 kb on + strand, within CA264_17730 at 4125.141 kb on - strand, within CA264_17730 at 4125.158 kb on + strand, within CA264_17730 at 4125.159 kb on - strand, within CA264_17730 at 4125.159 kb on - strand, within CA264_17730 at 4125.170 kb on - strand, within CA264_17730 at 4125.179 kb on - strand, within CA264_17730 at 4125.187 kb on + strand, within CA264_17730 at 4125.196 kb on + strand, within CA264_17730 at 4125.232 kb on - strand, within CA264_17730 at 4125.279 kb on + strand, within CA264_17730 at 4125.280 kb on - strand, within CA264_17730 at 4125.280 kb on - strand, within CA264_17730 at 4125.281 kb on + strand, within CA264_17730 at 4125.281 kb on + strand, within CA264_17730 at 4125.282 kb on - strand, within CA264_17730 at 4125.282 kb on - strand, within CA264_17730 at 4125.337 kb on - strand, within CA264_17730 at 4125.378 kb on + strand, within CA264_17730 at 4125.378 kb on + strand, within CA264_17730 at 4125.379 kb on - strand, within CA264_17730 at 4125.391 kb on + strand, within CA264_17730 at 4125.391 kb on + strand, within CA264_17730 at 4125.391 kb on + strand, within CA264_17730 at 4125.394 kb on + strand, within CA264_17730 at 4125.395 kb on - strand, within CA264_17730 at 4125.450 kb on + strand, within CA264_17730 at 4125.451 kb on - strand, within CA264_17730 at 4125.452 kb on + strand, within CA264_17730 at 4125.452 kb on + strand, within CA264_17730 at 4125.468 kb on - strand, within CA264_17730 at 4125.695 kb on + strand, within CA264_17730 at 4125.696 kb on - strand, within CA264_17730 at 4125.698 kb on + strand, within CA264_17730 at 4125.699 kb on - strand, within CA264_17730
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 4,122,981 - CA264_17720 0.30 +1.2 4,123,023 + CA264_17720 0.33 +2.0 4,123,045 - CA264_17720 0.35 -0.2 4,123,071 - CA264_17720 0.37 -0.0 4,123,080 - CA264_17720 0.38 -1.1 4,123,089 - CA264_17720 0.39 +0.4 4,123,182 - CA264_17720 0.47 +0.8 4,123,182 - CA264_17720 0.47 +1.2 4,123,182 - CA264_17720 0.47 +2.3 4,123,193 - CA264_17720 0.47 -0.3 4,123,197 + CA264_17720 0.48 -0.1 4,123,197 + CA264_17720 0.48 +0.5 4,123,388 - CA264_17720 0.64 +0.0 4,123,443 - CA264_17720 0.68 -0.4 4,123,443 - CA264_17720 0.68 +0.0 4,123,490 - CA264_17720 0.72 -0.2 4,123,555 + CA264_17720 0.78 +0.8 4,123,556 - CA264_17720 0.78 -0.3 4,123,585 + CA264_17720 0.80 +0.1 4,123,612 + CA264_17720 0.82 +2.5 4,123,658 - CA264_17720 0.86 +0.3 4,123,658 - CA264_17720 0.86 -0.9 4,123,658 - CA264_17720 0.86 -1.4 4,123,670 + CA264_17720 0.87 -0.5 4,123,670 + CA264_17720 0.87 +1.1 4,123,704 - +0.3 4,123,765 + +0.5 4,123,804 + +0.1 4,123,810 - +0.2 4,123,820 - -0.5 4,123,821 + +0.3 4,123,822 - +0.8 4,123,822 - -0.4 4,123,822 - -1.2 4,123,960 - +0.1 4,123,990 + +0.2 