Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17340 and CA264_17345 are separated by 46 nucleotides CA264_17345 and CA264_17350 are separated by 67 nucleotides
CA264_17340: CA264_17340 - hypothetical protein, at 4,041,672 to 4,042,439
_17340
CA264_17345: CA264_17345 - ABC transporter ATP-binding protein, at 4,042,486 to 4,044,300
_17345
CA264_17350: CA264_17350 - hypothetical protein, at 4,044,368 to 4,045,135
_17350
Position (kb)
4042
4043
4044
4045 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4041.503 kb on + strand at 4041.504 kb on - strand at 4041.549 kb on - strand at 4041.572 kb on - strand at 4041.572 kb on - strand at 4041.611 kb on - strand at 4041.619 kb on - strand at 4041.619 kb on - strand at 4041.628 kb on + strand at 4041.628 kb on + strand at 4041.628 kb on + strand at 4041.629 kb on - strand at 4041.629 kb on - strand at 4041.629 kb on - strand at 4041.633 kb on - strand at 4041.671 kb on - strand at 4041.680 kb on - strand at 4041.816 kb on + strand, within CA264_17340 at 4041.816 kb on + strand, within CA264_17340 at 4041.817 kb on - strand, within CA264_17340 at 4041.817 kb on - strand, within CA264_17340 at 4041.820 kb on + strand, within CA264_17340 at 4041.820 kb on + strand, within CA264_17340 at 4041.821 kb on - strand, within CA264_17340 at 4041.821 kb on - strand, within CA264_17340 at 4041.834 kb on - strand, within CA264_17340 at 4041.834 kb on - strand, within CA264_17340 at 4041.834 kb on - strand, within CA264_17340 at 4041.852 kb on + strand, within CA264_17340 at 4041.853 kb on - strand, within CA264_17340 at 4041.869 kb on + strand, within CA264_17340 at 4041.872 kb on + strand, within CA264_17340 at 4041.872 kb on + strand, within CA264_17340 at 4041.873 kb on - strand, within CA264_17340 at 4041.884 kb on - strand, within CA264_17340 at 4041.942 kb on + strand, within CA264_17340 at 4041.942 kb on + strand, within CA264_17340 at 4041.945 kb on + strand, within CA264_17340 at 4041.945 kb on + strand, within CA264_17340 at 4041.945 kb on + strand, within CA264_17340 at 4041.946 kb on - strand, within CA264_17340 at 4041.946 kb on - strand, within CA264_17340 at 4041.948 kb on - strand, within CA264_17340 at 4041.970 kb on + strand, within CA264_17340 at 4041.971 kb on - strand, within CA264_17340 at 4041.980 kb on - strand, within CA264_17340 at 4042.014 kb on + strand, within CA264_17340 at 4042.015 kb on - strand, within CA264_17340 at 4042.153 kb on - strand, within CA264_17340 at 4042.153 kb on - strand, within CA264_17340 at 4042.181 kb on + strand, within CA264_17340 at 4042.202 kb on - strand, within CA264_17340 at 4042.209 kb on + strand, within CA264_17340 at 4042.209 kb on + strand, within CA264_17340 at 4042.209 kb on + strand, within CA264_17340 at 4042.209 kb on + strand, within CA264_17340 at 4042.211 kb on + strand, within CA264_17340 at 4042.211 kb on + strand, within CA264_17340 at 4042.212 kb on - strand, within CA264_17340 at 4042.215 kb on + strand, within CA264_17340 at 4042.215 kb on + strand, within CA264_17340 at 4042.216 kb on - strand, within CA264_17340 at 4042.255 kb on + strand, within CA264_17340 at 4042.256 kb on - strand, within CA264_17340 at 4042.279 kb on + strand, within CA264_17340 at 4042.279 kb on + strand, within CA264_17340 at 4042.279 kb on + strand, within CA264_17340 at 4042.279 kb on + strand, within CA264_17340 at 4042.280 kb on - strand, within CA264_17340 at 4042.281 kb on + strand, within CA264_17340 at 4042.286 kb on + strand, within CA264_17340 at 4042.286 kb on + strand, within CA264_17340 at 4042.287 kb on - strand, within CA264_17340 at 4042.350 kb on + strand, within CA264_17340 at 4042.350 kb on + strand, within CA264_17340 at 4042.354 kb on + strand, within CA264_17340 at 4042.354 kb on + strand, within CA264_17340 at 4042.354 kb on + strand, within CA264_17340 at 4042.354 kb on + strand, within CA264_17340 at 4042.355 kb on - strand, within CA264_17340 at 4042.355 kb on - strand, within CA264_17340 at 4042.365 kb on + strand at 4042.365 kb on + strand at 4042.366 kb on - strand at 4042.366 kb on - strand at 4042.390 kb on + strand at 4042.390 kb on + strand at 4042.390 kb on + strand at 4042.393 kb on - strand at 4042.393 kb on - strand at 4042.399 kb on - strand at 4042.406 kb on + strand at 4042.466 kb on - strand at 4042.502 kb on + strand at 4042.502 kb on + strand at 4042.503 kb on - strand at 4042.554 kb on + strand at 4042.584 kb on - strand at 4042.608 kb on - strand at 4042.650 kb on + strand at 4042.651 kb on - strand at 4042.728 kb on - strand, within CA264_17345 at 4042.728 kb on - strand, within CA264_17345 at 4042.874 kb on + strand, within CA264_17345 at 4042.905 kb on - strand, within CA264_17345 at 4043.118 kb on + strand, within CA264_17345 at 4043.119 kb on - strand, within CA264_17345 at 4043.191 kb on + strand, within CA264_17345 at 4043.192 kb on - strand, within CA264_17345 at 4043.236 kb on - strand, within CA264_17345 at 4043.445 kb on + strand, within CA264_17345 at 4043.445 kb on + strand, within CA264_17345 at 4043.488 kb on + strand, within CA264_17345 at 4043.565 kb on - strand, within CA264_17345 at 4044.009 kb on - strand, within CA264_17345 at 4044.203 kb on - strand at 4044.216 kb on + strand at 4044.218 kb on + strand at 4044.218 kb on + strand at 4044.219 kb on - strand at 4044.250 kb on - strand at 4044.252 kb on - strand at 4044.299 kb on - strand at 4044.367 kb on + strand at 4044.368 kb on - strand at 4044.383 kb on + strand at 4044.383 kb on + strand at 4044.383 kb on + strand at 4044.417 kb on + strand at 4044.417 kb on + strand at 4044.417 kb on + strand at 4044.418 kb on - strand at 4044.418 kb on - strand at 4044.418 kb on - strand at 4044.418 kb on - strand at 4044.436 kb on + strand at 4044.444 kb on + strand at 4044.465 kb on + strand, within CA264_17350 at 4044.466 kb on - strand, within CA264_17350 at 4044.574 kb on - strand, within CA264_17350 at 4044.574 kb on - strand, within CA264_17350 at 4044.574 kb on - strand, within CA264_17350 at 4044.620 kb on + strand, within CA264_17350 at 4044.621 kb on - strand, within CA264_17350 at 4044.660 kb on - strand, within CA264_17350 at 4044.692 kb on - strand, within CA264_17350 at 4044.735 kb on - strand, within CA264_17350 at 4044.779 kb on - strand, within CA264_17350 at 4044.926 kb on + strand, within CA264_17350 at 4044.926 kb on + strand, within CA264_17350 at 4044.926 kb on + strand, within CA264_17350 at 4044.996 kb on - strand, within CA264_17350 at 4045.014 kb on + strand, within CA264_17350 at 4045.015 kb on - strand, within CA264_17350 at 4045.015 kb on - strand, within CA264_17350 at 4045.032 kb on + strand, within CA264_17350 at 4045.033 kb on - strand, within CA264_17350 at 4045.033 kb on - strand, within CA264_17350 at 4045.045 kb on + strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.046 kb on - strand, within CA264_17350 at 4045.048 kb on - strand, within CA264_17350 at 4045.133 kb on + strand at 4045.134 kb on - strand at 4045.134 kb on - strand at 4045.257 kb on - strand at 4045.257 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 4,041,503 + -0.7 4,041,504 - -0.9 4,041,549 - +0.0 4,041,572 - -1.0 4,041,572 - -0.3 4,041,611 - -0.4 4,041,619 - -0.7 4,041,619 - -1.0 4,041,628 + +0.5 4,041,628 + -0.7 4,041,628 + -0.9 4,041,629 - -1.4 4,041,629 - -0.4 4,041,629 - -0.6 4,041,633 - -0.5 4,041,671 - -0.4 4,041,680 - -0.3 4,041,816 + CA264_17340 0.19 -0.7 4,041,816 + CA264_17340 0.19 -0.6 4,041,817 - CA264_17340 0.19 -0.3 4,041,817 - CA264_17340 0.19 -0.7 4,041,820 + CA264_17340 0.19 -0.9 4,041,820 + CA264_17340 0.19 -1.6 4,041,821 - CA264_17340 0.19 -0.3 4,041,821 - CA264_17340 0.19 -0.3 4,041,834 - CA264_17340 0.21 +0.6 4,041,834 - CA264_17340 0.21 +0.1 4,041,834 - CA264_17340 0.21 -1.2 4,041,852 + CA264_17340 0.23 +0.8 4,041,853 - CA264_17340 0.24 -1.0 4,041,869 + CA264_17340 0.26 -1.0 4,041,872 + CA264_17340 0.26 -2.2 4,041,872 + CA264_17340 0.26 -1.2 4,041,873 - CA264_17340 0.26 +0.6 4,041,884 - CA264_17340 0.28 -0.4 4,041,942 + CA264_17340 0.35 -1.1 4,041,942 + CA264_17340 0.35 -0.7 4,041,945 + CA264_17340 0.36 +0.1 4,041,945 + CA264_17340 0.36 -1.5 4,041,945 + CA264_17340 0.36 +0.8 4,041,946 - CA264_17340 0.36 -0.5 4,041,946 - CA264_17340 0.36 -0.4 4,041,948 - CA264_17340 0.36 -0.2 4,041,970 + CA264_17340 0.39 +1.4 4,041,971 - CA264_17340 0.39 -0.5 4,041,980 - CA264_17340 0.40 -0.3 4,042,014 + CA264_17340 0.45 -0.7 4,042,015 - CA264_17340 0.45 -0.1 4,042,153 - CA264_17340 0.63 -0.0 4,042,153 - CA264_17340 0.63 -0.9 4,042,181 + CA264_17340 0.66 -0.8 4,042,202 - CA264_17340 0.69 -0.7 4,042,209 + CA264_17340 0.70 -0.5 4,042,209 + CA264_17340 0.70 -0.1 4,042,209 + CA264_17340 0.70 -1.2 4,042,209 + CA264_17340 0.70 -0.5 4,042,211 + CA264_17340 0.70 +0.1 4,042,211 + CA264_17340 0.70 -0.6 4,042,212 - CA264_17340 0.70 -0.0 4,042,215 + CA264_17340 0.71 -1.3 4,042,215 + CA264_17340 0.71 +1.4 4,042,216 - CA264_17340 0.71 -0.7 4,042,255 + CA264_17340 0.76 -0.6 4,042,256 - CA264_17340 0.76 -0.1 4,042,279 + CA264_17340 0.79 -0.1 4,042,279 + CA264_17340 0.79 +0.5 4,042,279 + CA264_17340 0.79 -1.1 4,042,279 + CA264_17340 0.79 -0.3 4,042,280 - CA264_17340 0.79 -0.6 4,042,281 + CA264_17340 0.79 +0.8 4,042,286 + CA264_17340 0.80 -0.5 4,042,286 + CA264_17340 0.80 +0.4 4,042,287 - CA264_17340 0.80 +1.1 4,042,350 + CA264_17340 0.88 -0.6 4,042,350 + CA264_17340 0.88 -0.9 4,042,354 + CA264_17340 0.89 -0.5 4,042,354 + CA264_17340 0.89 -0.5 4,042,354 + CA264_17340 0.89 -0.5 4,042,354 + CA264_17340 0.89 -0.5 4,042,355 - CA264_17340 0.89 +2.5 4,042,355 - CA264_17340 0.89 -0.3 4,042,365 + +0.4 4,042,365 + -0.2 4,042,366 - -1.2 4,042,366 - -0.4 4,042,390 + -0.1 4,042,390 + -0.2 4,042,390 + -0.8 4,042,393 - +0.2 4,042,393 - -0.5 4,042,399 - -0.5 4,042,406 + -0.3 4,042,466 - -0.2 4,042,502 + +0.6 4,042,502 + -0.1 4,042,503 - -0.9 4,042,554 + -0.8 4,042,584 - -0.1 4,042,608 - +0.2 4,042,650 + -0.3 4,042,651 - -0.4 4,042,728 - CA264_17345 0.13 -0.5 4,042,728 - CA264_17345 0.13 +0.0 4,042,874 + CA264_17345 0.21 -0.5 4,042,905 - CA264_17345 0.23 -0.6 4,043,118 + CA264_17345 0.35 -0.1 4,043,119 - CA264_17345 0.35 +0.4 4,043,191 + CA264_17345 0.39 -0.6 4,043,192 - CA264_17345 0.39 -0.3 4,043,236 - CA264_17345 0.41 -0.5 4,043,445 + CA264_17345 0.53 -0.5 4,043,445 + CA264_17345 0.53 -1.5 4,043,488 + CA264_17345 0.55 -0.8 4,043,565 - CA264_17345 0.59 -0.3 4,044,009 - CA264_17345 0.84 -0.4 4,044,203 - +0.2 4,044,216 + -1.3 4,044,218 + -1.7 4,044,218 + -0.4 4,044,219 - -0.3 4,044,250 - -0.7 4,044,252 - -0.7 4,044,299 - -1.1 4,044,367 + -0.6 4,044,368 - -0.4 4,044,383 + -0.5 4,044,383 + -0.3 4,044,383 + -0.7 4,044,417 + -1.4 4,044,417 + -0.3 4,044,417 + -0.8 4,044,418 - -0.5 4,044,418 - -1.3 4,044,418 - -0.4 4,044,418 - -0.5 4,044,436 + -0.4 4,044,444 + +0.7 4,044,465 + CA264_17350 0.13 -1.0 4,044,466 - CA264_17350 0.13 -0.7 4,044,574 - CA264_17350 0.27 -0.3 4,044,574 - CA264_17350 0.27 +0.8 4,044,574 - CA264_17350 0.27 -1.2 4,044,620 + CA264_17350 0.33 -0.1 4,044,621 - CA264_17350 0.33 -1.6 4,044,660 - CA264_17350 0.38 +0.9 4,044,692 - CA264_17350 0.42 -1.3 4,044,735 - CA264_17350 0.48 +0.5 4,044,779 - CA264_17350 0.54 -0.4 4,044,926 + CA264_17350 0.73 -1.2 4,044,926 + CA264_17350 0.73 -0.3 4,044,926 + CA264_17350 0.73 -0.0 4,044,996 - CA264_17350 0.82 +0.2 4,045,014 + CA264_17350 0.84 +0.3 4,045,015 - CA264_17350 0.84 +0.8 4,045,015 - CA264_17350 0.84 -0.0 4,045,032 + CA264_17350 0.86 -1.6 4,045,033 - CA264_17350 0.87 -1.0 4,045,033 - CA264_17350 0.87 -0.8 4,045,045 + CA264_17350 0.88 -0.9 4,045,046 - CA264_17350 0.88 +0.9 4,045,046 - CA264_17350 0.88 -0.4 4,045,046 - CA264_17350 0.88 -1.8 4,045,046 - CA264_17350 0.88 +0.2 4,045,046 - CA264_17350 0.88 -0.3 4,045,046 - CA264_17350 0.88 +0.1 4,045,048 - CA264_17350 0.89 -0.1 4,045,133 + -0.6 4,045,134 - -0.6 4,045,134 - -1.5 4,045,257 - -1.5 4,045,257 - +0.2
Or see this region's nucleotide sequence