Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15145 and CA264_15150 are separated by 9 nucleotides CA264_15150 and CA264_15155 overlap by 92 nucleotides CA264_15155 and CA264_15160 are separated by 169 nucleotides CA264_15160 and CA264_15165 are separated by 514 nucleotides
CA264_15145: CA264_15145 - phosphoglucosamine mutase, at 3,551,972 to 3,553,363
_15145
CA264_15150: CA264_15150 - hypothetical protein, at 3,553,373 to 3,553,627
_15150
CA264_15155: CA264_15155 - hypothetical protein, at 3,553,536 to 3,553,796
_15155
CA264_15160: CA264_15160 - nucleoside triphosphate pyrophosphohydrolase, at 3,553,966 to 3,554,775
_15160
CA264_15165: CA264_15165 - flagellar motor protein MotA, at 3,555,290 to 3,556,156
_15165
Position (kb)
3553
3554
3555 Strain fitness (log2 ratio)
-2
-1
0
1 at 3553.370 kb on + strand at 3553.371 kb on - strand at 3553.371 kb on - strand at 3553.371 kb on - strand at 3553.372 kb on + strand at 3553.372 kb on + strand at 3553.403 kb on - strand, within CA264_15150 at 3553.406 kb on + strand, within CA264_15150 at 3553.408 kb on + strand, within CA264_15150 at 3553.409 kb on - strand, within CA264_15150 at 3553.409 kb on - strand, within CA264_15150 at 3553.422 kb on + strand, within CA264_15150 at 3553.537 kb on + strand at 3553.626 kb on - strand at 3553.741 kb on - strand, within CA264_15155 at 3553.796 kb on + strand at 3553.800 kb on - strand at 3553.802 kb on - strand at 3553.802 kb on - strand at 3553.802 kb on - strand at 3553.802 kb on - strand at 3553.802 kb on - strand at 3553.806 kb on + strand at 3553.806 kb on + strand at 3553.806 kb on + strand at 3553.808 kb on + strand at 3553.809 kb on - strand at 3553.809 kb on - strand at 3553.809 kb on - strand at 3553.809 kb on - strand at 3553.908 kb on - strand at 3553.938 kb on - strand at 3553.942 kb on + strand at 3554.119 kb on + strand, within CA264_15160 at 3554.120 kb on - strand, within CA264_15160 at 3554.120 kb on - strand, within CA264_15160 at 3554.162 kb on + strand, within CA264_15160 at 3554.184 kb on + strand, within CA264_15160 at 3554.184 kb on + strand, within CA264_15160 at 3554.185 kb on - strand, within CA264_15160 at 3554.185 kb on - strand, within CA264_15160 at 3554.415 kb on - strand, within CA264_15160 at 3554.430 kb on - strand, within CA264_15160 at 3554.505 kb on - strand, within CA264_15160 at 3554.505 kb on - strand, within CA264_15160 at 3554.526 kb on + strand, within CA264_15160 at 3554.527 kb on - strand, within CA264_15160 at 3554.531 kb on + strand, within CA264_15160 at 3554.790 kb on + strand at 3554.808 kb on - strand at 3554.864 kb on + strand at 3554.869 kb on + strand at 3554.936 kb on - strand at 3554.942 kb on + strand at 3555.021 kb on + strand at 3555.059 kb on + strand at 3555.060 kb on - strand at 3555.112 kb on + strand at 3555.152 kb on + strand at 3555.157 kb on + strand at 3555.158 kb on - strand at 3555.158 kb on - strand at 3555.160 kb on + strand at 3555.230 kb on - strand at 3555.325 kb on + strand at 3555.331 kb on - strand at 3555.352 kb on - strand at 3555.407 kb on - strand, within CA264_15165 at 3555.482 kb on + strand, within CA264_15165 at 3555.622 kb on + strand, within CA264_15165 at 3555.623 kb on - strand, within CA264_15165 at 3555.623 kb on - strand, within CA264_15165
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,553,370 + -0.2 3,553,371 - +0.4 3,553,371 - -0.6 3,553,371 - -0.0 3,553,372 + -1.6 3,553,372 + +0.8 3,553,403 - CA264_15150 0.12 +0.9 3,553,406 + CA264_15150 0.13 -0.7 3,553,408 + CA264_15150 0.14 -0.1 3,553,409 - CA264_15150 0.14 -0.3 3,553,409 - CA264_15150 0.14 -0.5 3,553,422 + CA264_15150 0.19 -1.4 3,553,537 + -0.9 3,553,626 - -1.3 3,553,741 - CA264_15155 0.79 +0.4 3,553,796 + +0.2 3,553,800 - -1.7 3,553,802 - -1.5 3,553,802 - -0.5 3,553,802 - -1.3 3,553,802 - -1.1 3,553,802 - +0.8 3,553,806 + -1.1 3,553,806 + +0.5 3,553,806 + -1.0 3,553,808 + -0.3 3,553,809 - -0.3 3,553,809 - -0.7 3,553,809 - +0.2 3,553,809 - +0.2 3,553,908 - -1.5 3,553,938 - -0.2 3,553,942 + -0.1 3,554,119 + CA264_15160 0.19 -0.7 3,554,120 - CA264_15160 0.19 -1.2 3,554,120 - CA264_15160 0.19 -1.2 3,554,162 + CA264_15160 0.24 -0.5 3,554,184 + CA264_15160 0.27 +0.7 3,554,184 + CA264_15160 0.27 +0.5 3,554,185 - CA264_15160 0.27 -0.6 3,554,185 - CA264_15160 0.27 +0.1 3,554,415 - CA264_15160 0.55 -1.2 3,554,430 - CA264_15160 0.57 -1.9 3,554,505 - CA264_15160 0.67 -2.7 3,554,505 - CA264_15160 0.67 -0.7 3,554,526 + CA264_15160 0.69 -0.1 3,554,527 - CA264_15160 0.69 +0.1 3,554,531 + CA264_15160 0.70 -0.6 3,554,790 + +1.5 3,554,808 - -1.3 3,554,864 + -0.1 3,554,869 + -0.8 3,554,936 - +0.9 3,554,942 + -0.3 3,555,021 + -0.1 3,555,059 + -0.1 3,555,060 - -0.7 3,555,112 + +0.4 3,555,152 + -0.8 3,555,157 + +0.9 3,555,158 - -0.6 3,555,158 - +0.6 3,555,160 + -0.8 3,555,230 - +0.3 3,555,325 + -2.5 3,555,331 - -2.7 3,555,352 - -1.6 3,555,407 - CA264_15165 0.13 -2.5 3,555,482 + CA264_15165 0.22 -0.9 3,555,622 + CA264_15165 0.38 -1.2 3,555,623 - CA264_15165 0.38 -1.9 3,555,623 - CA264_15165 0.38 -2.7
Or see this region's nucleotide sequence