4,124,071 + CA264_17725 0.13 -0.4 4,124,075 + CA264_17725 0.14 +0.2 4,124,080 + CA264_17725 0.14 -0.4 4,124,080 + CA264_17725 0.14 +0.6 4,124,124 - CA264_17725 0.20 -0.5 4,124,192 - CA264_17725 0.29 -0.5 4,124,244 + CA264_17725 0.36 -0.7 4,124,245 - CA264_17725 0.36 +0.5 4,124,301 + CA264_17725 0.44 -0.1 4,124,337 + CA264_17725 0.49 -0.5 4,124,340 + CA264_17725 0.49 -1.6 4,124,341 - CA264_17725 0.49 -0.3 4,124,397 - CA264_17725 0.57 +0.1 4,124,397 - CA264_17725 0.57 -0.7 4,124,397 - CA264_17725 0.57 -0.6 4,124,405 + CA264_17725 0.58 +0.5 4,124,406 - CA264_17725 0.58 -0.1 4,124,543 + CA264_17725 0.76 -0.5 4,124,544 - CA264_17725 0.76 -0.3 4,124,634 - CA264_17725 0.88 +1.2 4,124,671 + -0.0 4,124,672 - +0.4 4,124,673 + -0.6 4,124,674 - +0.5 4,124,702 + -0.7 4,124,702 + -0.8 4,124,703 - -0.1 4,124,708 - +0.6 4,124,734 - +0.2 4,124,739 + +0.2 4,124,740 - +0.2 4,124,740 - -0.5 4,124,740 - -0.6 4,124,740 - +2.2 4,124,743 + +0.4 4,124,744 - -0.8 4,124,751 + -1.1 4,124,751 + -0.8 4,124,778 + +0.1 4,124,786 - +1.2 4,124,808 + +1.0 4,124,863 + +1.0 4,124,863 + -0.3 4,124,864 - +1.8 4,124,864 - +0.2 4,124,867 + +0.5 4,124,930 + CA264_17730 0.14 +0.5 4,124,964 + CA264_17730 0.17 -0.1 4,124,964 + CA264_17730 0.17 -0.3 4,124,964 + CA264_17730 0.17 -0.7 4,124,965 - CA264_17730 0.17 -0.2 4,125,006 + CA264_17730 0.20 +0.4 4,125,118 + CA264_17730 0.29 -0.8 4,125,136 + CA264_17730 0.30 -0.2 4,125,136 + CA264_17730 0.30 -0.3 4,125,137 - CA264_17730 0.30 -0.8 4,125,140 + CA264_17730 0.30 +1.6 4,125,140 + CA264_17730 0.30 +0.4 4,125,141 - CA264_17730 0.30 -0.2 4,125,158 + CA264_17730 0.32 +0.5 4,125,159 - CA264_17730 0.32 -0.4 4,125,159 - CA264_17730 0.32 -0.3 4,125,170 - CA264_17730 0.33 +0.7 4,125,179 - CA264_17730 0.33 -0.0 4,125,187 + CA264_17730 0.34 +1.3 4,125,196 + CA264_17730 0.35 -0.7 4,125,232 - CA264_17730 0.37 +0.5 4,125,279 + CA264_17730 0.41 -0.9 4,125,280 - CA264_17730 0.41 -0.1 4,125,280 - CA264_17730 0.41 -0.3 4,125,281 + CA264_17730 0.41 -0.5 4,125,281 + CA264_17730 0.41 +0.1 4,125,282 - CA264_17730 0.41 +0.6 4,125,282 - CA264_17730 0.41 -0.4 4,125,337 - CA264_17730 0.45 +0.1 4,125,378 + CA264_17730 0.48 -0.2 4,125,378 + CA264_17730 0.48 -0.2 4,125,379 - CA264_17730 0.49 -0.1 4,125,391 + CA264_17730 0.49 +0.4 4,125,391 + CA264_17730 0.49 +0.0 4,125,391 + CA264_17730 0.49 -0.8 4,125,394 + CA264_17730 0.50 -0.4 4,125,395 - CA264_17730 0.50 +0.0 4,125,450 + CA264_17730 0.54 +0.5 4,125,451 - CA264_17730 0.54 -0.3 4,125,452 + CA264_17730 0.54 -0.3 4,125,452 + CA264_17730 0.54 -0.1 4,125,468 - CA264_17730 0.55 -0.4 4,125,695 + CA264_17730 0.73 +0.7 4,125,696 - CA264_17730 0.73 -0.9 4,125,698 + CA264_17730 0.73 -0.3 4,125,699 - CA264_17730 0.73 -0.3
Or see this region's nucleotide sequence